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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:5408615..5411071- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004486-T1 ID=KJC3_004486-T1|Name=KJC3_004486-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2457bp|location=Sequence derived from alignment at ch3:5408615..5411071- (Aspergillus niger KJC3)
ATGAGTTTCTCGGCAGTTTTGGCGAGCACAGTGTGCCTGGCCTCATGTGC
CGCTTCTGGCGAGCCATCTCTGTGCACGATCACCATCTTGCCGCTTACTC
TCTTGGTGGGTCTGGCTGCCATCGGTCGCATCTTCCAGAGCAATTCGGCG
GTTGAAGACATGGTCCAGGATGCGCCCATGGGCAGAAGACGTATGCGCCA
AGGGGTCAGCCGTTCAGCACATCCCGCAAGGGAGGCCTGACTGGTAAGCG
TCATTGGTGCCCTACCCTGTGATCTTCCCCAAGTGGAGATGCTGATCTTT
CATGGTTCGGGAAGGTTTTGATCTTCAGCAGCCCACTGAGTCCAGCTTTC
CGGTACCGAAGCGATCCGTGCACACTAATTCCTGAACGTTGGCCATGTAG
GAACTGTGATGCGATGCGGCGAAACGTGATGTATATAGCGATGCTCTACA
ATGTTTTCCGGTTTCCCTGACCTATTTTTCCCAACTACTTCTGTTTCGGC
GTTTCCTTGGATCCCTAGCTGCTTGCATATATCAATATACAGGGTAACTA
CATCCTGTGACATATTAAACGTATTTCACGTGATTGTTCAGCCGAAAACA
GACGTACGCAGATGGACAGAGCGGTACAAACATACCAGATATCCGCCTTG
CTTCTACTCCTTGCGTATCTGATAGCCCTGTAGTGTGTGGGGAAGAGGGC
TGTTTGATCCATGTGACGTCAACCGGTAGATTCGTACAACACAAGTGTAG
ATCAAGCCATTGGTTTTCCCTGTCTTCGCTTCTTATTAGGCTTGATGGTC
CTTGAAGCCAACCAGAGTACGACGAGGCGAGCATGACACAACCTCGAGCC
TTGCCGCCGAGTCCTCCTCGGACAATATCAAGACTCAATAACCCCGTGAA
GTGGTGCACGGGATAAGGTTCGCCCTAATCAGACATGTTATTTTCATATG
TATATGCATGCGACCGTGCTCCCCGTGGCTGCATTCCTTCAAGAACCGGG
AATGGGATTAGGGGCCACTCAGGGCCCAGTTGCATCTCGGACGGATATTA
TATCCGCAGGGCGCGTTGGGTGCCCCTCCAGGCCCAAGCGTGACAGTTCC
AGCTCTTGACGGGTGGAGCAGAGAACTTACCGCCTATGATATGGAGGTCT
CCAAAACAATGACGACTTCTAAATCTGACTTTCAACGGACCTTCTCCGTA
GATCCTATTGTTCGGCCCTAGGATGTCCATCTTTGCGAAAGAAAGCTGTG
CCAAATGGTCGAACCGTACTCTGTCTCCACCAATCAGCAAAGAAAATGGT
TCGTATGATGATATGTGGAGTTAATTTACATGTCTTTCTTGCGTGCTGTC
GGGGTTCCTACCTTGTTCGAGAATGACTGGGAACGGCCTGCATCTCAATT
GACGAATTATGCCTTATTACAGTGTAGATGCTCACCGCAATGTGTCGATT
CCCGCTTCTACAGCGATGTGAGGGCTGTTGTTGCGCTTTGACGCGCGCGC
TGCAAGACACAAGTACATTTCCTGGGGATTTGGTCCGTTGCAAGACGACC
GTTGACCGAGAAGGTAGCCGGTCAGCTCTCCGAAGGCATGAAGATCGTGA
CTGATCACCGCAAGACTTGGAAGCCCACCATTGGCTTGCAGTTGTTCGAT
GCTCGCAACCCCGTGGGCATCTATGATCCACACATGCGGGCCGCCATCTT
CCACGAATGTCTGGCCTGGACTCATGATCTGAGAGACCTTCCTGATCCCG
AGCTCCTCGCCACAGCGGCTCCCAGCCGTTTGGGCTTCCTGCCTCGTGGT
GAATACCTCCTTCGTGCCCTGAGAGAGACATTCGACGCCCCAGATACGCC
CTTCTGGCACGCCGTGGCAGAGCAAGTCTACGGCTTCACCTGGTGTCCGT
CCGACAACACCAAACTTTGTCATGGATGCGTGCACGGGAGCTGCAGGGCC
GGCATGTTGGCCTGCTTCCCAGATTATCTCCACTTCCTCGGCGAATTGGC
CTGGCAGATTTACATGGCGCGGTATCAGACCGGGCTGTTGCTGGACAAAT
TGATGCCTCCGCGCAAGGACAGCCCCGGTGTCGGGGTGGATCCGTACGGC
GATGCGGTGCTCAATGCCATGAATCCCATGTTGAAGGCCGTGGGACGCAG
CGCCCAGCCGGGGAACTATTCACTGCGAGACCGGTGCCAGAACCCGCAAC
GCTACGATGACCTGCTCCAGCACTGCGTGCTCCACTTCAAGGAGTGTCCG
AGATGCCGGGGTTACGATGCGATGACCTGGCAGGAGCGGGTGCCGGCCAT
CGGAGAGGTGTATGAGAATAAGTATACGGACTGCAGCTGCATGAACCTCA
TCAGTGCGTATATGATCCTCACCTCGCCCGATCGGCTGTGGTGGTTGGCG
GACCCGACGGCCGAGTATACTGGGCCTCAAGAGGAGTGGTCGGCGCTGCT
CTGCTAG back to topCoding sequence (CDS) from alignment at ch3:5408615..5411071- >KJC3_004486-T1 ID=KJC3_004486-T1|Name=KJC3_004486-T1|organism=Aspergillus niger KJC3|type=CDS|length=2160bp|location=Sequence derived from alignment at ch3:5408615..5411071- (Aspergillus niger KJC3)
CCGGTCAGCTCTCCGAAGGCATGAAGATCGTGACTGATCACCGCAAGACT
TGGAAGCCCACCATTGGCTTGCAGTTGTTCGATGCTCGCAACCCCGTGGG
CATCTATGATCCACACATGCGGGCCGCCATCTTCCACGAATGTCTGGCCT
GGACTCATGATCTGAGAGACCTTCCTGATCCCGAGCTCCTCGCCACAGCG
GCTCCCAGCCGTTTGGGCTTCCTGCCTCGTGGTGAATACCTCCTTCGTGC
CCTGAGAGAGACATTCGACGCCCCAGATACGCCCTTCTGGCACGCCGTGG
CAGAGCAAGTCTACGGCTTCACCTGGTGTCCGTCCGACAACACCAAACTT
TGTCATGGATGCGTGCACGGGAGCTGCAGGGCCGGCATGTTGGCCTGCTT
CCCAGATTATCTCCACTTCCTCGGCGAATTGGCCTGGCAGATTTACATGG
CGCGGTATCAGACCGGGCTGTTGCTGGACAAATTGATGCCTCCGCGCAAG
GACAGCCCCGGTGTCGGGGTGGATCCGTACGGCGATGCGGTGCTCAATGC
CATGAATCCCATGTTGAAGGCCGTGGGACGCAGCGCCCAGCCGGGGAACT
ATTCACTGCGAGACCGGTGCCAGAACCCGCAACGCTACGATGACCTGCTC
CAGCACTGCGTGCTCCACTTCAAGGAGTGTCCGAGATGCCGGGGTTACGA
TGCGATGACCTGGCAGGAGCGGGTGCCGGCCATCGGAGAGGTGTATGAGA
ATAAGTATACGGACTGCAGCTGCATGAACCTCATCAGTGCGTATATGATC
CTCACCTCGCCCGATCGGCTGTGGTGGTTGGCGGACCCGACGGCCGAGTA
TACTGGGCCTCAAGAGGAGTGGTCGGCGCTGCTCTGCTAGATGAGTTTCT
CGGCAGTTTTGGCGAGCACAGTGTGCCTGGCCTCATGTGCCGCTTCTGGC
GAGCCATCTCTGTGCACGATCACCATCTTGCCGCTTACTCTCTTGGTGGG
TCTGGCTGCCATCGGTCGCATCTTCCAGAGCAATTCGGCGGTTGAAGACA
TGGTCCAGGATGCGCCCATGGGCAGAAGACCCGGTCAGCTCTCCGAAGGC
ATGAAGATCGTGACTGATCACCGCAAGACTTGGAAGCCCACCATTGGCTT
GCAGTTGTTCGATGCTCGCAACCCCGTGGGCATCTATGATCCACACATGC
GGGCCGCCATCTTCCACGAATGTCTGGCCTGGACTCATGATCTGAGAGAC
CTTCCTGATCCCGAGCTCCTCGCCACAGCGGCTCCCAGCCGTTTGGGCTT
CCTGCCTCGTGGTGAATACCTCCTTCGTGCCCTGAGAGAGACATTCGACG
CCCCAGATACGCCCTTCTGGCACGCCGTGGCAGAGCAAGTCTACGGCTTC
ACCTGGTGTCCGTCCGACAACACCAAACTTTGTCATGGATGCGTGCACGG
GAGCTGCAGGGCCGGCATGTTGGCCTGCTTCCCAGATTATCTCCACTTCC
TCGGCGAATTGGCCTGGCAGATTTACATGGCGCGGTATCAGACCGGGCTG
TTGCTGGACAAATTGATGCCTCCGCGCAAGGACAGCCCCGGTGTCGGGGT
GGATCCGTACGGCGATGCGGTGCTCAATGCCATGAATCCCATGTTGAAGG
CCGTGGGACGCAGCGCCCAGCCGGGGAACTATTCACTGCGAGACCGGTGC
CAGAACCCGCAACGCTACGATGACCTGCTCCAGCACTGCGTGCTCCACTT
CAAGGAGTGTCCGAGATGCCGGGGTTACGATGCGATGACCTGGCAGGAGC
GGGTGCCGGCCATCGGAGAGGTGTATGAGAATAAGTATACGGACTGCAGC
TGCATGAACCTCATCAGTGCGTATATGATCCTCACCTCGCCCGATCGGCT
GTGGTGGTTGGCGGACCCGACGGCCGAGTATACTGGGCCTCAAGAGGAGT
GGTCGGCGCTGCTCTGCTAGATGAGTTTCTCGGCAGTTTTGGCGAGCACA
GTGTGCCTGGCCTCATGTGCCGCTTCTGGCGAGCCATCTCTGTGCACGAT
CACCATCTTGCCGCTTACTCTCTTGGTGGGTCTGGCTGCCATCGGTCGCA
TCTTCCAGAGCAATTCGGCGGTTGAAGACATGGTCCAGGATGCGCCCATG
GGCAGAAGAC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.9 |
| Note | SECRETED:SignalP(1-18) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:5408615..5411071 - |
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