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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:5447886..5449111+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004497-T1 ID=KJC3_004497-T1|Name=KJC3_004497-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1226bp|location=Sequence derived from alignment at ch3:5447886..5449111+ (Aspergillus niger KJC3)
CCATCCCTTACCAGTCCTTCTTGTAATCCGTGTTTTGTTTTGTGCTTCCT
CTGAGAGCCGTTGTTCTGCCACTCTTTTCAGAGCAACGCGATTCTCGTTC
ACTCGTTCATCTCATTCGTCGCGTCGCCCTAAACAACTTGTTTTAGTTGC
ACATTACGTTAAGGGATTTTGCCCCAGTCGCTCATTTCCATCCACCATGA
ATCGCTCACTTTTCTCCATTTTCATCGCTGTCTGCGTCTATGCGCATTGT
GTGTTTGCCTCTTTAACTTCGAGCGAGATTGCCAACTCCTTGAATGAATT
GGCGCAACAAGGTTTCGCTGCCAAGGATCTCGTATTGGAGATTAACTCCA
CCGCCGATGCCGGTCCAATGCGTGTAGGTGACCCTGGGTATCATGCGATA
CAATAATCATACACAACTTTAAGAATGTGTAACCCTGATAAGATGTAGGA
CGTCTATACAGAAATGGATACAATGGTCACCGTGGTTCTTACAGATGTTG
AGTTCATGACCAATACTCCCATCATCACCGATCAAGCCGAGGAGCAGACC
GTATATGAAGGGTATTCGAATGTGAGGTCATCGGCCTAATTCATAGTACC
AGCGAAATATGTAACTTATCTCATTGGCTGCTAGTTCGTACAATCGCTCC
TCGAGCTCATGGACGCCTTCTCCAGCAGCGCAACCGAGTTGAAGTCGATT
GACTCAACCACCAAGGATAAAGTCCCTTCGGAAGTCCGCATCCTGGAGAG
TGCCGTGGACGTGAGTTGTTCTTCTATTTTGAACGGCTGAGATTCACACT
AATATCATATCAGGCCTATTTCTATAATATTATCGGCCTCTTCCCGGCCA
ACAGCTCGTACAATGCCCAAGCCAGTAACCAGAAAGCCCAGGTGGACACG
CATTGCTTCCAGGCTATCTGGGCATTTGATCTCAGTGATGGCAGTCAGTC
TACCACTCAATCACGCAGGAACACCTCTCTTCATTCTCGACGCATGATGC
GAAACTCTGCTTAGGTTGAGCTATGTATATTTTGTAAGGATTACGCGGAG
GCGAATCGTTGGCCGGATGGTGACTAGCGGAGCCCGCTGCTATGTATTTC
TAACTTTTAATTATCTTGTACCATCTTATTATTGTGACTAGCACTTTCAG
GCTCTACGCTCATAGGCGAAAATTGTTTAGCTGGGTATATACTTTGAATG
TAAGCAGAATCTAGCAATATCACCCC back to topCoding sequence (CDS) from alignment at ch3:5447886..5449111+ >KJC3_004497-T1 ID=KJC3_004497-T1|Name=KJC3_004497-T1|organism=Aspergillus niger KJC3|type=CDS|length=2508bp|location=Sequence derived from alignment at ch3:5447886..5449111+ (Aspergillus niger KJC3)
ATGAATCGCTCACTTTTCTCCATTTTCATCGCTGTCTGCGTCTATGCGCA
TTGTGTGTTTGCCTCTTTAACTTCGAGCGAGATTGCCAACTCCTTGAATG
AATTGGCGCAACAAGGTTTCGCTGCCAAGGATCTCGTATTGGAGATTAAC
TCCACCGCCGATGCCGGTCCAATGCGTGACGTCTATACAGAAATGGATAC
AATGGTCACCGTGGTTCTTACAGATGTTGAGTTCATGACCAATACTCCCA
TCATCACCGATCAAGCCGAGGAGCAGACCGTATATGAAGGGTATTCGAAT
TTCGTACAATCGCTCCTCGAGCTCATGGACGCCTTCTCCAGCAGCGCAAC
CGAGTTGAAGTCGATTGACTCAACCACCAAGGATAAAGTCCCTTCGGAAG
TCCGCATCCTGGAGAGTGCCGTGGACGCCTATTTCTATAATATTATCGGC
CTCTTCCCGGCCAACAGCTCGTACAATGCCCAAGCCAGTAACCAGAAAGC
CCAGGTGGACACGCATTGCTTCCAGGCTATCTGGGCATTTGATCTCAGTG
ATGGCAGTCAGTCTACCACTCAATCACGCAGGAACACCTCTCTTCATTCT
CGACGCATGATGCGAAACTCTGCTTAGATGAATCGCTCACTTTTCTCCAT
TTTCATCGCTGTCTGCGTCTATGCGCATTGTGTGTTTGCCTCTTTAACTT
CGAGCGAGATTGCCAACTCCTTGAATGAATTGGCGCAACAAGGTTTCGCT
GCCAAGGATCTCGTATTGGAGATTAACTCCACCGCCGATGCCGGTCCAAT
GCGTGACGTCTATACAGAAATGGATACAATGGTCACCGTGGTTCTTACAG
ATGTTGAGTTCATGACCAATACTCCCATCATCACCGATCAAGCCGAGGAG
CAGACCGTATATGAAGGGTATTCGAATTTCGTACAATCGCTCCTCGAGCT
CATGGACGCCTTCTCCAGCAGCGCAACCGAGTTGAAGTCGATTGACTCAA
CCACCAAGGATAAAGTCCCTTCGGAAGTCCGCATCCTGGAGAGTGCCGTG
GACGCCTATTTCTATAATATTATCGGCCTCTTCCCGGCCAACAGCTCGTA
CAATGCCCAAGCCAGTAACCAGAAAGCCCAGGTGGACACGCATTGCTTCC
AGGCTATCTGGGCATTTGATCTCAGTGATGGCAGTCAGTCTACCACTCAA
TCACGCAGGAACACCTCTCTTCATTCTCGACGCATGATGCGAAACTCTGC
TTAGATGAATCGCTCACTTTTCTCCATTTTCATCGCTGTCTGCGTCTATG
CGCATTGTGTGTTTGCCTCTTTAACTTCGAGCGAGATTGCCAACTCCTTG
AATGAATTGGCGCAACAAGGTTTCGCTGCCAAGGATCTCGTATTGGAGAT
TAACTCCACCGCCGATGCCGGTCCAATGCGTGACGTCTATACAGAAATGG
ATACAATGGTCACCGTGGTTCTTACAGATGTTGAGTTCATGACCAATACT
CCCATCATCACCGATCAAGCCGAGGAGCAGACCGTATATGAAGGGTATTC
GAATTTCGTACAATCGCTCCTCGAGCTCATGGACGCCTTCTCCAGCAGCG
CAACCGAGTTGAAGTCGATTGACTCAACCACCAAGGATAAAGTCCCTTCG
GAAGTCCGCATCCTGGAGAGTGCCGTGGACGCCTATTTCTATAATATTAT
CGGCCTCTTCCCGGCCAACAGCTCGTACAATGCCCAAGCCAGTAACCAGA
AAGCCCAGGTGGACACGCATTGCTTCCAGGCTATCTGGGCATTTGATCTC
AGTGATGGCAGTCAGTCTACCACTCAATCACGCAGGAACACCTCTCTTCA
TTCTCGACGCATGATGCGAAACTCTGCTTAGATGAATCGCTCACTTTTCT
CCATTTTCATCGCTGTCTGCGTCTATGCGCATTGTGTGTTTGCCTCTTTA
ACTTCGAGCGAGATTGCCAACTCCTTGAATGAATTGGCGCAACAAGGTTT
CGCTGCCAAGGATCTCGTATTGGAGATTAACTCCACCGCCGATGCCGGTC
CAATGCGTGACGTCTATACAGAAATGGATACAATGGTCACCGTGGTTCTT
ACAGATGTTGAGTTCATGACCAATACTCCCATCATCACCGATCAAGCCGA
GGAGCAGACCGTATATGAAGGGTATTCGAATTTCGTACAATCGCTCCTCG
AGCTCATGGACGCCTTCTCCAGCAGCGCAACCGAGTTGAAGTCGATTGAC
TCAACCACCAAGGATAAAGTCCCTTCGGAAGTCCGCATCCTGGAGAGTGC
CGTGGACGCCTATTTCTATAATATTATCGGCCTCTTCCCGGCCAACAGCT
CGTACAATGCCCAAGCCAGTAACCAGAAAGCCCAGGTGGACACGCATTGC
TTCCAGGCTATCTGGGCATTTGATCTCAGTGATGGCAGTCAGTCTACCAC
TCAATCACGCAGGAACACCTCTCTTCATTCTCGACGCATGATGCGAAACT
CTGCTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004497-T1.utr5p1 | KJC3_004497-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004497-T1.utr3p1 | KJC3_004497-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-21) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:5447886..5449111 + |
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