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KJC3_004498-T1, KJC3_004498-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004498-T1
Unique NameKJC3_004498-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:5449437..5450767+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004498-T1 ID=KJC3_004498-T1|Name=KJC3_004498-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1331bp|location=Sequence derived from alignment at ch3:5449437..5450767+ (Aspergillus niger KJC3)
CTCGTCGACAACCTCTTTCACAGTTCTCATACACTCCATTCTCGTGTTTA
AATAATGGCACCATTTACCCTTCTAAAATACAAGGGCTCGACGGTGGACG
TGTCAATAATTCACGCAGGGCAAACATCCGTACCAACAGCCTATGGTTTC
AAAACCCCCATTCTAGGCCATGACACTCTCAATATGCCGTGCTACAGCTT
CTTGATCGAAAACAGGAATAACAATGAAAAGGTTCTTTTTGACCTCGGAC
TAAGAAAAGATTGGAAAGAAAAGCTGCCACCTGCCAGTAAGCCTGAATTG
CTATTTCTAGCCCCATTTCGGGCGACGTAACCCTATGTCGCACATGATAG
CCCATCATGTAAGCTGACTGAGGCTGGCATTGTAAGTCCTCAACCAGATC
GAATCGTCCAAGGCGGTCCTGGAAATTGAACATGATGTTGCCGATCAGCT
TCGCGCAGATGGTATCCCGTTGGAATCTATCAGCGCCATTATCTGGTCCC
ATCATCATATAGACCACACCGGTGATCCATCTCGTTTTCCTCCGTCCACG
AAGCTTGTTGTGGGACCTGGTTTCAAGTCCCACTCTAGAACGTTCCCCGG
CTATCCTTCGAATACCGACTCTCTGGTCACTGATGATGCCTTTATTGGAC
GGGACTTGGTGGAGCTCGACTTTACTGATTCCATTGAGATTGGAGGCTTC
CTCGCCATCGACTTCTTTGAAGACGGCAGCCTGTATCTGCTGAGGTCGAA
CGGACATAGTAAGTAACTGGTCATGTACAGCATGACCTAGATACCGACTG
ACCATCGTTCTCTTGTGTGATAGCTTGCTTACACTCTTTTAAATAGCCGA
CGACCACATCAGTGCCCTGGCGCGTACCTCCGAAAATCGCTTCGTCTTTC
TGGGTGGGGACATCGCTCATCATCCGGGAGAGTTCCGCCCAACCAAGCAC
CTCCCACTTCCGAGTGAGATTAGTCTATGGACAGTGGGCCAACAGTCTGC
TGAAGCGGTATCCGTGTGTCCGGCCTCTGTCTTTGAAGCTATATCCCCTG
CGAAAGGTAGGGGCCTAGATGCAAAAGTCACCCCTTTCTACGAGCTAAAT
GCCGCGATGAACGAAAGCCTGGGAGATGCAGAGGCTGCCCTTGAGAAAAT
GATGACATTCGATGCAACAAGCGAAGTTTTAGTTATTATTGCGCATGATG
CAAGCCTTGGGGATATCCTGCCGTTCTTCCCCAAACGCATGACTGACTGG
CACATGGAAGGGTACAAAGCCAGAGGGGCTTGGAGATTTCTGAGGGATAT
TGCGGTTGTTTTCAATGGAAGCACAGAATAG
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Coding sequence (CDS) from alignment at ch3:5449437..5450767+

>KJC3_004498-T1 ID=KJC3_004498-T1|Name=KJC3_004498-T1|organism=Aspergillus niger KJC3|type=CDS|length=3267bp|location=Sequence derived from alignment at ch3:5449437..5450767+ (Aspergillus niger KJC3)
ATGGCACCATTTACCCTTCTAAAATACAAGGGCTCGACGGTGGACGTGTC
AATAATTCACGCAGGGCAAACATCCGTACCAACAGCCTATGGTTTCAAAA
CCCCCATTCTAGGCCATGACACTCTCAATATGCCGTGCTACAGCTTCTTG
ATCGAAAACAGGAATAACAATGAAAAGGTTCTTTTTGACCTCGGACTAAG
AAAAGATTGGAAAGAAAAGCTGCCACCTGCCATCCTCAACCAGATCGAAT
CGTCCAAGGCGGTCCTGGAAATTGAACATGATGTTGCCGATCAGCTTCGC
GCAGATGGTATCCCGTTGGAATCTATCAGCGCCATTATCTGGTCCCATCA
TCATATAGACCACACCGGTGATCCATCTCGTTTTCCTCCGTCCACGAAGC
TTGTTGTGGGACCTGGTTTCAAGTCCCACTCTAGAACGTTCCCCGGCTAT
CCTTCGAATACCGACTCTCTGGTCACTGATGATGCCTTTATTGGACGGGA
CTTGGTGGAGCTCGACTTTACTGATTCCATTGAGATTGGAGGCTTCCTCG
CCATCGACTTCTTTGAAGACGGCAGCCTGTATCTGCTGAGGTCGAACGGA
CATACCGACGACCACATCAGTGCCCTGGCGCGTACCTCCGAAAATCGCTT
CGTCTTTCTGGGTGGGGACATCGCTCATCATCCGGGAGAGTTCCGCCCAA
CCAAGCACCTCCCACTTCCGAGTGAGATTAGTCTATGGACAGTGGGCCAA
CAGTCTGCTGAAGCGGTATCCGTGTGTCCGGCCTCTGTCTTTGAAGCTAT
ATCCCCTGCGAAAGGTAGGGGCCTAGATGCAAAAGTCACCCCTTTCTACG
AGCTAAATGCCGCGATGAACGAAAGCCTGGGAGATGCAGAGGCTGCCCTT
GAGAAAATGATGACATTCGATGCAACAAGCGAAGTTTTAGTTATTATTGC
GCATGATGCAAGCCTTGGGGATATCCTGCCGTTCTTCCCCAAACGCATGA
CTGACTGGCACATGGAAGGGTACAAAGCCAGAGGGGCTTGGAGATTTCTG
AGGGATATTGCGGTTGTTTTCAATGGAAGCACAGAATAGATGGCACCATT
TACCCTTCTAAAATACAAGGGCTCGACGGTGGACGTGTCAATAATTCACG
CAGGGCAAACATCCGTACCAACAGCCTATGGTTTCAAAACCCCCATTCTA
GGCCATGACACTCTCAATATGCCGTGCTACAGCTTCTTGATCGAAAACAG
GAATAACAATGAAAAGGTTCTTTTTGACCTCGGACTAAGAAAAGATTGGA
AAGAAAAGCTGCCACCTGCCATCCTCAACCAGATCGAATCGTCCAAGGCG
GTCCTGGAAATTGAACATGATGTTGCCGATCAGCTTCGCGCAGATGGTAT
CCCGTTGGAATCTATCAGCGCCATTATCTGGTCCCATCATCATATAGACC
ACACCGGTGATCCATCTCGTTTTCCTCCGTCCACGAAGCTTGTTGTGGGA
CCTGGTTTCAAGTCCCACTCTAGAACGTTCCCCGGCTATCCTTCGAATAC
CGACTCTCTGGTCACTGATGATGCCTTTATTGGACGGGACTTGGTGGAGC
TCGACTTTACTGATTCCATTGAGATTGGAGGCTTCCTCGCCATCGACTTC
TTTGAAGACGGCAGCCTGTATCTGCTGAGGTCGAACGGACATACCGACGA
CCACATCAGTGCCCTGGCGCGTACCTCCGAAAATCGCTTCGTCTTTCTGG
GTGGGGACATCGCTCATCATCCGGGAGAGTTCCGCCCAACCAAGCACCTC
CCACTTCCGAGTGAGATTAGTCTATGGACAGTGGGCCAACAGTCTGCTGA
AGCGGTATCCGTGTGTCCGGCCTCTGTCTTTGAAGCTATATCCCCTGCGA
AAGGTAGGGGCCTAGATGCAAAAGTCACCCCTTTCTACGAGCTAAATGCC
GCGATGAACGAAAGCCTGGGAGATGCAGAGGCTGCCCTTGAGAAAATGAT
GACATTCGATGCAACAAGCGAAGTTTTAGTTATTATTGCGCATGATGCAA
GCCTTGGGGATATCCTGCCGTTCTTCCCCAAACGCATGACTGACTGGCAC
ATGGAAGGGTACAAAGCCAGAGGGGCTTGGAGATTTCTGAGGGATATTGC
GGTTGTTTTCAATGGAAGCACAGAATAGATGGCACCATTTACCCTTCTAA
AATACAAGGGCTCGACGGTGGACGTGTCAATAATTCACGCAGGGCAAACA
TCCGTACCAACAGCCTATGGTTTCAAAACCCCCATTCTAGGCCATGACAC
TCTCAATATGCCGTGCTACAGCTTCTTGATCGAAAACAGGAATAACAATG
AAAAGGTTCTTTTTGACCTCGGACTAAGAAAAGATTGGAAAGAAAAGCTG
CCACCTGCCATCCTCAACCAGATCGAATCGTCCAAGGCGGTCCTGGAAAT
TGAACATGATGTTGCCGATCAGCTTCGCGCAGATGGTATCCCGTTGGAAT
CTATCAGCGCCATTATCTGGTCCCATCATCATATAGACCACACCGGTGAT
CCATCTCGTTTTCCTCCGTCCACGAAGCTTGTTGTGGGACCTGGTTTCAA
GTCCCACTCTAGAACGTTCCCCGGCTATCCTTCGAATACCGACTCTCTGG
TCACTGATGATGCCTTTATTGGACGGGACTTGGTGGAGCTCGACTTTACT
GATTCCATTGAGATTGGAGGCTTCCTCGCCATCGACTTCTTTGAAGACGG
CAGCCTGTATCTGCTGAGGTCGAACGGACATACCGACGACCACATCAGTG
CCCTGGCGCGTACCTCCGAAAATCGCTTCGTCTTTCTGGGTGGGGACATC
GCTCATCATCCGGGAGAGTTCCGCCCAACCAAGCACCTCCCACTTCCGAG
TGAGATTAGTCTATGGACAGTGGGCCAACAGTCTGCTGAAGCGGTATCCG
TGTGTCCGGCCTCTGTCTTTGAAGCTATATCCCCTGCGAAAGGTAGGGGC
CTAGATGCAAAAGTCACCCCTTTCTACGAGCTAAATGCCGCGATGAACGA
AAGCCTGGGAGATGCAGAGGCTGCCCTTGAGAAAATGATGACATTCGATG
CAACAAGCGAAGTTTTAGTTATTATTGCGCATGATGCAAGCCTTGGGGAT
ATCCTGCCGTTCTTCCCCAAACGCATGACTGACTGGCACATGGAAGGGTA
CAAAGCCAGAGGGGCTTGGAGATTTCTGAGGGATATTGCGGTTGTTTTCA
ATGGAAGCACAGAATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004498KJC3_004498Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004498-T1.utr5p1KJC3_004498-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004498-T1.exon1KJC3_004498-T1.exon1Aspergillus niger KJC3exon
KJC3_004498-T1.exon2KJC3_004498-T1.exon2Aspergillus niger KJC3exon
KJC3_004498-T1.exon3KJC3_004498-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004498-T1.cdsKJC3_004498-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004498-T1KJC3_004498-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036866
DBxrefInterPro:IPR001279
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:5449437..5450767 +
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