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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:5451012..5451898+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004499-T1 ID=KJC3_004499-T1|Name=KJC3_004499-T1|organism=Aspergillus niger KJC3|type=mRNA|length=887bp|location=Sequence derived from alignment at ch3:5451012..5451898+ (Aspergillus niger KJC3)
CATAAAAGGCCCACCACATGTATGTTGCTTGCATCCGAAATCTGAATTCA
TAGTCAACCTCTCATCCATCGCAACATCTTCGGATTGATCTTTCAAGGCC
CGCTGCATTCATGTCCGCTCCAACAACCGTTATTTTCGTCCCCGGTGCGT
GGCACAGCCCACACTGCTTCGACGAAGTCGTTCGACTGCTTCAAGCCGAG
GGTTATAATACTGATCTTGTTCACTTGCCCTCGGTTGACCCAATACAACC
TCATTCCGACTTCTCGGTAGATGTGTCTCACATCAGAAATCAGATCCAGG
TTGCAATTGATGCTGGGCAAAGAGTGGTAGTTACGGTGCACTCGTACGGC
GGACTTCCGGGCTCTGAAGCGATTCGTGGGTTAGACTGGAGTACGCGTCA
ACGCCAGGGCCAACCAGGGGGCGTAATTCATCTCTTTTTCTGCTGCTCCT
TCATCGTTCCAGCAGGAAAGTCTCTGATTAGTTCATTCGGCGGCCAGGAC
CTTCCGTGGTTCCGCATCTCAGATGATCGTCTCCTGGTGACACCGGCCAC
TCCCAGGACAACCTTCTACAACGACATGAGTCCGCGGGAGACAGAAAGTG
CTGTCCAAACATTGAGGCCACACAGTTATCAGACATTCCACAGCAAATTA
TCCTACGAGGCGTGGAGACATGTGCCGTCCACGTACCTCTACTGCCTCAA
GGACGAGGCGATCCCACTCCCAGTGCAGAGAATGATGGTGGAGGAGATAG
CAAAAGGGGTCAACATTCATACCCATGTTGTGAATGCATCGCACAGTCCT
TTCTATACGGCACCGGCGGAGGTGGCAGATGCCATTGGAAAGGCCGCCAG
CCGATCTGCGGAACTAATTACGGACGGGAAATTGTAA back to topCoding sequence (CDS) from alignment at ch3:5451012..5451898+ >KJC3_004499-T1 ID=KJC3_004499-T1|Name=KJC3_004499-T1|organism=Aspergillus niger KJC3|type=CDS|length=777bp|location=Sequence derived from alignment at ch3:5451012..5451898+ (Aspergillus niger KJC3)
ATGTCCGCTCCAACAACCGTTATTTTCGTCCCCGGTGCGTGGCACAGCCC
ACACTGCTTCGACGAAGTCGTTCGACTGCTTCAAGCCGAGGGTTATAATA
CTGATCTTGTTCACTTGCCCTCGGTTGACCCAATACAACCTCATTCCGAC
TTCTCGGTAGATGTGTCTCACATCAGAAATCAGATCCAGGTTGCAATTGA
TGCTGGGCAAAGAGTGGTAGTTACGGTGCACTCGTACGGCGGACTTCCGG
GCTCTGAAGCGATTCGTGGGTTAGACTGGAGTACGCGTCAACGCCAGGGC
CAACCAGGGGGCGTAATTCATCTCTTTTTCTGCTGCTCCTTCATCGTTCC
AGCAGGAAAGTCTCTGATTAGTTCATTCGGCGGCCAGGACCTTCCGTGGT
TCCGCATCTCAGATGATCGTCTCCTGGTGACACCGGCCACTCCCAGGACA
ACCTTCTACAACGACATGAGTCCGCGGGAGACAGAAAGTGCTGTCCAAAC
ATTGAGGCCACACAGTTATCAGACATTCCACAGCAAATTATCCTACGAGG
CGTGGAGACATGTGCCGTCCACGTACCTCTACTGCCTCAAGGACGAGGCG
ATCCCACTCCCAGTGCAGAGAATGATGGTGGAGGAGATAGCAAAAGGGGT
CAACATTCATACCCATGTTGTGAATGCATCGCACAGTCCTTTCTATACGG
CACCGGCGGAGGTGGCAGATGCCATTGGAAAGGCCGCCAGCCGATCTGCG
GAACTAATTACGGACGGGAAATTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004499-T1.utr5p1 | KJC3_004499-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR000073 |
| DBxref | PFAM:PF12697 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:5451012..5451898 + |
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