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KJC3_004505-T1, KJC3_004505-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004505-T1
Unique NameKJC3_004505-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:5464203..5466038+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004505-T1 ID=KJC3_004505-T1|Name=KJC3_004505-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1836bp|location=Sequence derived from alignment at ch3:5464203..5466038+ (Aspergillus niger KJC3)
CCGCTGGCAACCGATTCCTCTCTCAGTTTATATGCTTCTTATACATACAT
CTACTAATGTGACGTAGACATCCATCTATTCAGCTGGGAAGATTCTGAAC
ACTGGAGCCCCTGAAAGGGTCGTCGGGTGTGCCCTAGTGGCTTGGCTTGG
CTTCATTTTCCCTCTTCGCACGGCCCCCAAAACCCACTGACCCCTCGGGT
GTGTCAGAAGCAGCATCAGAGAGTGCAAGGGATTGGCCCATTCGGCAGAC
TGACATTCCTGGCTCCCCCGCCCACAGCCAACCGGCTGCCTCACCGATGT
CACCCTCGTCCCTCCGGCCTCTTCAGATTGAACTCGCGAGGTTCTCCCTC
ATGCCTACCTGGGATGGCGTGCTCGCGCGTGTCCTTGATAGTCTGCCAAT
CGTCCGGGCTTGAGAATTATCTGGCTCTTCAAAGGGATCTTGGCCCCCAC
CAGCCTCGGCACGGCCCCCATTCAATCAGCTTTAGTGTGAGCCTGGCGCG
CTGACCAGCGACGGTCATTTCCCCAGATGAAAAACTCCCTTCGTCTCGCC
TATTCTCCTTTCACTCTGTTGCTGAAATGTGAGATGGCACAGCTATTGCT
GCTGCTGCCGGCCTGAAATCAAATCCCACCTTGCTTTGAGAGAGAAAAGT
TTGGGGGGTGTTCGTCAGCATGTGGCTCAACTATCTGCTGCTGATCGCCC
TTCTGGAACGGCTGGTGGCCGGCACCACCTGCTACTTCCCTGAGGGCAAC
GTGGCCGAGGATTACACGCCTTGCTCGGACAATGGTGTCTCGTTCTGCTG
CAACAAGGACTCAATTTGCCTCAGCAATGGCCTCTGCACCTCCATGCATC
AACCGTATGTTCTCGGCCGCGGCGCCTGTACCTCCCAAAGTTGGAACGAT
ACCTCGGTCTGCGACGATGTCTGTCACGGAAGTACGTGGGATACCTCGCT
CCCCTTAGTTATAGTTTGGCTTCAACTTCTTCTACTGTTCTTCTTCAATG
CGACTGACCAAATGTCGCAAAATAACAGTCACCACCGCGTGGAGCAGCGC
CTGCTCCCTAATCCTCTACGGCACCGTGAACGGAGTCAAGTTGTACTGCC
CCAACTCAATTATTTCCAACGGAACCGACTCCCTCGGATGCGCCAATGGT
GTCTCACCCATTTCAGTGGGCACTGGCAAGCCCATTGCCGGCAAAGCCTA
TCTGGCCAGCTACTCCCTCCTCCCTACTGCTAGCACCGCCACCAGCACGG
CGACCGCCACTTCCACCACCGAACTCGATACTTCCTCCCCCTCCACCTCC
ACCACAGCCGATGAAAGCTGCAGCAGCTCGACCGCGGCTAATAGCAACCA
AGTCAGCCGGGCGACCGTGACTGCCGTTGGGGCCGGGGTCGGCGTCCCGC
TTGGGCTGCTGGCGTTGGCATCGCTGGGCTATGGCTTTAATGAGAGAAGA
AAGCGACTGCAACTCCAGAATGCTTCACCAAACATGTACCAGATGCCGGC
GGCGTCATCAACCTCCTACCGATCGAGAAATGTGGGCGCGAAGGAGCTGT
CGGGTCATATACCGCTCCATGAGCTGGACACGTGATTACGCATGAGCCCG
TGCATATATTTGTTCGACAAGCGTTTGGTGAAAAGGGATGACAGAAAGGG
AGAGTGGCATACAGAATCTTGGTGACGTTTTGAGGTCACAGCAACTATAT
GGATGATGTTGCATGTATCTCCGTTACCCCAACAATTGATGTCGGACCGC
TGGCTTAGACCCGCTGAACCTGTACTTTTGGGGACTCAGCAAGAACGAAC
CGTAAAGATAATAATACTAATACACTTCCTCCAAGC
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Coding sequence (CDS) from alignment at ch3:5464203..5466038+

>KJC3_004505-T1 ID=KJC3_004505-T1|Name=KJC3_004505-T1|organism=Aspergillus niger KJC3|type=CDS|length=1638bp|location=Sequence derived from alignment at ch3:5464203..5466038+ (Aspergillus niger KJC3)
ATGTGGCTCAACTATCTGCTGCTGATCGCCCTTCTGGAACGGCTGGTGGC
CGGCACCACCTGCTACTTCCCTGAGGGCAACGTGGCCGAGGATTACACGC
CTTGCTCGGACAATGGTGTCTCGTTCTGCTGCAACAAGGACTCAATTTGC
CTCAGCAATGGCCTCTGCACCTCCATGCATCAACCGTATGTTCTCGGCCG
CGGCGCCTGTACCTCCCAAAGTTGGAACGATACCTCGGTCTGCGACGATG
TCTGTCACGGAATCACCACCGCGTGGAGCAGCGCCTGCTCCCTAATCCTC
TACGGCACCGTGAACGGAGTCAAGTTGTACTGCCCCAACTCAATTATTTC
CAACGGAACCGACTCCCTCGGATGCGCCAATGGTGTCTCACCCATTTCAG
TGGGCACTGGCAAGCCCATTGCCGGCAAAGCCTATCTGGCCAGCTACTCC
CTCCTCCCTACTGCTAGCACCGCCACCAGCACGGCGACCGCCACTTCCAC
CACCGAACTCGATACTTCCTCCCCCTCCACCTCCACCACAGCCGATGAAA
GCTGCAGCAGCTCGACCGCGGCTAATAGCAACCAAGTCAGCCGGGCGACC
GTGACTGCCGTTGGGGCCGGGGTCGGCGTCCCGCTTGGGCTGCTGGCGTT
GGCATCGCTGGGCTATGGCTTTAATGAGAGAAGAAAGCGACTGCAACTCC
AGAATGCTTCACCAAACATGTACCAGATGCCGGCGGCGTCATCAACCTCC
TACCGATCGAGAAATGTGGGCGCGAAGGAGCTGTCGGGTCATATACCGCT
CCATGAGCTGGACACGTGAATGTGGCTCAACTATCTGCTGCTGATCGCCC
TTCTGGAACGGCTGGTGGCCGGCACCACCTGCTACTTCCCTGAGGGCAAC
GTGGCCGAGGATTACACGCCTTGCTCGGACAATGGTGTCTCGTTCTGCTG
CAACAAGGACTCAATTTGCCTCAGCAATGGCCTCTGCACCTCCATGCATC
AACCGTATGTTCTCGGCCGCGGCGCCTGTACCTCCCAAAGTTGGAACGAT
ACCTCGGTCTGCGACGATGTCTGTCACGGAATCACCACCGCGTGGAGCAG
CGCCTGCTCCCTAATCCTCTACGGCACCGTGAACGGAGTCAAGTTGTACT
GCCCCAACTCAATTATTTCCAACGGAACCGACTCCCTCGGATGCGCCAAT
GGTGTCTCACCCATTTCAGTGGGCACTGGCAAGCCCATTGCCGGCAAAGC
CTATCTGGCCAGCTACTCCCTCCTCCCTACTGCTAGCACCGCCACCAGCA
CGGCGACCGCCACTTCCACCACCGAACTCGATACTTCCTCCCCCTCCACC
TCCACCACAGCCGATGAAAGCTGCAGCAGCTCGACCGCGGCTAATAGCAA
CCAAGTCAGCCGGGCGACCGTGACTGCCGTTGGGGCCGGGGTCGGCGTCC
CGCTTGGGCTGCTGGCGTTGGCATCGCTGGGCTATGGCTTTAATGAGAGA
AGAAAGCGACTGCAACTCCAGAATGCTTCACCAAACATGTACCAGATGCC
GGCGGCGTCATCAACCTCCTACCGATCGAGAAATGTGGGCGCGAAGGAGC
TGTCGGGTCATATACCGCTCCATGAGCTGGACACGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004505KJC3_004505Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004505-T1.utr5p1KJC3_004505-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004505-T1.exon1KJC3_004505-T1.exon1Aspergillus niger KJC3exon
KJC3_004505-T1.exon2KJC3_004505-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004505-T1.cdsKJC3_004505-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004505-T1.utr3p1KJC3_004505-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004505-T1KJC3_004505-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:5464203..5466038 +
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