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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:5488650..5489833+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004513-T1 ID=KJC3_004513-T1|Name=KJC3_004513-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1184bp|location=Sequence derived from alignment at ch3:5488650..5489833+ (Aspergillus niger KJC3)
ATGGCTTCTCAAAACTGGCGCCCTGGTAAACGAGTTGCAATCGTCGGAGG
AGGTCCGGGATCAATTTCGGCCGGCCTTGCCTTCATTCAGCGTGGCTATG
ATGTGCGCATATTTGAGCGACAACCAGAATGTAAAGCTATAGGCGGCGCT
GTTCTTCTGTCTACTCCCGTCCTGGCTATCCTCCGATCCTACGGCTTGAG
CCTCGACAACGTTGGCTCATACACAGTCACCTACTTCAAAAACAAGTCCG
GAACAGTGCGCGTCAAACTACCGTTCAATCCTGCCGTCGAGCAGCGGATG
GGTATCAAAGGCTGGCATTACGGGGTGCTTCGTTCCTCTATCTTCAAAAA
GATGCTTGACCTTGTCCCCGATGGTGTAATCTACGCGGGCCATGAGTTTA
TATATTATACCAACTTAAGGCCGATATCCTCGTCGGTGCAGATGGTATTC
GATCAAAGGTTTCACAGCAGGCTTTTGGCGACCCTCACCTATTTCACACC
GGAATTCGTCTTTGGCTCGCCTGGTGCGATTACATTCCCGACATTCCTCC
CAATTATGGTGTTGTCTCCCATGACTGCCAGCACCAAGCCAGCTTTTTTC
CAATGCTGCATGATGGGAAGCCCGGGTTTGAGTGGTGGGTAGTCGAGCCG
TCTTGGGAGGGGAAGCCTATCCCGGAAGACCCAAAGGCACACCTCACGGA
AATTTTAAAAGATTGGGCACAGCCAATGCCTCGTTTTCTAGAGGCCACCA
ACTTTGACAGGCAGATTTATCGCTGGGAAATCTATAATCGACCTTCTATG
AAAAAGTGGTCTACAGGACGGGTGGTGTGTGTTGGGGACGCTATACACCC
AGTGTCACCTTATGCCGCGTATGGTATGGGAATGGCGATTGAAGACGGGT
ACTTTCTCGCCAGAGCGCTGGATGGGGTAGACTTACGCGACCTGCGGAGG
GTCAAAGCTGGGTGTGAGATTTACGAAGAACAACGAGTTGACTATGTCAA
TCACAACATGGAATTTGCTCGTTTCCTTGGCAAGATGTTTCACGCGGTGC
CGCGACCTCTCGCTCAAATTCGTGATTTGATCTTCGACCACACCCCAATT
CTGAGGAGATTCCTTGGGGATGGTTACCTGAAGAAGGCCGAGCAGGAGAC
ACTTAACCTGAAGGAGCTTCAAGTCGCTCCCTGA back to topCoding sequence (CDS) from alignment at ch3:5488650..5489833+ >KJC3_004513-T1 ID=KJC3_004513-T1|Name=KJC3_004513-T1|organism=Aspergillus niger KJC3|type=CDS|length=1992bp|location=Sequence derived from alignment at ch3:5488650..5489833+ (Aspergillus niger KJC3)
ATGGCTTCTCAAAACTGGCGCCCTGGTAAACGAGTTGCAATCGTCGGAGG
AGGTCCGGGATCAATTTCGGCCGGCCTTGCCTTCATTCAGCGTGGCTATG
ATGTGCGCATATTTGAGCGACAACCAGAATGTAAAGCTATAGGCGGCGCT
GTTCTTCTGTCTACTCCCGTCCTGGCTATCCTCCGATCCTACGGCTTGAG
CCTCGACAACGTTGGCTCATACACAGTCACCTACTTCAAAAACAAGTCCG
GAACAGTGCGCGTCAAACTACCGTTCAATCCTGCCGTCGAGCAGCGGATG
GGTATCAAAGGCTGGCATTACGGGGTGCTTCGTTCCTCTATCTTCAAAAA
GATGCTTGACCTTGTCCCCGATGGTGTAATCTACGCGGGCCATGAGTTTA
TATATTATACCAACTTAAGGCCGATATCCTCGTCGGTGCAGATGGTATTC
GATCAAAGGTTTCACAGCAGGCTTTTGGCGACCCTCACCTATTTCACACC
GGAATTCGTCTTTGGCTCGCCTGATTGGGCACAGCCAATGCCTCGTTTTC
TAGAGGCCACCAACTTTGACAGGCAGATTTATCGCTGGGAAATCTATAAT
CGACCTTCTATGAAAAAGTGGTCTACAGGACGGGTGGTGTGTGTTGGGGA
CGCTATACACCCAGTGTCACCTTATGCCGCGTATGGTATGGGAATGGCGA
TTGAAGACGGGTACTTTCTCGCCAGAGCGCTGGATGGGGTAGACTTACGC
GACCTGCGGAGGGTCAAAGCTGGGTGTGAGATTTACGAAGAACAACGAGT
TGACTATGTCAATCACAACATGGAATTTGCTCGTTTCCTTGGCAAGATGT
TTCACGCGGTGCCGCGACCTCTCGCTCAAATTCGTGATTTGATCTTCGAC
CACACCCCAATTCTGAGGAGATTCCTTGGGGATGGTTACCTGAAGAAGGC
CGAGCAGGAGACACTTAACCTGAAGGAGCTTCAAGTCGCTCCCTGAATGG
CTTCTCAAAACTGGCGCCCTGGTAAACGAGTTGCAATCGTCGGAGGAGGT
CCGGGATCAATTTCGGCCGGCCTTGCCTTCATTCAGCGTGGCTATGATGT
GCGCATATTTGAGCGACAACCAGAATGTAAAGCTATAGGCGGCGCTGTTC
TTCTGTCTACTCCCGTCCTGGCTATCCTCCGATCCTACGGCTTGAGCCTC
GACAACGTTGGCTCATACACAGTCACCTACTTCAAAAACAAGTCCGGAAC
AGTGCGCGTCAAACTACCGTTCAATCCTGCCGTCGAGCAGCGGATGGGTA
TCAAAGGCTGGCATTACGGGGTGCTTCGTTCCTCTATCTTCAAAAAGATG
CTTGACCTTGTCCCCGATGGTGTAATCTACGCGGGCCATGAGTTTATATA
TTATACCAACTTAAGGCCGATATCCTCGTCGGTGCAGATGGTATTCGATC
AAAGGTTTCACAGCAGGCTTTTGGCGACCCTCACCTATTTCACACCGGAA
TTCGTCTTTGGCTCGCCTGATTGGGCACAGCCAATGCCTCGTTTTCTAGA
GGCCACCAACTTTGACAGGCAGATTTATCGCTGGGAAATCTATAATCGAC
CTTCTATGAAAAAGTGGTCTACAGGACGGGTGGTGTGTGTTGGGGACGCT
ATACACCCAGTGTCACCTTATGCCGCGTATGGTATGGGAATGGCGATTGA
AGACGGGTACTTTCTCGCCAGAGCGCTGGATGGGGTAGACTTACGCGACC
TGCGGAGGGTCAAAGCTGGGTGTGAGATTTACGAAGAACAACGAGTTGAC
TATGTCAATCACAACATGGAATTTGCTCGTTTCCTTGGCAAGATGTTTCA
CGCGGTGCCGCGACCTCTCGCTCAAATTCGTGATTTGATCTTCGACCACA
CCCCAATTCTGAGGAGATTCCTTGGGGATGGTTACCTGAAGAAGGCCGAG
CAGGAGACACTTAACCTGAAGGAGCTTCAAGTCGCTCCCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002938 |
| DBxref | InterPro:IPR036188 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:5488650..5489833 + |
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