|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:5491209..5492418+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004515-T1 ID=KJC3_004515-T1|Name=KJC3_004515-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1210bp|location=Sequence derived from alignment at ch3:5491209..5492418+ (Aspergillus niger KJC3)
ATGGGTCCGGAGACATATGCCTATGATAATCGGAGTTTGCAACAGGCCAT
AATGAAGGAGATGGAGCGAAATGGTTGGGTTGGCGTTTGCTGTGAACCCA
ATCTGGTCTTTGTTGCGTGCAACCAGTTTCCGGTGAGTAGCCTGAACTAT
GAATGTCTGGAACTGCTACTAACTCTGATAGATCATTGCTATGCGCCTCA
ATGATGCACGTGATGGTATTAAGGTGGTAGATGAAGTTCTTAAGAAATAC
AGAGCCGCCTTGGAGAAGAAGGATATGATTTCTCAGGATGGTCTATTTAA
GGATTGGATTAGCGTAAAACAGGGGCATACGGCAACGGCTCAAAGTGTGG
GCCTCACGGCTTGGTAGGTGTGACTCAGAATATTGCATTTTCTAGGCTAA
CATTGATACAGGGCTGCTGCGTTTATGAATACGTGGAATTCTGAATTTGT
CCGCGCTGGCTTCAAAAATCATGTTGTTGGGTTCATCACTAACATCGATG
GACAAGTTGAGCTTCAACATCCCATGGTCGCAGGTGCTTACAGGGCAGCT
CTGGCTCAAGGAGACGCAGCAAAAGGCCCGTCCCAAGTTCTACAGGGCGC
GCGTGAGTTCTATAAAGCCAACAAGTCGAACATCAACTTTCCATACAACG
AGCCAACTTTCGGGTATGTTGTTAAATGGCTCTCGGAGTTGGGAAAGGCA
ACAGAGCTAAATGGAATTCTTGCATACGCTGATAAGCACCTCCAACCAAC
CTGGGAAAATGGTGGTCTTTACTATCCTCGGAATGACCAAGCAACTGATA
ATGAAGGTCGCTGGACTCACATGGACCCCTTCTCGGGTAACACTGCTATT
GGCTACTCGCGGTTGAATGTGGAGAATGGACAGAAGAAAATCTTTGAGGA
GCCTTGGACAAAGGATACACTGGCTAGTCGTCCATACGTGGATGGGCTGG
ATCTCTCACAGGGCGTTGATTGCTTGCGAGGATTGTGGGATCAGGATCGC
AGCGCCCTCATTGTCACCGTCCGCGAATGGCCTGGACAAGGGGCTAACAT
CAAGTTTCGAGTTGAGAATCTCTCATCTGGTACCTGGACCGTTTATACTT
CCCAGGGGCGCTTCGCTGAGCATAAGGTCCTCAGCGGGGGACATATCGCC
ATAGATGCGATTATTAAAGCAAAGGAGGAGGTTGATTTTGTGGTTGTCAA
AGGTGTTTAG back to topCoding sequence (CDS) from alignment at ch3:5491209..5492418+ >KJC3_004515-T1 ID=KJC3_004515-T1|Name=KJC3_004515-T1|organism=Aspergillus niger KJC3|type=CDS|length=3339bp|location=Sequence derived from alignment at ch3:5491209..5492418+ (Aspergillus niger KJC3)
ATGGGTCCGGAGACATATGCCTATGATAATCGGAGTTTGCAACAGGCCAT
AATGAAGGAGATGGAGCGAAATGGTTGGGTTGGCGTTTGCTGTGAACCCA
ATCTGGTCTTTGTTGCGTGCAACCAGTTTCCGATCATTGCTATGCGCCTC
AATGATGCACGTGATGGTATTAAGGTGGTAGATGAAGTTCTTAAGAAATA
CAGAGCCGCCTTGGAGAAGAAGGATATGATTTCTCAGGATGGTCTATTTA
AGGATTGGATTAGCGTAAAACAGGGGCATACGGCAACGGCTCAAAGTGTG
GGCCTCACGGCTTGGGCTGCTGCGTTTATGAATACGTGGAATTCTGAATT
TGTCCGCGCTGGCTTCAAAAATCATGTTGTTGGGTTCATCACTAACATCG
ATGGACAAGTTGAGCTTCAACATCCCATGGTCGCAGGTGCTTACAGGGCA
GCTCTGGCTCAAGGAGACGCAGCAAAAGGCCCGTCCCAAGTTCTACAGGG
CGCGCGTGAGTTCTATAAAGCCAACAAGTCGAACATCAACTTTCCATACA
ACGAGCCAACTTTCGGGTATGTTGTTAAATGGCTCTCGGAGTTGGGAAAG
GCAACAGAGCTAAATGGAATTCTTGCATACGCTGATAAGCACCTCCAACC
AACCTGGGAAAATGGTGGTCTTTACTATCCTCGGAATGACCAAGCAACTG
ATAATGAAGGTCGCTGGACTCACATGGACCCCTTCTCGGGTAACACTGCT
ATTGGCTACTCGCGGTTGAATGTGGAGAATGGACAGAAGAAAATCTTTGA
GGAGCCTTGGACAAAGGATACACTGGCTAGTCGTCCATACGTGGATGGGC
TGGATCTCTCACAGGGCGTTGATTGCTTGCGAGGATTGTGGGATCAGGAT
CGCAGCGCCCTCATTGTCACCGTCCGCGAATGGCCTGGACAAGGGGCTAA
CATCAAGTTTCGAGTTGAGAATCTCTCATCTGGTACCTGGACCGTTTATA
CTTCCCAGGGGCGCTTCGCTGAGCATAAGGTCCTCAGCGGGGGACATATC
GCCATAGATGCGATTATTAAAGCAAAGGAGGAGGTTGATTTTGTGGTTGT
CAAAGGTGTTTAGATGGGTCCGGAGACATATGCCTATGATAATCGGAGTT
TGCAACAGGCCATAATGAAGGAGATGGAGCGAAATGGTTGGGTTGGCGTT
TGCTGTGAACCCAATCTGGTCTTTGTTGCGTGCAACCAGTTTCCGATCAT
TGCTATGCGCCTCAATGATGCACGTGATGGTATTAAGGTGGTAGATGAAG
TTCTTAAGAAATACAGAGCCGCCTTGGAGAAGAAGGATATGATTTCTCAG
GATGGTCTATTTAAGGATTGGATTAGCGTAAAACAGGGGCATACGGCAAC
GGCTCAAAGTGTGGGCCTCACGGCTTGGGCTGCTGCGTTTATGAATACGT
GGAATTCTGAATTTGTCCGCGCTGGCTTCAAAAATCATGTTGTTGGGTTC
ATCACTAACATCGATGGACAAGTTGAGCTTCAACATCCCATGGTCGCAGG
TGCTTACAGGGCAGCTCTGGCTCAAGGAGACGCAGCAAAAGGCCCGTCCC
AAGTTCTACAGGGCGCGCGTGAGTTCTATAAAGCCAACAAGTCGAACATC
AACTTTCCATACAACGAGCCAACTTTCGGGTATGTTGTTAAATGGCTCTC
GGAGTTGGGAAAGGCAACAGAGCTAAATGGAATTCTTGCATACGCTGATA
AGCACCTCCAACCAACCTGGGAAAATGGTGGTCTTTACTATCCTCGGAAT
GACCAAGCAACTGATAATGAAGGTCGCTGGACTCACATGGACCCCTTCTC
GGGTAACACTGCTATTGGCTACTCGCGGTTGAATGTGGAGAATGGACAGA
AGAAAATCTTTGAGGAGCCTTGGACAAAGGATACACTGGCTAGTCGTCCA
TACGTGGATGGGCTGGATCTCTCACAGGGCGTTGATTGCTTGCGAGGATT
GTGGGATCAGGATCGCAGCGCCCTCATTGTCACCGTCCGCGAATGGCCTG
GACAAGGGGCTAACATCAAGTTTCGAGTTGAGAATCTCTCATCTGGTACC
TGGACCGTTTATACTTCCCAGGGGCGCTTCGCTGAGCATAAGGTCCTCAG
CGGGGGACATATCGCCATAGATGCGATTATTAAAGCAAAGGAGGAGGTTG
ATTTTGTGGTTGTCAAAGGTGTTTAGATGGGTCCGGAGACATATGCCTAT
GATAATCGGAGTTTGCAACAGGCCATAATGAAGGAGATGGAGCGAAATGG
TTGGGTTGGCGTTTGCTGTGAACCCAATCTGGTCTTTGTTGCGTGCAACC
AGTTTCCGATCATTGCTATGCGCCTCAATGATGCACGTGATGGTATTAAG
GTGGTAGATGAAGTTCTTAAGAAATACAGAGCCGCCTTGGAGAAGAAGGA
TATGATTTCTCAGGATGGTCTATTTAAGGATTGGATTAGCGTAAAACAGG
GGCATACGGCAACGGCTCAAAGTGTGGGCCTCACGGCTTGGGCTGCTGCG
TTTATGAATACGTGGAATTCTGAATTTGTCCGCGCTGGCTTCAAAAATCA
TGTTGTTGGGTTCATCACTAACATCGATGGACAAGTTGAGCTTCAACATC
CCATGGTCGCAGGTGCTTACAGGGCAGCTCTGGCTCAAGGAGACGCAGCA
AAAGGCCCGTCCCAAGTTCTACAGGGCGCGCGTGAGTTCTATAAAGCCAA
CAAGTCGAACATCAACTTTCCATACAACGAGCCAACTTTCGGGTATGTTG
TTAAATGGCTCTCGGAGTTGGGAAAGGCAACAGAGCTAAATGGAATTCTT
GCATACGCTGATAAGCACCTCCAACCAACCTGGGAAAATGGTGGTCTTTA
CTATCCTCGGAATGACCAAGCAACTGATAATGAAGGTCGCTGGACTCACA
TGGACCCCTTCTCGGGTAACACTGCTATTGGCTACTCGCGGTTGAATGTG
GAGAATGGACAGAAGAAAATCTTTGAGGAGCCTTGGACAAAGGATACACT
GGCTAGTCGTCCATACGTGGATGGGCTGGATCTCTCACAGGGCGTTGATT
GCTTGCGAGGATTGTGGGATCAGGATCGCAGCGCCCTCATTGTCACCGTC
CGCGAATGGCCTGGACAAGGGGCTAACATCAAGTTTCGAGTTGAGAATCT
CTCATCTGGTACCTGGACCGTTTATACTTCCCAGGGGCGCTTCGCTGAGC
ATAAGGTCCTCAGCGGGGGACATATCGCCATAGATGCGATTATTAAAGCA
AAGGAGGAGGTTGATTTTGTGGTTGTCAAAGGTGTTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR041411 |
| DBxref | PFAM:PF18566 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:5491209..5492418 + |
|
