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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:31301..32062- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004531-T1 ID=KJC3_004531-T1|Name=KJC3_004531-T1|organism=Aspergillus niger KJC3|type=mRNA|length=762bp|location=Sequence derived from alignment at ch4:31301..32062- (Aspergillus niger KJC3)
GGCAGCTAAACGAACCAACCCCGCAAGGCCTTAACATTCCTTCTGATCCC
AATTCCCATTATCATCACCCCAACTATCATCATCTCATCATCTCATCATG
TCTACCTACGGCACCCGCGACCGTATTTTGCGTCTGCGCATCGCCCACTA
CAAGACCGAGGACAAGACGGAAGCTGAAGCCCACAAGTTCGGCACTCTCT
TTGCCGAAAAGGCTGCCCATTTGCACGAAAAGCATGGCATTTGGGGATAC
GCTCAAGTAAAATTTCTTTCCCCCGCTCCCCTCGGGCCCCAAATTGTCCC
GGACTGAACTCTTTTCTGTAGGTCTACACCCCCGAGAAGACCCGCAAGGT
CGTCGAAGCCATGAATCAGAAGGCGAACCGGGGCTGGGTAATAGACGATC
ATGACTTTGCCGTCGAATTCTACTTCAAGACGCTCGAGGACCTCTCCAAG
GTCAGCCGGGACCCGGAATTCCACGCTCTGCAGGCGGAGGAGGTGCCCTA
CATTTCCAAGCACCATGTGGTCACCAGTCTCGGTTGGGTCGAAACGTTTG
TCGAGCACGGCAAGGTGGTGCACATTGAGAACGGCAAGTCGACCTACGGA
ACGTTCGAGGAGATGCAGGAGATTACCATGGATCCCAACTACCGCAAGCC
CGCGGACGGCACCAACAACTCGCAGTAGGCGAATACTTAACGAGGGAGTT
AGCACGCCCGAGTAACTTAGCGAGCCTGCACAAATCCTATGTTAATTGAC
ACCCAATCTCAC back to topCoding sequence (CDS) from alignment at ch4:31301..32062- >KJC3_004531-T1 ID=KJC3_004531-T1|Name=KJC3_004531-T1|organism=Aspergillus niger KJC3|type=CDS|length=1032bp|location=Sequence derived from alignment at ch4:31301..32062- (Aspergillus niger KJC3)
GTCTACACCCCCGAGAAGACCCGCAAGGTCGTCGAAGCCATGAATCAGAA
GGCGAACCGGGGCTGGGTAATAGACGATCATGACTTTGCCGTCGAATTCT
ACTTCAAGACGCTCGAGGACCTCTCCAAGGTCAGCCGGGACCCGGAATTC
CACGCTCTGCAGGCGGAGGAGGTGCCCTACATTTCCAAGCACCATGTGGT
CACCAGTCTCGGTTGGGTCGAAACGTTTGTCGAGCACGGCAAGGTGGTGC
ACATTGAGAACGGCAAGTCGACCTACGGAACGTTCGAGGAGATGCAGGAG
ATTACCATGGATCCCAACTACCGCAAGCCCGCGGACGGCACCAACAACTC
GCAGTAGATGTCTACCTACGGCACCCGCGACCGTATTTTGCGTCTGCGCA
TCGCCCACTACAAGACCGAGGACAAGACGGAAGCTGAAGCCCACAAGTTC
GGCACTCTCTTTGCCGAAAAGGCTGCCCATTTGCACGAAAAGCATGGCAT
TTGGGGATACGCTCAAGTCTACACCCCCGAGAAGACCCGCAAGGTCGTCG
AAGCCATGAATCAGAAGGCGAACCGGGGCTGGGTAATAGACGATCATGAC
TTTGCCGTCGAATTCTACTTCAAGACGCTCGAGGACCTCTCCAAGGTCAG
CCGGGACCCGGAATTCCACGCTCTGCAGGCGGAGGAGGTGCCCTACATTT
CCAAGCACCATGTGGTCACCAGTCTCGGTTGGGTCGAAACGTTTGTCGAG
CACGGCAAGGTGGTGCACATTGAGAACGGCAAGTCGACCTACGGAACGTT
CGAGGAGATGCAGGAGATTACCATGGATCCCAACTACCGCAAGCCCGCGG
ACGGCACCAACAACTCGCAGTAGATGTCTACCTACGGCACCCGCGACCGT
ATTTTGCGTCTGCGCATCGCCCACTACAAGACCGAGGACAAGACGGAAGC
TGAAGCCCACAAGTTCGGCACTCTCTTTGCCGAAAAGGCTGCCCATTTGC
ACGAAAAGCATGGCATTTGGGGATACGCTCAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004531-T1.utr3p1 | KJC3_004531-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004531-T1.utr5p1 | KJC3_004531-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.1 |
| Note | antiSMASH:Cluster_4.2 |
| DBxref | InterPro:IPR009799 |
| DBxref | PFAM:PF07110 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:31301..32062 - |
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