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KJC3_004543-T1, KJC3_004543-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004543-T1
Unique NameKJC3_004543-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:60455..62469-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004543-T1 ID=KJC3_004543-T1|Name=KJC3_004543-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2015bp|location=Sequence derived from alignment at ch4:60455..62469- (Aspergillus niger KJC3)
TGTCTCCCGAAGCCGTCTCCACGTTTACCCCAGGATCAGTGACTTCGGTT
CGACGCGGCGGCAATGGAGCCAAGCTACAGCCCAAACACCGACCCCAGCT
TGTGGTTGGGGTTTACTGGAGATACCCACCAAGTCAGTAAGGCACCAGTT
TACCATGTCCTAGCCTCACTGCTCGTATATAGCTGGAGGCTGCTACCTAG
CTTTCTCATTACGGTTTTGGCACTTAGCAGAGCAGGCATCCGACATTCCA
GCCAAAATGGCCAAACTATCAACATTACTCTCCGCTGTCTTCTTGGCCAT
TGGAGGTAGACATTTTTTCTCCTACTTCCTCTTGAACATAAAGGTGGAAA
CTCATTAATAACTCCGGTGACGACGAATAGGCTTTCTTTTCGGATATGAC
AGTGGTATCATTACCTCGACGATCGGCCAAACCGAGTTCATTCGATATTT
TAACAACCCGAACGATACGGTGACGGGGGGTGTGGTATCCGCCTTCCAAG
GAGGTGCCATTCTCGGAACCATCATCAACATCTTCACTGGTGATCGACCG
GGACGGAAAATGTCCGTCTTTGTCGGTGCCTGCATTTCCATTGTGGGCTG
CGCGCTGCAAGGCGGAGCGATCAACATGACCATGCTCATCATCGGTCGGT
TCATTGCGGGTGTAGCTGTGGGCATGCTGACCGCCACCGTGCCCATGTAC
GCCGGTGAGATGGCCGAAGCCGCATCCCGCGGAATGATGTCGGGTCTACT
GCAGTGGATGTTGAGTTGGGGGTCTTTAGTTGCGCAGTGGTTGGGATATG
GATGTTCCTTCAATAGTACCGATTTCCAATGTGCATCTCCCCCTATTATG
GCTTGTTTATGCTGCATGTGTACGAAGTGTCTAACCTATATCCACAGGGC
GCTTTCCACTTGCGTTTCAATGCGTCCCTGGTCTTGTTCTCATGACCGGT
GTCTGGTTTCTCCAGGAATCCCCCCGTTGGTTGATGGAACAAGACCGCCA
CGAGGAGGCGTTGGCTACACTACACCACCTGCATGGCGACGGCACTCCGG
AAAAGTCGCAGTACATCGAGCTGGAGTATCAAGAGATCCGGGACACCATC
GAGGCGGAGCGCGCACACAACACCATTACTTGGACCTCCATCCTCACCAA
ACCTTCCTGGCGCCGTCGCCTCATCCTCGGCTGCGGTGTGCAGGCCTTTG
GCCCATTGTCAGGAATCAATGTCATAAACTACTATGGGACGCGCATCTAC
AGCTCATTGGGCATCGACACGCGCACCACCCTGATGATCATCGGTATCTC
AGGCGGCCTGTCGATTATCTATTGCACCATCGGGCTCTGGGCTCTGGAGC
GGGTGGGTCGGATCCGACCGCTAATCGTCTCAGCGGCGGGCATGGCAGCA
GCACTGGTTTGCAATGCAGCCATGTCCCAGCATTACAATGAAAGTAACAC
TAATCAGCTACGGGCAATGGTCGCAATGAACTTCGTCTTCAGCCTGTTCT
ATACATCGCCTGGTATCATCTCCTGGGTCTACCCTGCGGAGATCTTCCCC
GTGGATATTCGTAACCAAGGCAATTCCATCACCACTTTTACTAATTGGAC
TGTCAATCTGGTCTTCGCACAGTTCTCGCCTACAGCCCTGTCCAACATTG
GCTTCCGTTACTTTTACGTCTTCTTCGTCTTCAACCTCATTGCTATGATC
TGCTATATCTTCTTCTTCCCGGAGACCAAGGGCAAGACCCTCGAACAGAT
GGACGAGCTGTTCGGGGACGTGATGACTCCTCCTGGAGACCTAAAGGGGA
CGGATGAGCCCCAAGTAACAATGATTGAAGACGCTATGAATGTTTCATCC
TAAGCCATGGTACGTTGTTTCCCCATTGGCTGTTGGAATAGGGGGGTATG
TTTTCAGTAACTATGTGAGACGCTTGGCGAACACTTGCTTTTCGAGTTTT
GGGGTTTGAACAGATCTGTCACCGTGTCGTCATATACATAGTCTCAAGCT
CCCCTGTGTGTGCGG
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Coding sequence (CDS) from alignment at ch4:60455..62469-

>KJC3_004543-T1 ID=KJC3_004543-T1|Name=KJC3_004543-T1|organism=Aspergillus niger KJC3|type=CDS|length=4365bp|location=Sequence derived from alignment at ch4:60455..62469- (Aspergillus niger KJC3)
GGCGCTTTCCACTTGCGTTTCAATGCGTCCCTGGTCTTGTTCTCATGACC
GGTGTCTGGTTTCTCCAGGAATCCCCCCGTTGGTTGATGGAACAAGACCG
CCACGAGGAGGCGTTGGCTACACTACACCACCTGCATGGCGACGGCACTC
CGGAAAAGTCGCAGTACATCGAGCTGGAGTATCAAGAGATCCGGGACACC
ATCGAGGCGGAGCGCGCACACAACACCATTACTTGGACCTCCATCCTCAC
CAAACCTTCCTGGCGCCGTCGCCTCATCCTCGGCTGCGGTGTGCAGGCCT
TTGGCCCATTGTCAGGAATCAATGTCATAAACTACTATGGGACGCGCATC
TACAGCTCATTGGGCATCGACACGCGCACCACCCTGATGATCATCGGTAT
CTCAGGCGGCCTGTCGATTATCTATTGCACCATCGGGCTCTGGGCTCTGG
AGCGGGTGGGTCGGATCCGACCGCTAATCGTCTCAGCGGCGGGCATGGCA
GCAGCACTGGTTTGCAATGCAGCCATGTCCCAGCATTACAATGAAAGTAA
CACTAATCAGCTACGGGCAATGGTCGCAATGAACTTCGTCTTCAGCCTGT
TCTATACATCGCCTGGTATCATCTCCTGGGTCTACCCTGCGGAGATCTTC
CCCGTGGATATTCGTAACCAAGGCAATTCCATCACCACTTTTACTAATTG
GACTGTCAATCTGGTCTTCGCACAGTTCTCGCCTACAGCCCTGTCCAACA
TTGGCTTCCGTTACTTTTACGTCTTCTTCGTCTTCAACCTCATTGCTATG
ATCTGCTATATCTTCTTCTTCCCGGAGACCAAGGGCAAGACCCTCGAACA
GATGGACGAGCTGTTCGGGGACGTGATGACTCCTCCTGGAGACCTAAAGG
GGACGGATGAGCCCCAAGTAACAATGATTGAAGACGCTATGAATGTTTCA
TCCTAAGCTTTCTTTTCGGATATGACAGTGGTATCATTACCTCGACGATC
GGCCAAACCGAGTTCATTCGATATTTTAACAACCCGAACGATACGGTGAC
GGGGGGTGTGGTATCCGCCTTCCAAGGAGGTGCCATTCTCGGAACCATCA
TCAACATCTTCACTGGTGATCGACCGGGACGGAAAATGTCCGTCTTTGTC
GGTGCCTGCATTTCCATTGTGGGCTGCGCGCTGCAAGGCGGAGCGATCAA
CATGACCATGCTCATCATCGGTCGGTTCATTGCGGGTGTAGCTGTGGGCA
TGCTGACCGCCACCGTGCCCATGTACGCCGGTGAGATGGCCGAAGCCGCA
TCCCGCGGAATGATGTCGGGTCTACTGCAGTGGATGTTGAGTTGGGGGTC
TTTAGTTGCGCAGTGGTTGGGATATGGATGTTCCTTCAATAGTACCGATT
TCCAATATGGCCAAACTATCAACATTACTCTCCGCTGTCTTCTTGGCCAT
TGGAGGGCGCTTTCCACTTGCGTTTCAATGCGTCCCTGGTCTTGTTCTCA
TGACCGGTGTCTGGTTTCTCCAGGAATCCCCCCGTTGGTTGATGGAACAA
GACCGCCACGAGGAGGCGTTGGCTACACTACACCACCTGCATGGCGACGG
CACTCCGGAAAAGTCGCAGTACATCGAGCTGGAGTATCAAGAGATCCGGG
ACACCATCGAGGCGGAGCGCGCACACAACACCATTACTTGGACCTCCATC
CTCACCAAACCTTCCTGGCGCCGTCGCCTCATCCTCGGCTGCGGTGTGCA
GGCCTTTGGCCCATTGTCAGGAATCAATGTCATAAACTACTATGGGACGC
GCATCTACAGCTCATTGGGCATCGACACGCGCACCACCCTGATGATCATC
GGTATCTCAGGCGGCCTGTCGATTATCTATTGCACCATCGGGCTCTGGGC
TCTGGAGCGGGTGGGTCGGATCCGACCGCTAATCGTCTCAGCGGCGGGCA
TGGCAGCAGCACTGGTTTGCAATGCAGCCATGTCCCAGCATTACAATGAA
AGTAACACTAATCAGCTACGGGCAATGGTCGCAATGAACTTCGTCTTCAG
CCTGTTCTATACATCGCCTGGTATCATCTCCTGGGTCTACCCTGCGGAGA
TCTTCCCCGTGGATATTCGTAACCAAGGCAATTCCATCACCACTTTTACT
AATTGGACTGTCAATCTGGTCTTCGCACAGTTCTCGCCTACAGCCCTGTC
CAACATTGGCTTCCGTTACTTTTACGTCTTCTTCGTCTTCAACCTCATTG
CTATGATCTGCTATATCTTCTTCTTCCCGGAGACCAAGGGCAAGACCCTC
GAACAGATGGACGAGCTGTTCGGGGACGTGATGACTCCTCCTGGAGACCT
AAAGGGGACGGATGAGCCCCAAGTAACAATGATTGAAGACGCTATGAATG
TTTCATCCTAAGCTTTCTTTTCGGATATGACAGTGGTATCATTACCTCGA
CGATCGGCCAAACCGAGTTCATTCGATATTTTAACAACCCGAACGATACG
GTGACGGGGGGTGTGGTATCCGCCTTCCAAGGAGGTGCCATTCTCGGAAC
CATCATCAACATCTTCACTGGTGATCGACCGGGACGGAAAATGTCCGTCT
TTGTCGGTGCCTGCATTTCCATTGTGGGCTGCGCGCTGCAAGGCGGAGCG
ATCAACATGACCATGCTCATCATCGGTCGGTTCATTGCGGGTGTAGCTGT
GGGCATGCTGACCGCCACCGTGCCCATGTACGCCGGTGAGATGGCCGAAG
CCGCATCCCGCGGAATGATGTCGGGTCTACTGCAGTGGATGTTGAGTTGG
GGGTCTTTAGTTGCGCAGTGGTTGGGATATGGATGTTCCTTCAATAGTAC
CGATTTCCAATATGGCCAAACTATCAACATTACTCTCCGCTGTCTTCTTG
GCCATTGGAGGGCGCTTTCCACTTGCGTTTCAATGCGTCCCTGGTCTTGT
TCTCATGACCGGTGTCTGGTTTCTCCAGGAATCCCCCCGTTGGTTGATGG
AACAAGACCGCCACGAGGAGGCGTTGGCTACACTACACCACCTGCATGGC
GACGGCACTCCGGAAAAGTCGCAGTACATCGAGCTGGAGTATCAAGAGAT
CCGGGACACCATCGAGGCGGAGCGCGCACACAACACCATTACTTGGACCT
CCATCCTCACCAAACCTTCCTGGCGCCGTCGCCTCATCCTCGGCTGCGGT
GTGCAGGCCTTTGGCCCATTGTCAGGAATCAATGTCATAAACTACTATGG
GACGCGCATCTACAGCTCATTGGGCATCGACACGCGCACCACCCTGATGA
TCATCGGTATCTCAGGCGGCCTGTCGATTATCTATTGCACCATCGGGCTC
TGGGCTCTGGAGCGGGTGGGTCGGATCCGACCGCTAATCGTCTCAGCGGC
GGGCATGGCAGCAGCACTGGTTTGCAATGCAGCCATGTCCCAGCATTACA
ATGAAAGTAACACTAATCAGCTACGGGCAATGGTCGCAATGAACTTCGTC
TTCAGCCTGTTCTATACATCGCCTGGTATCATCTCCTGGGTCTACCCTGC
GGAGATCTTCCCCGTGGATATTCGTAACCAAGGCAATTCCATCACCACTT
TTACTAATTGGACTGTCAATCTGGTCTTCGCACAGTTCTCGCCTACAGCC
CTGTCCAACATTGGCTTCCGTTACTTTTACGTCTTCTTCGTCTTCAACCT
CATTGCTATGATCTGCTATATCTTCTTCTTCCCGGAGACCAAGGGCAAGA
CCCTCGAACAGATGGACGAGCTGTTCGGGGACGTGATGACTCCTCCTGGA
GACCTAAAGGGGACGGATGAGCCCCAAGTAACAATGATTGAAGACGCTAT
GAATGTTTCATCCTAAGCTTTCTTTTCGGATATGACAGTGGTATCATTAC
CTCGACGATCGGCCAAACCGAGTTCATTCGATATTTTAACAACCCGAACG
ATACGGTGACGGGGGGTGTGGTATCCGCCTTCCAAGGAGGTGCCATTCTC
GGAACCATCATCAACATCTTCACTGGTGATCGACCGGGACGGAAAATGTC
CGTCTTTGTCGGTGCCTGCATTTCCATTGTGGGCTGCGCGCTGCAAGGCG
GAGCGATCAACATGACCATGCTCATCATCGGTCGGTTCATTGCGGGTGTA
GCTGTGGGCATGCTGACCGCCACCGTGCCCATGTACGCCGGTGAGATGGC
CGAAGCCGCATCCCGCGGAATGATGTCGGGTCTACTGCAGTGGATGTTGA
GTTGGGGGTCTTTAGTTGCGCAGTGGTTGGGATATGGATGTTCCTTCAAT
AGTACCGATTTCCAATATGGCCAAACTATCAACATTACTCTCCGCTGTCT
TCTTGGCCATTGGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004543KJC3_004543Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004543-T1KJC3_004543-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004543-T1.cdsKJC3_004543-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004543-T1.utr3p1KJC3_004543-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004543-T1.exon3KJC3_004543-T1.exon3Aspergillus niger KJC3exon
KJC3_004543-T1.exon2KJC3_004543-T1.exon2Aspergillus niger KJC3exon
KJC3_004543-T1.exon1KJC3_004543-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004543-T1.utr5p1KJC3_004543-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:60455..62469 -
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