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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:73124..74076+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004548-T1 ID=KJC3_004548-T1|Name=KJC3_004548-T1|organism=Aspergillus niger KJC3|type=mRNA|length=953bp|location=Sequence derived from alignment at ch4:73124..74076+ (Aspergillus niger KJC3)
CCACAAAGACCTAACGTGCAGTATGGATAGCCACAGTCCCATAATAGTCC
GTCTCCAAGGCCATATCGCCGTTGTAACCCTCAACCGTCCTGATAAGCTT
AACGCACTGGATCAGGACAATTATTATCAACTTGGTAAAATTTTCCGCCA
CCTGGAGAAAACACCCGACGTTACCATTACGGTCCTCACCGGCACAGGGC
GATACTTTTCAGCGTGAGATTAACAGGGCCTTTGGTTATGTCCACATAGC
TAATAAATTTATCAATTGTTCAAATAGCGGTACAGATGTCGGCTCTGCCT
TCCGAAACGGACCCTACGGAACAGATATGCGGCGCAACATGAGTGGCACT
TTGTTTAACAACCTGGACCTCACTCATACCCTTGCCAACTTTCCAAAGAT
CCTGATCGTGGCACTGAATGGGCCCGTCGTGGGGTTTCCGGCGGCGCTCA
TCGCGCAAGCAGACTTCATCTATGCAGCACCGCATACCTTCCTCCTCACA
CCATTCTCATCGCTCGGTGTTGCAGCGGAAGGTGCGGCTTCTCGTTCTTT
TGTGCAGCGCCTTGGTATGTCCAAAGCAAACGAGGCTTTGATCATGAGCA
AGCGGATTTCCTGCGGGGAACTGGTTGCCTGCGGCTTCGTCAATGGAGTG
GTGACTTCTCCTTCGGGGAAGCCAGACGACTCGGTCGGTTTTCTGAAGCA
AGTACTTGATGAAGTGCATAGGCGATTTGATTCACTTGCAGCAAGGTCTT
GTGTTGTAGGCATTAAGGACTTGATCCGTAAACCAGAGAGAATGATAAAT
GTCCAACAAAACTGCCTCGAAGTTTTTGCGGGACTGGATATGGTCGCAAC
AGGCGTGCCCGAGCAACACGTTCAGGCGCTGGTGAAAGGACAAAAGAAGC
ATAAATTGTGACTTCCTGACCATGTGGGGTTATGTCTGGTATTTTCCAAG
CTG back to topCoding sequence (CDS) from alignment at ch4:73124..74076+ >KJC3_004548-T1 ID=KJC3_004548-T1|Name=KJC3_004548-T1|organism=Aspergillus niger KJC3|type=CDS|length=1650bp|location=Sequence derived from alignment at ch4:73124..74076+ (Aspergillus niger KJC3)
ATGGATAGCCACAGTCCCATAATAGTCCGTCTCCAAGGCCATATCGCCGT
TGTAACCCTCAACCGTCCTGATAAGCTTAACGCACTGGATCAGGACAATT
ATTATCAACTTGGTAAAATTTTCCGCCACCTGGAGAAAACACCCGACGTT
ACCATTACGGTCCTCACCGGCACAGGGCGATACTTTTCAGCCGGTACAGA
TGTCGGCTCTGCCTTCCGAAACGGACCCTACGGAACAGATATGCGGCGCA
ACATGAGTGGCACTTTGTTTAACAACCTGGACCTCACTCATACCCTTGCC
AACTTTCCAAAGATCCTGATCGTGGCACTGAATGGGCCCGTCGTGGGGTT
TCCGGCGGCGCTCATCGCGCAAGCAGACTTCATCTATGCAGCACCGCATA
CCTTCCTCCTCACACCATTCTCATCGCTCGGTGTTGCAGCGGAAGGTGCG
GCTTCTCGTTCTTTTGTGCAGCGCCTTGGTATGTCCAAAGCAAACGAGGC
TTTGATCATGAGCAAGCGGATTTCCTGCGGGGAACTGGTTGCCTGCGGCT
TCGTCAATGGAGTGGTGACTTCTCCTTCGGGGAAGCCAGACGACTCGGTC
GGTTTTCTGAAGCAAGTACTTGATGAAGTGCATAGGCGATTTGATTCACT
TGCAGCAAGGTCTTGTGTTGTAGGCATTAAGGACTTGATCCGTAAACCAG
AGAGAATGATAAATGTCCAACAAAACTGCCTCGAAGTTTTTGCGGGACTG
GATATGGTCGCAACAGGCGTGCCCGAGCAACACGTTCAGGCGCTGGTGAA
AGGACAAAAGAAGCATAAATTGTGAATGGATAGCCACAGTCCCATAATAG
TCCGTCTCCAAGGCCATATCGCCGTTGTAACCCTCAACCGTCCTGATAAG
CTTAACGCACTGGATCAGGACAATTATTATCAACTTGGTAAAATTTTCCG
CCACCTGGAGAAAACACCCGACGTTACCATTACGGTCCTCACCGGCACAG
GGCGATACTTTTCAGCCGGTACAGATGTCGGCTCTGCCTTCCGAAACGGA
CCCTACGGAACAGATATGCGGCGCAACATGAGTGGCACTTTGTTTAACAA
CCTGGACCTCACTCATACCCTTGCCAACTTTCCAAAGATCCTGATCGTGG
CACTGAATGGGCCCGTCGTGGGGTTTCCGGCGGCGCTCATCGCGCAAGCA
GACTTCATCTATGCAGCACCGCATACCTTCCTCCTCACACCATTCTCATC
GCTCGGTGTTGCAGCGGAAGGTGCGGCTTCTCGTTCTTTTGTGCAGCGCC
TTGGTATGTCCAAAGCAAACGAGGCTTTGATCATGAGCAAGCGGATTTCC
TGCGGGGAACTGGTTGCCTGCGGCTTCGTCAATGGAGTGGTGACTTCTCC
TTCGGGGAAGCCAGACGACTCGGTCGGTTTTCTGAAGCAAGTACTTGATG
AAGTGCATAGGCGATTTGATTCACTTGCAGCAAGGTCTTGTGTTGTAGGC
ATTAAGGACTTGATCCGTAAACCAGAGAGAATGATAAATGTCCAACAAAA
CTGCCTCGAAGTTTTTGCGGGACTGGATATGGTCGCAACAGGCGTGCCCG
AGCAACACGTTCAGGCGCTGGTGAAAGGACAAAAGAAGCATAAATTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004548-T1.utr5p1 | KJC3_004548-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004548-T1.utr3p1 | KJC3_004548-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029045 |
| DBxref | InterPro:IPR001753 |
| DBxref | PFAM:PF16113 |
| DBxref | PFAM:PF00378 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:73124..74076 + |
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