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KJC3_004550-T1, KJC3_004550-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004550-T1
Unique NameKJC3_004550-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:76432..78169-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004550-T1 ID=KJC3_004550-T1|Name=KJC3_004550-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1738bp|location=Sequence derived from alignment at ch4:76432..78169- (Aspergillus niger KJC3)
ATGTCGGTCCAAGATGAAGATAGTAATGCGCCTCTTCTTGGAGGAGATCC
TGCGTTGGAGTATGGAGGTATCGCGGGAACCTCGTCTAGCAAAGCCCATA
ATTCCTCGTTTCGGCAGAACTTGGGGACGGCCGAGGCGTTCAGCATCATC
ATTAGCATCGTAATCGGAAGCGGAATTTTCACCTCCCCTGGCGCCATAGA
CACCAATGTTCCCTCCCCTGGGGCAGCCCTGGTCGTCTGGTTCGTCGGGG
GTATCTTGGCATGGACAGGGGCTGCAACTATGGCTGAGCTCGGGACGGCG
ATTCCGGGAGAAGGTCCGTACAGATCGCGTTTTCAAGACTCCCTAATGGC
TCACTCTTTTCACCGCAGGAGGTGTTCAACCGTACCTTCAGTACATCTAT
GGTGAGGTGTTTGGCTTCCTTGCCGCCTGGACATGGGTCATCGCGGTGGT
GCCGGCATCGCTAGCAATCTTGAGCATCGTGTTCGTGGAAAGCATCTACT
CGGCGACTGGGGTGACCGATCAACCCAATACCATGACACATAAAATTCTA
TCCGCTCTTTTATTGCTCCTCATCAGCATGGCAAACTCGGTCAGCACCCA
GTTCAGTACGCGGCTGAATAGATTCTTTGTCACCACCAAGTTTGCCGCCA
TCTTGGTTACTGTAGTTGCTGGACTGGGCGTCGTCGTCTATCACCTTGCT
AGTTGGGATAGAGTGAGTCCATCGGCACCCCAGGACTGGCTAGCCAGAGA
CTGGTTTGCTGCGCGCAACGCAATTGGTTTAGATGGCAGGGAGATAGAAT
GGCAGAATTTACACGGGTGGGAGACTCTTGGTCATTACTCCGCCGCGCTC
TATGGCGCACTATGGGCGTATTCAGGATGGGACAAGGTATGATACAGCCC
TTTCACTACCAAATTAGTTGTTGGAGTATCCTCACCTTGACGGACGCTCC
ATTCCCAGGCAATCTATATCAGCGTCGAACTCTCTGCTCCGGCTCGTCAG
CTGCCTCTAGCCATCAACAAGGCCATTCCCATTGTCATCCTAAGTTTTAT
CGCAGTGAATGTTGCGTACTACATTCTTTTACCCTGGAATGTAGTGTCAA
CAACTGATAGTGTGGCAGTTGTATGGTTCTCTCCTGGGTGTCACTGATAG
GAAAAGTGAGCCAGTTTCACCGGCTGACATTCATCGCAGACATCGTTCAA
CCACCTCCTTGGACCTGCATTTGGTGCCACCGTGGCGGGTCTCATCTGTC
TAGTGGTAGCAGGATCCTTGCTGGGAAGTTCGTTCGTTGCCGGTCGCATG
GTGGTGGCCGCAGCCAATTCGAACTGGTTGCCCTCATTTCTGGGCCGCGT
GGGCTCGGTCTCAAGGCAGTCAGCCTCGACAGCAGATGCGCCCATCAATG
CGATTCTCTTCTCCACGGGCTGTTCCATCGTATACATCTTCTTCGGGAAC
TTTCGTGCCCTGGTGACTTTCAATGGTCTGGCGGAGTATACGTTTTTCTT
CTTGACCATGGTTGGCGCCATCGTCCTGCGGGTTCGTGAACCACAGCTCC
CCCGCCCGTATAAGCCGATGATCTGTATACCCCTTATATTCGCTCTAGTC
AGTGGGTGTGTGGTCACTCGTGGCGCTGTTTTTGCTCCCGTGCAGGCGAT
GGTGCTCATTGGATTGTGGCTGATGGGCCTGGGGTTCTACAGCGCGAGGA
GGCGATGGGTAGGCAAGAGAGAGGCGGAGAGAGGCTGA
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Coding sequence (CDS) from alignment at ch4:76432..78169-

>KJC3_004550-T1 ID=KJC3_004550-T1|Name=KJC3_004550-T1|organism=Aspergillus niger KJC3|type=CDS|length=6168bp|location=Sequence derived from alignment at ch4:76432..78169- (Aspergillus niger KJC3)
ACATCGTTCAACCACCTCCTTGGACCTGCATTTGGTGCCACCGTGGCGGG
TCTCATCTGTCTAGTGGTAGCAGGATCCTTGCTGGGAAGTTCGTTCGTTG
CCGGTCGCATGGTGGTGGCCGCAGCCAATTCGAACTGGTTGCCCTCATTT
CTGGGCCGCGTGGGCTCGGTCTCAAGGCAGTCAGCCTCGACAGCAGATGC
GCCCATCAATGCGATTCTCTTCTCCACGGGCTGTTCCATCGTATACATCT
TCTTCGGGAACTTTCGTGCCCTGGTGACTTTCAATGGTCTGGCGGAGTAT
ACGTTTTTCTTCTTGACCATGGTTGGCGCCATCGTCCTGCGGGTTCGTGA
ACCACAGCTCCCCCGCCCGTATAAGCCGATGATCTGTATACCCCTTATAT
TCGCTCTAGTCAGTGGGTGTGTGGTCACTCGTGGCGCTGTTTTTGCTCCC
GTGCAGGCGATGGTGCTCATTGGATTGTGGCTGATGGGCCTGGGGTTCTA
CAGCGCGAGGAGGCGATGGGTAGGCAAGAGAGAGGCGGAGAGAGGCTGAG
CAATCTATATCAGCGTCGAACTCTCTGCTCCGGCTCGTCAGCTGCCTCTA
GCCATCAACAAGGCCATTCCCATTGTCATCCTAAGTTTTATCGCAGTGAA
TGTTGCGTACTACATTCTTTTACCCTGGAATGTAGTGTCAACAACTGATA
GTGTGGCAGTTGAGGTGTTCAACCGTACCTTCAGTACATCTATGGTGAGG
TGTTTGGCTTCCTTGCCGCCTGGACATGGGTCATCGCGGTGGTGCCGGCA
TCGCTAGCAATCTTGAGCATCGTGTTCGTGGAAAGCATCTACTCGGCGAC
TGGGGTGACCGATCAACCCAATACCATGACACATAAAATTCTATCCGCTC
TTTTATTGCTCCTCATCAGCATGGCAAACTCGGTCAGCACCCAGTTCAGT
ACGCGGCTGAATAGATTCTTTGTCACCACCAAGTTTGCCGCCATCTTGGT
TACTGTAGTTGCTGGACTGGGCGTCGTCGTCTATCACCTTGCTAGTTGGG
ATAGAGTGAGTCCATCGGCACCCCAGGACTGGCTAGCCAGAGACTGGTTT
GCTGCGCGCAACGCAATTGGTTTAGATGGCAGGGAGATAGAATGGCAGAA
TTTACACGGGTGGGAGACTCTTGGTCATTACTCCGCCGCGCTCTATGGCG
CACTATGGGCGTATTCAGGATGGGACAAGATGTCGGTCCAAGATGAAGAT
AGTAATGCGCCTCTTCTTGGAGGAGATCCTGCGTTGGAGTATGGAGGTAT
CGCGGGAACCTCGTCTAGCAAAGCCCATAATTCCTCGTTTCGGCAGAACT
TGGGGACGGCCGAGGCGTTCAGCATCATCATTAGCATCGTAATCGGAAGC
GGAATTTTCACCTCCCCTGGCGCCATAGACACCAATGTTCCCTCCCCTGG
GGCAGCCCTGGTCGTCTGGTTCGTCGGGGGTATCTTGGCATGGACAGGGG
CTGCAACTATGGCTGAGCTCGGGACGGCGATTCCGGGAGAAGACATCGTT
CAACCACCTCCTTGGACCTGCATTTGGTGCCACCGTGGCGGGTCTCATCT
GTCTAGTGGTAGCAGGATCCTTGCTGGGAAGTTCGTTCGTTGCCGGTCGC
ATGGTGGTGGCCGCAGCCAATTCGAACTGGTTGCCCTCATTTCTGGGCCG
CGTGGGCTCGGTCTCAAGGCAGTCAGCCTCGACAGCAGATGCGCCCATCA
ATGCGATTCTCTTCTCCACGGGCTGTTCCATCGTATACATCTTCTTCGGG
AACTTTCGTGCCCTGGTGACTTTCAATGGTCTGGCGGAGTATACGTTTTT
CTTCTTGACCATGGTTGGCGCCATCGTCCTGCGGGTTCGTGAACCACAGC
TCCCCCGCCCGTATAAGCCGATGATCTGTATACCCCTTATATTCGCTCTA
GTCAGTGGGTGTGTGGTCACTCGTGGCGCTGTTTTTGCTCCCGTGCAGGC
GATGGTGCTCATTGGATTGTGGCTGATGGGCCTGGGGTTCTACAGCGCGA
GGAGGCGATGGGTAGGCAAGAGAGAGGCGGAGAGAGGCTGAGCAATCTAT
ATCAGCGTCGAACTCTCTGCTCCGGCTCGTCAGCTGCCTCTAGCCATCAA
CAAGGCCATTCCCATTGTCATCCTAAGTTTTATCGCAGTGAATGTTGCGT
ACTACATTCTTTTACCCTGGAATGTAGTGTCAACAACTGATAGTGTGGCA
GTTGAGGTGTTCAACCGTACCTTCAGTACATCTATGGTGAGGTGTTTGGC
TTCCTTGCCGCCTGGACATGGGTCATCGCGGTGGTGCCGGCATCGCTAGC
AATCTTGAGCATCGTGTTCGTGGAAAGCATCTACTCGGCGACTGGGGTGA
CCGATCAACCCAATACCATGACACATAAAATTCTATCCGCTCTTTTATTG
CTCCTCATCAGCATGGCAAACTCGGTCAGCACCCAGTTCAGTACGCGGCT
GAATAGATTCTTTGTCACCACCAAGTTTGCCGCCATCTTGGTTACTGTAG
TTGCTGGACTGGGCGTCGTCGTCTATCACCTTGCTAGTTGGGATAGAGTG
AGTCCATCGGCACCCCAGGACTGGCTAGCCAGAGACTGGTTTGCTGCGCG
CAACGCAATTGGTTTAGATGGCAGGGAGATAGAATGGCAGAATTTACACG
GGTGGGAGACTCTTGGTCATTACTCCGCCGCGCTCTATGGCGCACTATGG
GCGTATTCAGGATGGGACAAGATGTCGGTCCAAGATGAAGATAGTAATGC
GCCTCTTCTTGGAGGAGATCCTGCGTTGGAGTATGGAGGTATCGCGGGAA
CCTCGTCTAGCAAAGCCCATAATTCCTCGTTTCGGCAGAACTTGGGGACG
GCCGAGGCGTTCAGCATCATCATTAGCATCGTAATCGGAAGCGGAATTTT
CACCTCCCCTGGCGCCATAGACACCAATGTTCCCTCCCCTGGGGCAGCCC
TGGTCGTCTGGTTCGTCGGGGGTATCTTGGCATGGACAGGGGCTGCAACT
ATGGCTGAGCTCGGGACGGCGATTCCGGGAGAAGACATCGTTCAACCACC
TCCTTGGACCTGCATTTGGTGCCACCGTGGCGGGTCTCATCTGTCTAGTG
GTAGCAGGATCCTTGCTGGGAAGTTCGTTCGTTGCCGGTCGCATGGTGGT
GGCCGCAGCCAATTCGAACTGGTTGCCCTCATTTCTGGGCCGCGTGGGCT
CGGTCTCAAGGCAGTCAGCCTCGACAGCAGATGCGCCCATCAATGCGATT
CTCTTCTCCACGGGCTGTTCCATCGTATACATCTTCTTCGGGAACTTTCG
TGCCCTGGTGACTTTCAATGGTCTGGCGGAGTATACGTTTTTCTTCTTGA
CCATGGTTGGCGCCATCGTCCTGCGGGTTCGTGAACCACAGCTCCCCCGC
CCGTATAAGCCGATGATCTGTATACCCCTTATATTCGCTCTAGTCAGTGG
GTGTGTGGTCACTCGTGGCGCTGTTTTTGCTCCCGTGCAGGCGATGGTGC
TCATTGGATTGTGGCTGATGGGCCTGGGGTTCTACAGCGCGAGGAGGCGA
TGGGTAGGCAAGAGAGAGGCGGAGAGAGGCTGAGCAATCTATATCAGCGT
CGAACTCTCTGCTCCGGCTCGTCAGCTGCCTCTAGCCATCAACAAGGCCA
TTCCCATTGTCATCCTAAGTTTTATCGCAGTGAATGTTGCGTACTACATT
CTTTTACCCTGGAATGTAGTGTCAACAACTGATAGTGTGGCAGTTGAGGT
GTTCAACCGTACCTTCAGTACATCTATGGTGAGGTGTTTGGCTTCCTTGC
CGCCTGGACATGGGTCATCGCGGTGGTGCCGGCATCGCTAGCAATCTTGA
GCATCGTGTTCGTGGAAAGCATCTACTCGGCGACTGGGGTGACCGATCAA
CCCAATACCATGACACATAAAATTCTATCCGCTCTTTTATTGCTCCTCAT
CAGCATGGCAAACTCGGTCAGCACCCAGTTCAGTACGCGGCTGAATAGAT
TCTTTGTCACCACCAAGTTTGCCGCCATCTTGGTTACTGTAGTTGCTGGA
CTGGGCGTCGTCGTCTATCACCTTGCTAGTTGGGATAGAGTGAGTCCATC
GGCACCCCAGGACTGGCTAGCCAGAGACTGGTTTGCTGCGCGCAACGCAA
TTGGTTTAGATGGCAGGGAGATAGAATGGCAGAATTTACACGGGTGGGAG
ACTCTTGGTCATTACTCCGCCGCGCTCTATGGCGCACTATGGGCGTATTC
AGGATGGGACAAGATGTCGGTCCAAGATGAAGATAGTAATGCGCCTCTTC
TTGGAGGAGATCCTGCGTTGGAGTATGGAGGTATCGCGGGAACCTCGTCT
AGCAAAGCCCATAATTCCTCGTTTCGGCAGAACTTGGGGACGGCCGAGGC
GTTCAGCATCATCATTAGCATCGTAATCGGAAGCGGAATTTTCACCTCCC
CTGGCGCCATAGACACCAATGTTCCCTCCCCTGGGGCAGCCCTGGTCGTC
TGGTTCGTCGGGGGTATCTTGGCATGGACAGGGGCTGCAACTATGGCTGA
GCTCGGGACGGCGATTCCGGGAGAAGACATCGTTCAACCACCTCCTTGGA
CCTGCATTTGGTGCCACCGTGGCGGGTCTCATCTGTCTAGTGGTAGCAGG
ATCCTTGCTGGGAAGTTCGTTCGTTGCCGGTCGCATGGTGGTGGCCGCAG
CCAATTCGAACTGGTTGCCCTCATTTCTGGGCCGCGTGGGCTCGGTCTCA
AGGCAGTCAGCCTCGACAGCAGATGCGCCCATCAATGCGATTCTCTTCTC
CACGGGCTGTTCCATCGTATACATCTTCTTCGGGAACTTTCGTGCCCTGG
TGACTTTCAATGGTCTGGCGGAGTATACGTTTTTCTTCTTGACCATGGTT
GGCGCCATCGTCCTGCGGGTTCGTGAACCACAGCTCCCCCGCCCGTATAA
GCCGATGATCTGTATACCCCTTATATTCGCTCTAGTCAGTGGGTGTGTGG
TCACTCGTGGCGCTGTTTTTGCTCCCGTGCAGGCGATGGTGCTCATTGGA
TTGTGGCTGATGGGCCTGGGGTTCTACAGCGCGAGGAGGCGATGGGTAGG
CAAGAGAGAGGCGGAGAGAGGCTGAGCAATCTATATCAGCGTCGAACTCT
CTGCTCCGGCTCGTCAGCTGCCTCTAGCCATCAACAAGGCCATTCCCATT
GTCATCCTAAGTTTTATCGCAGTGAATGTTGCGTACTACATTCTTTTACC
CTGGAATGTAGTGTCAACAACTGATAGTGTGGCAGTTGAGGTGTTCAACC
GTACCTTCAGTACATCTATGGTGAGGTGTTTGGCTTCCTTGCCGCCTGGA
CATGGGTCATCGCGGTGGTGCCGGCATCGCTAGCAATCTTGAGCATCGTG
TTCGTGGAAAGCATCTACTCGGCGACTGGGGTGACCGATCAACCCAATAC
CATGACACATAAAATTCTATCCGCTCTTTTATTGCTCCTCATCAGCATGG
CAAACTCGGTCAGCACCCAGTTCAGTACGCGGCTGAATAGATTCTTTGTC
ACCACCAAGTTTGCCGCCATCTTGGTTACTGTAGTTGCTGGACTGGGCGT
CGTCGTCTATCACCTTGCTAGTTGGGATAGAGTGAGTCCATCGGCACCCC
AGGACTGGCTAGCCAGAGACTGGTTTGCTGCGCGCAACGCAATTGGTTTA
GATGGCAGGGAGATAGAATGGCAGAATTTACACGGGTGGGAGACTCTTGG
TCATTACTCCGCCGCGCTCTATGGCGCACTATGGGCGTATTCAGGATGGG
ACAAGATGTCGGTCCAAGATGAAGATAGTAATGCGCCTCTTCTTGGAGGA
GATCCTGCGTTGGAGTATGGAGGTATCGCGGGAACCTCGTCTAGCAAAGC
CCATAATTCCTCGTTTCGGCAGAACTTGGGGACGGCCGAGGCGTTCAGCA
TCATCATTAGCATCGTAATCGGAAGCGGAATTTTCACCTCCCCTGGCGCC
ATAGACACCAATGTTCCCTCCCCTGGGGCAGCCCTGGTCGTCTGGTTCGT
CGGGGGTATCTTGGCATGGACAGGGGCTGCAACTATGGCTGAGCTCGGGA
CGGCGATTCCGGGAGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004550KJC3_004550Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004550-T1KJC3_004550-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004550-T1.cdsKJC3_004550-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004550-T1.exon4KJC3_004550-T1.exon4Aspergillus niger KJC3exon
KJC3_004550-T1.exon3KJC3_004550-T1.exon3Aspergillus niger KJC3exon
KJC3_004550-T1.exon2KJC3_004550-T1.exon2Aspergillus niger KJC3exon
KJC3_004550-T1.exon1KJC3_004550-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR002293
DBxrefPFAM:PF13520
DBxrefPFAM:PF00324
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:76432..78169 -
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