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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:127339..129407- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004570-T1 ID=KJC3_004570-T1|Name=KJC3_004570-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2069bp|location=Sequence derived from alignment at ch4:127339..129407- (Aspergillus niger KJC3)
GTGATGTGTAATAATAGAATATATCTCAACCGCACAGTCTCCATCCGGCG
GCAGTATTTTTCTCGCCTCTCGCAGAATGTATTCAATCTCACCTTGCCCA
CGTCACAACTTTGGCCAGCAAGGATAATATACCCCGATCTGTCGGTCCAT
CCCATCATGCCAGCCTTATCGGGATGGTTGTATGACAGTCCAACTGTCCC
GGTTCCCACCATAGCCTCAATGACTGGATGATGCACTGCCGGCTAACTCT
CCCAATCAAATATCGATCACAGCCTTTAATAGGCTGAAAAGTACCTCGCT
GTTCTCCGCAAGCGTTCGATCCTCAATCCAGTTCAACGTTCAATCCAAGG
ACTGGATAACTGACCAGCTTGGAGATCCGTGGGGAAGTGGGCCGCCCGAC
CCAGACTTGCCGTCTCACTCAGCTAACAGCTTAGCTCTAGACTACTACGT
ACCGTATATTAGCTGCTGCTCCAGTTCCCCGCCTTCATCACATCGGCTTA
TTTCTCCCCTCCACAATACTCGCACCCACTGTGGCCAAATAATGTCGACC
GCTAAGTTCAGAGTCACTGAGCATATCATCCCCGCATGCTATGTCCGGGA
GTATGCGAGCAGTACCGTGGACCAGGAGGATGTGCTGCATCTCCACATCA
AGCAATACACGCCTCGCGATCTACCCGATCCCGTCCCAGCCGATGCTGTC
ACTATCATTGCAGCCCACGCGGTGGGCTTTCCCAAGGTAAATACTCCCCT
TTTCCAAGAATTGATGGGAGTGAGATGACCAGGCATAGGAGCTGTACGAG
CCGTTATGGGACGAGCTTCTCGTACGATCCGCTCAATCCAACTTTCACAT
CCGAGGTATCTGGATAGCCGATGTTGCCAACATGGGCATGAGCGGAGTTC
TGAACGAAGACAAACTCAGCATGGACTGTGCGTGACTGAACATGATTTGC
CCAGCCTCAATAATACCTTGCTAAGGATGTGTTCTAGGTTCATGGATGGA
CCATCCCCGCGATTTGCTCCTAATGATCAATCAATTCCGCGATCAGATGC
CGCGACCGCTAGTAGGAGTGGGCCACAGCTTCGGAGGTACCATCATGTGC
GTGTCCACTCGCTCCCATCGCCGGATTATTACTGACCTTTCCTTCAGTAC
GAATCTGGCACTGATGCACCCCCGTCTACTAACCTCGGTTATTCTCTTCG
ACCCGGTAATTCAACGACTACCACCCAAGATGGGCTTTGGTGCGGACCCG
CCCGGTCCTGTCAACTTCGCCCTGTGGCGTGACGACGTCTGGCCAAACCG
GGCGGCAGCAGCAGCAGCTTACAAGAAAGTCTTTAAGAAATGGGACCCTC
GGTGTCTCGAATTAATGGTGCAGTATGGGTTCCGGGATCTGCCCACGGCC
CTGCATCCCGACTTGGACGACAATGTAGACGCTGCCAACCCGCCGGTCAC
GCTGACCACGACCAAGTATCATGATGTGCTGGGTCAGATTAGGGAAAGGT
TCCATGCTCAAACGTCTGATGGCCAGGCACAGTTGGACCGCTCAACCCAT
GCGGACGTGGACCCTTCTGTTGCTGTCCTTCCGGTGTACCGCCCCGAACC
GCCCAGCACATTCAACAAACTGCCATCGCTGCGACCGTCAACACTCTTCT
TGCTCGGAGAAGCGAGTTACTTGAACCTCGATGATCTTCGCGAAGGAATC
AAGAGCTGTGGTCAAGGGGTTGGGGGAAGCGGGGGAAGAGACAAGGTCAA
GGAGATCATTCTACCCAAGCAAGGCCACTTCTTCGCCTTTGAAGCAGTCG
GAGAGACGGCCAGCCATTGTGCCAGCTGGTTAGATAAGGTTATGCGCGAA
TACCGAGTCGCTGAGCGGGAGTGGAAGGAAAAGAGACAAGAAATGGCCAA
ACGGGACCATTTGGTGCTGAGTGAAGAGTGGCACAGGGTGATCAAGCCTC
CCAGTTCATTCCGCGCAGCCAAGTCACGGAAAACCAAACTATGAGGTCTT
GGTAGTTGCCTTCCTCGTATAGCTGTGCTTTGATCTACAATAATAATACC
ACTATTTCATTGCTCCAGC back to topCoding sequence (CDS) from alignment at ch4:127339..129407- >KJC3_004570-T1 ID=KJC3_004570-T1|Name=KJC3_004570-T1|organism=Aspergillus niger KJC3|type=CDS|length=5160bp|location=Sequence derived from alignment at ch4:127339..129407- (Aspergillus niger KJC3)
TACGAATCTGGCACTGATGCACCCCCGTCTACTAACCTCGGTTATTCTCT
TCGACCCGGTAATTCAACGACTACCACCCAAGATGGGCTTTGGTGCGGAC
CCGCCCGGTCCTGTCAACTTCGCCCTGTGGCGTGACGACGTCTGGCCAAA
CCGGGCGGCAGCAGCAGCAGCTTACAAGAAAGTCTTTAAGAAATGGGACC
CTCGGTGTCTCGAATTAATGGTGCAGTATGGGTTCCGGGATCTGCCCACG
GCCCTGCATCCCGACTTGGACGACAATGTAGACGCTGCCAACCCGCCGGT
CACGCTGACCACGACCAAGTATCATGATGTGCTGGGTCAGATTAGGGAAA
GGTTCCATGCTCAAACGTCTGATGGCCAGGCACAGTTGGACCGCTCAACC
CATGCGGACGTGGACCCTTCTGTTGCTGTCCTTCCGGTGTACCGCCCCGA
ACCGCCCAGCACATTCAACAAACTGCCATCGCTGCGACCGTCAACACTCT
TCTTGCTCGGAGAAGCGAGTTACTTGAACCTCGATGATCTTCGCGAAGGA
ATCAAGAGCTGTGGTCAAGGGGTTGGGGGAAGCGGGGGAAGAGACAAGGT
CAAGGAGATCATTCTACCCAAGCAAGGCCACTTCTTCGCCTTTGAAGCAG
TCGGAGAGACGGCCAGCCATTGTGCCAGCTGGTTAGATAAGGTTATGCGC
GAATACCGAGTCGCTGAGCGGGAGTGGAAGGAAAAGAGACAAGAAATGGC
CAAACGGGACCATTTGGTGCTGAGTGAAGAGTGGCACAGGGTGATCAAGC
CTCCCAGTTCATTCCGCGCAGCCAAGTCACGGAAAACCAAACTATGAGTT
CATGGATGGACCATCCCCGCGATTTGCTCCTAATGATCAATCAATTCCGC
GATCAGATGCCGCGACCGCTAGTAGGAGTGGGCCACAGCTTCGGAGGTAC
CATCATGAGCTGTACGAGCCGTTATGGGACGAGCTTCTCGTACGATCCGC
TCAATCCAACTTTCACATCCGAGGTATCTGGATAGCCGATGTTGCCAACA
TGGGCATGAGCGGAGTTCTGAACGAAGACAAACTCAGCATGGACTATGTC
GACCGCTAAGTTCAGAGTCACTGAGCATATCATCCCCGCATGCTATGTCC
GGGAGTATGCGAGCAGTACCGTGGACCAGGAGGATGTGCTGCATCTCCAC
ATCAAGCAATACACGCCTCGCGATCTACCCGATCCCGTCCCAGCCGATGC
TGTCACTATCATTGCAGCCCACGCGGTGGGCTTTCCCAAGTACGAATCTG
GCACTGATGCACCCCCGTCTACTAACCTCGGTTATTCTCTTCGACCCGGT
AATTCAACGACTACCACCCAAGATGGGCTTTGGTGCGGACCCGCCCGGTC
CTGTCAACTTCGCCCTGTGGCGTGACGACGTCTGGCCAAACCGGGCGGCA
GCAGCAGCAGCTTACAAGAAAGTCTTTAAGAAATGGGACCCTCGGTGTCT
CGAATTAATGGTGCAGTATGGGTTCCGGGATCTGCCCACGGCCCTGCATC
CCGACTTGGACGACAATGTAGACGCTGCCAACCCGCCGGTCACGCTGACC
ACGACCAAGTATCATGATGTGCTGGGTCAGATTAGGGAAAGGTTCCATGC
TCAAACGTCTGATGGCCAGGCACAGTTGGACCGCTCAACCCATGCGGACG
TGGACCCTTCTGTTGCTGTCCTTCCGGTGTACCGCCCCGAACCGCCCAGC
ACATTCAACAAACTGCCATCGCTGCGACCGTCAACACTCTTCTTGCTCGG
AGAAGCGAGTTACTTGAACCTCGATGATCTTCGCGAAGGAATCAAGAGCT
GTGGTCAAGGGGTTGGGGGAAGCGGGGGAAGAGACAAGGTCAAGGAGATC
ATTCTACCCAAGCAAGGCCACTTCTTCGCCTTTGAAGCAGTCGGAGAGAC
GGCCAGCCATTGTGCCAGCTGGTTAGATAAGGTTATGCGCGAATACCGAG
TCGCTGAGCGGGAGTGGAAGGAAAAGAGACAAGAAATGGCCAAACGGGAC
CATTTGGTGCTGAGTGAAGAGTGGCACAGGGTGATCAAGCCTCCCAGTTC
ATTCCGCGCAGCCAAGTCACGGAAAACCAAACTATGAGTTCATGGATGGA
CCATCCCCGCGATTTGCTCCTAATGATCAATCAATTCCGCGATCAGATGC
CGCGACCGCTAGTAGGAGTGGGCCACAGCTTCGGAGGTACCATCATGAGC
TGTACGAGCCGTTATGGGACGAGCTTCTCGTACGATCCGCTCAATCCAAC
TTTCACATCCGAGGTATCTGGATAGCCGATGTTGCCAACATGGGCATGAG
CGGAGTTCTGAACGAAGACAAACTCAGCATGGACTATGTCGACCGCTAAG
TTCAGAGTCACTGAGCATATCATCCCCGCATGCTATGTCCGGGAGTATGC
GAGCAGTACCGTGGACCAGGAGGATGTGCTGCATCTCCACATCAAGCAAT
ACACGCCTCGCGATCTACCCGATCCCGTCCCAGCCGATGCTGTCACTATC
ATTGCAGCCCACGCGGTGGGCTTTCCCAAGTACGAATCTGGCACTGATGC
ACCCCCGTCTACTAACCTCGGTTATTCTCTTCGACCCGGTAATTCAACGA
CTACCACCCAAGATGGGCTTTGGTGCGGACCCGCCCGGTCCTGTCAACTT
CGCCCTGTGGCGTGACGACGTCTGGCCAAACCGGGCGGCAGCAGCAGCAG
CTTACAAGAAAGTCTTTAAGAAATGGGACCCTCGGTGTCTCGAATTAATG
GTGCAGTATGGGTTCCGGGATCTGCCCACGGCCCTGCATCCCGACTTGGA
CGACAATGTAGACGCTGCCAACCCGCCGGTCACGCTGACCACGACCAAGT
ATCATGATGTGCTGGGTCAGATTAGGGAAAGGTTCCATGCTCAAACGTCT
GATGGCCAGGCACAGTTGGACCGCTCAACCCATGCGGACGTGGACCCTTC
TGTTGCTGTCCTTCCGGTGTACCGCCCCGAACCGCCCAGCACATTCAACA
AACTGCCATCGCTGCGACCGTCAACACTCTTCTTGCTCGGAGAAGCGAGT
TACTTGAACCTCGATGATCTTCGCGAAGGAATCAAGAGCTGTGGTCAAGG
GGTTGGGGGAAGCGGGGGAAGAGACAAGGTCAAGGAGATCATTCTACCCA
AGCAAGGCCACTTCTTCGCCTTTGAAGCAGTCGGAGAGACGGCCAGCCAT
TGTGCCAGCTGGTTAGATAAGGTTATGCGCGAATACCGAGTCGCTGAGCG
GGAGTGGAAGGAAAAGAGACAAGAAATGGCCAAACGGGACCATTTGGTGC
TGAGTGAAGAGTGGCACAGGGTGATCAAGCCTCCCAGTTCATTCCGCGCA
GCCAAGTCACGGAAAACCAAACTATGAGTTCATGGATGGACCATCCCCGC
GATTTGCTCCTAATGATCAATCAATTCCGCGATCAGATGCCGCGACCGCT
AGTAGGAGTGGGCCACAGCTTCGGAGGTACCATCATGAGCTGTACGAGCC
GTTATGGGACGAGCTTCTCGTACGATCCGCTCAATCCAACTTTCACATCC
GAGGTATCTGGATAGCCGATGTTGCCAACATGGGCATGAGCGGAGTTCTG
AACGAAGACAAACTCAGCATGGACTATGTCGACCGCTAAGTTCAGAGTCA
CTGAGCATATCATCCCCGCATGCTATGTCCGGGAGTATGCGAGCAGTACC
GTGGACCAGGAGGATGTGCTGCATCTCCACATCAAGCAATACACGCCTCG
CGATCTACCCGATCCCGTCCCAGCCGATGCTGTCACTATCATTGCAGCCC
ACGCGGTGGGCTTTCCCAAGTACGAATCTGGCACTGATGCACCCCCGTCT
ACTAACCTCGGTTATTCTCTTCGACCCGGTAATTCAACGACTACCACCCA
AGATGGGCTTTGGTGCGGACCCGCCCGGTCCTGTCAACTTCGCCCTGTGG
CGTGACGACGTCTGGCCAAACCGGGCGGCAGCAGCAGCAGCTTACAAGAA
AGTCTTTAAGAAATGGGACCCTCGGTGTCTCGAATTAATGGTGCAGTATG
GGTTCCGGGATCTGCCCACGGCCCTGCATCCCGACTTGGACGACAATGTA
GACGCTGCCAACCCGCCGGTCACGCTGACCACGACCAAGTATCATGATGT
GCTGGGTCAGATTAGGGAAAGGTTCCATGCTCAAACGTCTGATGGCCAGG
CACAGTTGGACCGCTCAACCCATGCGGACGTGGACCCTTCTGTTGCTGTC
CTTCCGGTGTACCGCCCCGAACCGCCCAGCACATTCAACAAACTGCCATC
GCTGCGACCGTCAACACTCTTCTTGCTCGGAGAAGCGAGTTACTTGAACC
TCGATGATCTTCGCGAAGGAATCAAGAGCTGTGGTCAAGGGGTTGGGGGA
AGCGGGGGAAGAGACAAGGTCAAGGAGATCATTCTACCCAAGCAAGGCCA
CTTCTTCGCCTTTGAAGCAGTCGGAGAGACGGCCAGCCATTGTGCCAGCT
GGTTAGATAAGGTTATGCGCGAATACCGAGTCGCTGAGCGGGAGTGGAAG
GAAAAGAGACAAGAAATGGCCAAACGGGACCATTTGGTGCTGAGTGAAGA
GTGGCACAGGGTGATCAAGCCTCCCAGTTCATTCCGCGCAGCCAAGTCAC
GGAAAACCAAACTATGAGTTCATGGATGGACCATCCCCGCGATTTGCTCC
TAATGATCAATCAATTCCGCGATCAGATGCCGCGACCGCTAGTAGGAGTG
GGCCACAGCTTCGGAGGTACCATCATGAGCTGTACGAGCCGTTATGGGAC
GAGCTTCTCGTACGATCCGCTCAATCCAACTTTCACATCCGAGGTATCTG
GATAGCCGATGTTGCCAACATGGGCATGAGCGGAGTTCTGAACGAAGACA
AACTCAGCATGGACTATGTCGACCGCTAAGTTCAGAGTCACTGAGCATAT
CATCCCCGCATGCTATGTCCGGGAGTATGCGAGCAGTACCGTGGACCAGG
AGGATGTGCTGCATCTCCACATCAAGCAATACACGCCTCGCGATCTACCC
GATCCCGTCCCAGCCGATGCTGTCACTATCATTGCAGCCCACGCGGTGGG
CTTTCCCAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004570-T1.utr3p1 | KJC3_004570-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR000073 |
| DBxref | PFAM:PF12697 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:127339..129407 - |
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