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KJC3_004572-T1, KJC3_004572-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004572-T1
Unique NameKJC3_004572-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:130094..132547+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004572-T1 ID=KJC3_004572-T1|Name=KJC3_004572-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2454bp|location=Sequence derived from alignment at ch4:130094..132547+ (Aspergillus niger KJC3)
ACTAAGTACTAATTGGCGCCTCGGCAGGGGATTCAATTCATCCAAGATGC
GGGGAACATCAGGGATGGCTGATCATCCCCTGCTTCCTGTTCCCAATTTC
TTCGCTGCAACCTTCACCTCCCGTCATGAGCGCTGAAGGAAGGATTCGCA
AACGCATCCCCAAGTCATGTAAACGCTGCCACCGGCGCAAGCAGCGATGC
GTCGGCTACCCGACTTGTACCGGCTGCGAATCCGCCAAGCAGCCCTGTCT
GCGATCCGAGTCCGTTCCATCCTGGCACCATGCCATGTCCAAGGGGGCTT
TGGTGCATCGCATTGAAGTGCTTGAAGCACAGCTGGCTGCTGCACTGGAA
CAGATTCCTCCGGATTCGGATGCGCCACAGGAACAGATTTCGACGGGCAC
AAAACCGCAACAACGTGACTCCCGAGCTGGTGTGGTCTCGATGATGGCAA
TGAGCCATGAGGGGAGCGAGAATCTGGCATATCTGGGCCCCTCATCGGGC
ATGTCCATTGCAGAGGATCTGGGCCGTCTGGTGCAGAACGCCGTCTGGCT
TAGGTCCATCCCCATCAATGGCAGCCACCTTCAAGCTCTGCCTTGCGAGA
GAACCGCAGCCAGCACCACATTACCAAGCGATGCTGTTGGGATACGACTT
CTCAATGCATACTTCAAGGACATGCATACGCGTCTCCCGTTCCTGGATCG
CTCAGAGCTGATGCAGCTGCATGCGACCGTGCAGAAGCCTCAGTCGGATG
TGACGAGCGAGGCTGCACGGTTCAAATTATTCATGGTATATGCCATCGGT
GCAGCTATCCTACAAATGACCGAGACCTACGACTCCACGCCGCCAAGCGC
CTTTGTAGCGACGGCACTACAGCTGGAACCTTCACTAGGCGAATCGCAAT
CCTACACGAATCTCGAAGCCCTCATGTTACTGGTCCTCTATCACATGCGA
ACATCTTCTGCCACGCGAGTGTGGTATCTTATCGGTCTAGCCATGCGCAT
CTGTATCGATCTAGGATTGCACCGGGAATCCCAGTATCGAAGAATGCGAC
CGTACGAAGGGCAGGTGCGCCGGCGGTTGTTCTGGTCCGTCTACCTGGTT
GAGCGATACGTGGCCTGGTCATTGGGACGGCCGTTCAGTGTTCCGGAAGA
CGAAATCGATGTCCATGCGCCGGCTGATCTGGATGATTCGTGTACCAGTG
ACCAGCTGATTGAAGAGGCACTACGGAATTCAGTGGCTCCGCGTGAGCCG
GCGCGAGGAAGGAGTCTTCGGAGGTTCATCGCCTTGACTCGGTTGCAGCG
CATAATGTCGCAAATCCATACCCGGATTTACCGGACAGATAAGAGCACCG
CAACACTGGTCCCGGAGACAACACCTCTGGTGGCTGCGTTGGAGGAATTC
GAAAGATCGCTGCCACCAATGGCACCGGACGAGGATGATTTTGTTCATAT
GCATTGGAACAACGCCATTCGAATGCTCATTCAGCGATTCATAGGAATCT
TACCGCGCAGGGATCCTCTGATCGAAAAATGCCTGTATGCCTCGGGGCAG
ATGTGTCAGTGTTTCAAGCGACTGCGACAGCGAGATTCGTCGGGATATTC
TTTTCTCTTAGTCAACTCATTGTATATGGCTGGATTGACGATTTGGTGAG
TTCCTCCACTTCCTGCTGTTGCAATAGAATTAGCCTGACGAGATAGTCTT
TGCCTCTTCCGAGCCCCCCAGCTGTGGACAGTAGCCGTGTCGAATGATCT
GCGAGCCTGTTCTTCTGCGCTGTTCGTCATGGCCGAGAGAAATTCTAGTC
TGAAGAAGTATCGAGACGGCCTGGAGATGATCATCAACCGCGTGATGGAA
TACGTGAATGATGCAGCAAAGGCCAATTCCATGCCAAGTGAATCACAAAC
ACAAGAGGATGCTATTCCTACACCACATTCCGAGAGCGTCAGCGCACAGA
CAGAACTAACTACTGGGGATTCTCAGCTATCGGCTGGGTGGTTCGACTTT
CAGTATCCATTACCCCCTACGGGAGGATTGACCGGACACAATACATATGG
CCAGGGCTCTGCTACAGCAGATACACCTGAATTCTGGCATACATTCAGCG
ACATGTTCCCGGAGATATGGTCAAACGACCTATTAAGCATGGATATGTCC
GATGGACTGAACTGGTTTACCCCGGAATAGACCAAACAGATACCCATTTT
GACATCAAACTACCGTAAGCAACATAACTACAAATGAGCCGGAGACAACG
TATCCTCAATTCCCAGGTCCTCCCTCCTCGACTTACTCTCGGGATCAAAG
TATGGCACCTCGCCCACGCCGACAGCGCGATTGCCACTTCTGGGCCCGAA
TCCTTCGTGGTCACCGGTGGCCGTATGGAACACGCTGCGATTATCCCAGA
TGGCTATTTTGTTAGCAGAAACCACTTGCATGAAAGTAGTTGGGTAACAT
ACCG
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Coding sequence (CDS) from alignment at ch4:130094..132547+

>KJC3_004572-T1 ID=KJC3_004572-T1|Name=KJC3_004572-T1|organism=Aspergillus niger KJC3|type=CDS|length=4008bp|location=Sequence derived from alignment at ch4:130094..132547+ (Aspergillus niger KJC3)
ATGAGCGCTGAAGGAAGGATTCGCAAACGCATCCCCAAGTCATGTAAACG
CTGCCACCGGCGCAAGCAGCGATGCGTCGGCTACCCGACTTGTACCGGCT
GCGAATCCGCCAAGCAGCCCTGTCTGCGATCCGAGTCCGTTCCATCCTGG
CACCATGCCATGTCCAAGGGGGCTTTGGTGCATCGCATTGAAGTGCTTGA
AGCACAGCTGGCTGCTGCACTGGAACAGATTCCTCCGGATTCGGATGCGC
CACAGGAACAGATTTCGACGGGCACAAAACCGCAACAACGTGACTCCCGA
GCTGGTGTGGTCTCGATGATGGCAATGAGCCATGAGGGGAGCGAGAATCT
GGCATATCTGGGCCCCTCATCGGGCATGTCCATTGCAGAGGATCTGGGCC
GTCTGGTGCAGAACGCCGTCTGGCTTAGGTCCATCCCCATCAATGGCAGC
CACCTTCAAGCTCTGCCTTGCGAGAGAACCGCAGCCAGCACCACATTACC
AAGCGATGCTGTTGGGATACGACTTCTCAATGCATACTTCAAGGACATGC
ATACGCGTCTCCCGTTCCTGGATCGCTCAGAGCTGATGCAGCTGCATGCG
ACCGTGCAGAAGCCTCAGTCGGATGTGACGAGCGAGGCTGCACGGTTCAA
ATTATTCATGGTATATGCCATCGGTGCAGCTATCCTACAAATGACCGAGA
CCTACGACTCCACGCCGCCAAGCGCCTTTGTAGCGACGGCACTACAGCTG
GAACCTTCACTAGGCGAATCGCAATCCTACACGAATCTCGAAGCCCTCAT
GTTACTGGTCCTCTATCACATGCGAACATCTTCTGCCACGCGAGTGTGGT
ATCTTATCGGTCTAGCCATGCGCATCTGTATCGATCTAGGATTGCACCGG
GAATCCCAGTATCGAAGAATGCGACCGTACGAAGGGCAGGTGCGCCGGCG
GTTGTTCTGGTCCGTCTACCTGGTTGAGCGATACGTGGCCTGGTCATTGG
GACGGCCGTTCAGTGTTCCGGAAGACGAAATCGATGTCCATGCGCCGGCT
GATCTGGATGATTCGTGTACCAGTGACCAGCTGATTGAAGAGGCACTACG
GAATTCAGTGGCTCCGCGTGAGCCGGCGCGAGGAAGGAGTCTTCGGAGGT
TCATCGCCTTGACTCGGTTGCAGCGCATAATGTCGCAAATCCATACCCGG
ATTTACCGGACAGATAAGAGCACCGCAACACTGGTCCCGGAGACAACACC
TCTGGTGGCTGCGTTGGAGGAATTCGAAAGATCGCTGCCACCAATGGCAC
CGGACGAGGATGATTTTGTTCATATGCATTGGAACAACGCCATTCGAATG
CTCATTCAGCGATTCATAGGAATCTTACCGCGCAGGGATCCTCTGATCGA
AAAATGCCTGTATGCCTCGGGGCAGATGTGTCAGTGTTTCAAGCGACTGC
GACAGCGAGATTCGTCGGGATATTCTTTTCTCTTAGTCAACTCATTGTAT
ATGGCTGGATTGACGATTTGTCTTTGCCTCTTCCGAGCCCCCCAGCTGTG
GACAGTAGCCGTGTCGAATGATCTGCGAGCCTGTTCTTCTGCGCTGTTCG
TCATGGCCGAGAGAAATTCTAGTCTGAAGAAGTATCGAGACGGCCTGGAG
ATGATCATCAACCGCGTGATGGAATACGTGAATGATGCAGCAAAGGCCAA
TTCCATGCCAAGTGAATCACAAACACAAGAGGATGCTATTCCTACACCAC
ATTCCGAGAGCGTCAGCGCACAGACAGAACTAACTACTGGGGATTCTCAG
CTATCGGCTGGGTGGTTCGACTTTCAGTATCCATTACCCCCTACGGGAGG
ATTGACCGGACACAATACATATGGCCAGGGCTCTGCTACAGCAGATACAC
CTGAATTCTGGCATACATTCAGCGACATGTTCCCGGAGATATGGTCAAAC
GACCTATTAAGCATGGATATGTCCGATGGACTGAACTGGTTTACCCCGGA
ATAGATGAGCGCTGAAGGAAGGATTCGCAAACGCATCCCCAAGTCATGTA
AACGCTGCCACCGGCGCAAGCAGCGATGCGTCGGCTACCCGACTTGTACC
GGCTGCGAATCCGCCAAGCAGCCCTGTCTGCGATCCGAGTCCGTTCCATC
CTGGCACCATGCCATGTCCAAGGGGGCTTTGGTGCATCGCATTGAAGTGC
TTGAAGCACAGCTGGCTGCTGCACTGGAACAGATTCCTCCGGATTCGGAT
GCGCCACAGGAACAGATTTCGACGGGCACAAAACCGCAACAACGTGACTC
CCGAGCTGGTGTGGTCTCGATGATGGCAATGAGCCATGAGGGGAGCGAGA
ATCTGGCATATCTGGGCCCCTCATCGGGCATGTCCATTGCAGAGGATCTG
GGCCGTCTGGTGCAGAACGCCGTCTGGCTTAGGTCCATCCCCATCAATGG
CAGCCACCTTCAAGCTCTGCCTTGCGAGAGAACCGCAGCCAGCACCACAT
TACCAAGCGATGCTGTTGGGATACGACTTCTCAATGCATACTTCAAGGAC
ATGCATACGCGTCTCCCGTTCCTGGATCGCTCAGAGCTGATGCAGCTGCA
TGCGACCGTGCAGAAGCCTCAGTCGGATGTGACGAGCGAGGCTGCACGGT
TCAAATTATTCATGGTATATGCCATCGGTGCAGCTATCCTACAAATGACC
GAGACCTACGACTCCACGCCGCCAAGCGCCTTTGTAGCGACGGCACTACA
GCTGGAACCTTCACTAGGCGAATCGCAATCCTACACGAATCTCGAAGCCC
TCATGTTACTGGTCCTCTATCACATGCGAACATCTTCTGCCACGCGAGTG
TGGTATCTTATCGGTCTAGCCATGCGCATCTGTATCGATCTAGGATTGCA
CCGGGAATCCCAGTATCGAAGAATGCGACCGTACGAAGGGCAGGTGCGCC
GGCGGTTGTTCTGGTCCGTCTACCTGGTTGAGCGATACGTGGCCTGGTCA
TTGGGACGGCCGTTCAGTGTTCCGGAAGACGAAATCGATGTCCATGCGCC
GGCTGATCTGGATGATTCGTGTACCAGTGACCAGCTGATTGAAGAGGCAC
TACGGAATTCAGTGGCTCCGCGTGAGCCGGCGCGAGGAAGGAGTCTTCGG
AGGTTCATCGCCTTGACTCGGTTGCAGCGCATAATGTCGCAAATCCATAC
CCGGATTTACCGGACAGATAAGAGCACCGCAACACTGGTCCCGGAGACAA
CACCTCTGGTGGCTGCGTTGGAGGAATTCGAAAGATCGCTGCCACCAATG
GCACCGGACGAGGATGATTTTGTTCATATGCATTGGAACAACGCCATTCG
AATGCTCATTCAGCGATTCATAGGAATCTTACCGCGCAGGGATCCTCTGA
TCGAAAAATGCCTGTATGCCTCGGGGCAGATGTGTCAGTGTTTCAAGCGA
CTGCGACAGCGAGATTCGTCGGGATATTCTTTTCTCTTAGTCAACTCATT
GTATATGGCTGGATTGACGATTTGTCTTTGCCTCTTCCGAGCCCCCCAGC
TGTGGACAGTAGCCGTGTCGAATGATCTGCGAGCCTGTTCTTCTGCGCTG
TTCGTCATGGCCGAGAGAAATTCTAGTCTGAAGAAGTATCGAGACGGCCT
GGAGATGATCATCAACCGCGTGATGGAATACGTGAATGATGCAGCAAAGG
CCAATTCCATGCCAAGTGAATCACAAACACAAGAGGATGCTATTCCTACA
CCACATTCCGAGAGCGTCAGCGCACAGACAGAACTAACTACTGGGGATTC
TCAGCTATCGGCTGGGTGGTTCGACTTTCAGTATCCATTACCCCCTACGG
GAGGATTGACCGGACACAATACATATGGCCAGGGCTCTGCTACAGCAGAT
ACACCTGAATTCTGGCATACATTCAGCGACATGTTCCCGGAGATATGGTC
AAACGACCTATTAAGCATGGATATGTCCGATGGACTGAACTGGTTTACCC
CGGAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004572KJC3_004572Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004572-T1.utr5p1KJC3_004572-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004572-T1.exon1KJC3_004572-T1.exon1Aspergillus niger KJC3exon
KJC3_004572-T1.exon2KJC3_004572-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004572-T1.cdsKJC3_004572-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004572-T1.utr3p1KJC3_004572-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004572-T1KJC3_004572-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:130094..132547 +
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