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KJC3_004575-T1, KJC3_004575-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004575-T1
Unique NameKJC3_004575-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:136362..139412-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004575-T1 ID=KJC3_004575-T1|Name=KJC3_004575-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3051bp|location=Sequence derived from alignment at ch4:136362..139412- (Aspergillus niger KJC3)
GCCGTCCCCCACTCAATTCTGTCCAATTCCAACCACTTTATTCCCGCGTC
GGCTTTGAGGTGTGCAACGATGCGCCTGTCCATCTCCTGCGACAGCTGTC
GGTAAGCTCCCTCACTTCCATCGCATTCCATCCCATCTCATCCAATTACA
ATCATCAATTGCTCATCTAATAGACAATCCAAGGTCAAGTGCATCCACGA
TGGCCATCCTCCCTGCCGTCGCTGCCACCGCCTCCGTCGCGATAACTGCG
TCCTGACCGATCCGCGCTCTCCCGGTGTGCGCACACCCCGAACCCCTCGC
AGAGCCAGCATTAGAAGAACCGGCTCAGGTTCAGCGTCAGGGATAGGAAC
AGGGACAAGAACAGCAACAGACACAGGAAATACCACCGCGACCACTCCCA
TAGCCAGCTCGCCCGCTCCTTCGCCCACTCCCTCTCATTCTGCCAATCCC
ATCGCTGCCATCGCCCCGGCCACTCTCATCGCAGCATGCGACATCTACCG
CAAGAAATTCCCCGTCGTCAACTTCCTTCATTATCCCTCGCTGATCGCCG
ATCTCTCCCATCATGCCTCCGCCGTCGAACCCGTTTTTCTCTCAGCTCTA
CTCTCTCTATGCGCCCGCTTCATGTCCGACGCCGCCCTGGCTGCTCCTGA
AACCTACGCGGAGTATGCGCGCTCTCAGCTGGCCCATCGCGCCTTCGAAG
CCCCTTCCCTCTATCTTGCACAATCGCTCGTCATGATCTCGCTCTACGAA
TGGGGTTCGGGTCGGCCTTATCGCGCATGGATGTACAGCGGTACTATTCC
ACTCAATTTCCCCCTTCAGTCCGACCATCACTAACCCAATGCGCTAATCT
CAGGCATGGCCACCTACATGATCCAATCCCTCCTCAAGACCGCCGATGAT
ACCATGGAACAACAACCCCTCCTTGACCTGCCCGCCCATCGCATAACCTA
CGAACAGCTGGTCCGCACCTACTGGTGCTGCTTTGCACAGGACTGCGAGC
TCAGCTCCGGTGCCCGCCAACACTTCGCCCTCTCCTTCCGCCAGATCTCC
GTGCCCCTCCCCATCAGCGATTCCGACTTTACCTTTGGGAAAGCCACCCC
ACGCTTAATGCCGGCGGACATGAATCGCTCATCCTCTCTGGCACTGAATT
TATCTATTGATCGGGGTTTGACTATCGTCACACGGGGGTTCGACATATTC
GTTCGCATACTCCGGTTCGCCAATGAGAGCCGTCGGGGTCGGGCGCAAGG
GTCGGCAGGGTTGTCACTCCGCGCGTGGGAGATGCTCAAGGCCGAGCTGG
ACGAGTGGAGGGGGCTTCAGGATGCGACGGTGCGGTATCCCGAGACCAAT
GCGCAGGCGCATGTGGCCTTGGGATCGGGGGAGTTGTTCGCCTATATCAA
CCTGGTGTATTTCATGAGGTGTGTTTATTTAGCCGTCAGACTGCTCGATG
AGGTAATTACTGACCGCGGTAGTATTCTATTCCTCTACCGCGACCGCTTC
CTCTCCACCCCTAAACCATCCATCGACCATCACGACCCTGCCGACGACGA
GGCCATTGACCACCTCTTCGCCACGGCACAGCACATCAGCGCTATACTCG
CAGCCCTTGAAGCCTGCGCCACTCCTGTCATCACTCCATATGCGGGGTTC
AGCGTCTTCGTCGCCGCCCATATCAACATGTACGGGACTGTCTGTCCGGG
CCGGTACCCGGGGGGTCTGGCGCGCGCGCAGGAAGAGAAGAAGATGAATC
TGGAGTATCTGGAGCGACTGTGTCGGTTCTGGGATGTGGGAACCAGCTGG
GTACGCGCACTCACACCCCCACTATAATTCTTGTTGAAGACTAATGGATG
GCAGTGGCGAACTCTCCAAGAAGCAAACCGGTTCTATGAAACAGCCCGAA
CCACCGCCCAAGGTCCAACGGGCGTTTCTCGTCCAGAGCATCTCACCCTG
GCTGGTACCATTGATGAATACGGCGATATTCGCGTGTCGCGACCCGAAAC
AGCGTCTCCCGCGCGACGACGCCCAGGGGTATCTTCTGAGGGAGTAGGAG
TGCGACGGATGTCGGTCGCCGAGTTGACGGCGCCAGGTGGTGGTGGAAGC
AGCGGTGGTAGTGGTGAGTGGGCGGATGTCGAGGCGGAGATGTGGCAGTG
GCCGTTTCTCGATGAGAATTGGTCGTTGGGATTCGACACGGGGTTTGAGT
CGGCGTGGCCGGGATTGAGCTGATGGGAGCTGGGTCGGCTTTGTATGAGT
AATGAATGGATAAGTTAATGGCCACTTGTATAATTAATATTATCGATCGT
AATCAGATATGGTCTGGTTCCATGGCCATTACAGCGCCTGAATAGTAAGT
GATAAGGTTATGTTCGAGATTGTCCTTCCGGTGATAAATTGCTCCTATAT
TCCCTCCATCTAGACATAGGGCTCTGGTAGTTTAACGTCTGAGCGCGGGT
CATACTCGGGGCGGTACAAAATCCAGAGGGGTTGTGCTGAGAATATCGAC
TAGCAATGACACCGACTGGAGAAACCTCCGTTCGATCAAGAGATTGTTGC
ATTCGAGATAGTCCGGCGAGGAGTCAATTGATTTGTACTGGCGCTTTCAC
ACATCCAATGCTCCAAAATGTTCAGTTTGGAACACTTGGGATGCGGTACA
CTGAGCGCAAGCACTGCGACCTCGGGCCGGCATACTAGTAAGTAGTAGAT
AGAGCACAGGCCTCTTGGTGTACCTCAGCCGAGTCAGTATCATGTTTATT
AGTGGTTCGGTCGGCACACGCGGCGTCGGTTGCCCCGTTGTGTTGGCGTA
GTAGTATTTTATCTGTTCTCGGAAGTAGGGTAAGCTGCATAGTGGTACTT
TAGTAGTATATGTCTCAGATGTTGGTGGAAACAAACCACCGACGACACAT
CACTGTAATTAAAGAAAGCACAGCACGGGTCCCAGCAGGTGGTCCCGAAC
TGAAATCCCCGAAAACTGCAGTTCAGTAGAATACTACTGCTAATAATATA
TATTCACTCCCCTGCAGGTTAAGTCCGAGTGGGCGCGTACGTGGCTCAAA
T
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Coding sequence (CDS) from alignment at ch4:136362..139412-

>KJC3_004575-T1 ID=KJC3_004575-T1|Name=KJC3_004575-T1|organism=Aspergillus niger KJC3|type=CDS|length=2286bp|location=Sequence derived from alignment at ch4:136362..139412- (Aspergillus niger KJC3)
GCATGGCCACCTACATGATCCAATCCCTCCTCAAGACCGCCGATGATACC
ATGGAACAACAACCCCTCCTTGACCTGCCCGCCCATCGCATAACCTACGA
ACAGCTGGTCCGCACCTACTGGTGCTGCTTTGCACAGGACTGCGAGCTCA
GCTCCGGTGCCCGCCAACACTTCGCCCTCTCCTTCCGCCAGATCTCCGTG
CCCCTCCCCATCAGCGATTCCGACTTTACCTTTGGGAAAGCCACCCCACG
CTTAATGCCGGCGGACATGAATCGCTCATCCTCTCTGGCACTGAATTTAT
CTATTGATCGGGGTTTGACTATCGTCACACGGGGGTTCGACATATTCGTT
CGCATACTCCGGTTCGCCAATGAGAGCCGTCGGGGTCGGGCGCAAGGGTC
GGCAGGGTTGTCACTCCGCGCGTGGGAGATGCTCAAGGCCGAGCTGGACG
AGTGGAGGGGGCTTCAGGATGCGACGGTGCGGTATCCCGAGACCAATGCG
CAGGCGCATGTGGCCTTGGGATCGGGGGAGTTGTTCGCCTATATCAACCT
GGTGTATTTCATGAGGTGTGTTTATTTAGCCGTCAGACTGCTCGATGAGG
TAATTACTGACCGCGGTAGTATTCTATTCCTCTACCGCGACCGCTTCCTC
TCCACCCCTAAACCATCCATCGACCATCACGACCCTGCCGACGACGAGGC
CATTGACCACCTCTTCGCCACGGCACAGCACATCAGCGCTATACTCGCAG
CCCTTGAAGCCTGCGCCACTCCTGTCATCACTCCATATGCGGGGTTCAGC
GTCTTCGTCGCCGCCCATATCAACATGTACGGGACTGTCTGTCCGGGCCG
GTACCCGGGGGGTCTGGCGCGCGCGCAGGAAGAGAAGAAGATGAATCTGG
AGTATCTGGAGCGACTGTGTCGGTTCTGGGATGTGGGAACCAGCTGGGTA
CGCGCACTCACACCCCCACTATAAATGTCCGACGCCGCCCTGGCTGCTCC
TGAAACCTACGCGGAGTATGCGCGCTCTCAGCTGGCCCATCGCGCCTTCG
AAGCCCCTTCCCTCTATCTTGCACAATCGCTCGTCATGATCTCGCTCTAC
GAATGGGGTTCGGGTCGGCCTTATCGCGCATGGATGTACAGCGGCATGGC
CACCTACATGATCCAATCCCTCCTCAAGACCGCCGATGATACCATGGAAC
AACAACCCCTCCTTGACCTGCCCGCCCATCGCATAACCTACGAACAGCTG
GTCCGCACCTACTGGTGCTGCTTTGCACAGGACTGCGAGCTCAGCTCCGG
TGCCCGCCAACACTTCGCCCTCTCCTTCCGCCAGATCTCCGTGCCCCTCC
CCATCAGCGATTCCGACTTTACCTTTGGGAAAGCCACCCCACGCTTAATG
CCGGCGGACATGAATCGCTCATCCTCTCTGGCACTGAATTTATCTATTGA
TCGGGGTTTGACTATCGTCACACGGGGGTTCGACATATTCGTTCGCATAC
TCCGGTTCGCCAATGAGAGCCGTCGGGGTCGGGCGCAAGGGTCGGCAGGG
TTGTCACTCCGCGCGTGGGAGATGCTCAAGGCCGAGCTGGACGAGTGGAG
GGGGCTTCAGGATGCGACGGTGCGGTATCCCGAGACCAATGCGCAGGCGC
ATGTGGCCTTGGGATCGGGGGAGTTGTTCGCCTATATCAACCTGGTGTAT
TTCATGAGGTGTGTTTATTTAGCCGTCAGACTGCTCGATGAGGTAATTAC
TGACCGCGGTAGTATTCTATTCCTCTACCGCGACCGCTTCCTCTCCACCC
CTAAACCATCCATCGACCATCACGACCCTGCCGACGACGAGGCCATTGAC
CACCTCTTCGCCACGGCACAGCACATCAGCGCTATACTCGCAGCCCTTGA
AGCCTGCGCCACTCCTGTCATCACTCCATATGCGGGGTTCAGCGTCTTCG
TCGCCGCCCATATCAACATGTACGGGACTGTCTGTCCGGGCCGGTACCCG
GGGGGTCTGGCGCGCGCGCAGGAAGAGAAGAAGATGAATCTGGAGTATCT
GGAGCGACTGTGTCGGTTCTGGGATGTGGGAACCAGCTGGGTACGCGCAC
TCACACCCCCACTATAAATGTCCGACGCCGCCCTGGCTGCTCCTGAAACC
TACGCGGAGTATGCGCGCTCTCAGCTGGCCCATCGCGCCTTCGAAGCCCC
TTCCCTCTATCTTGCACAATCGCTCGTCATGATCTCGCTCTACGAATGGG
GTTCGGGTCGGCCTTATCGCGCATGGATGTACAGCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004575KJC3_004575Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004575-T1KJC3_004575-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004575-T1.cdsKJC3_004575-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004575-T1.utr3p1KJC3_004575-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004575-T1.exon2KJC3_004575-T1.exon2Aspergillus niger KJC3exon
KJC3_004575-T1.exon1KJC3_004575-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004575-T1.utr5p1KJC3_004575-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007219
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:136362..139412 -
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