You are here

Home

KJC3_004594-T1, KJC3_004594-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004594-T1
Unique NameKJC3_004594-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:180353..182263-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004594-T1 ID=KJC3_004594-T1|Name=KJC3_004594-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1911bp|location=Sequence derived from alignment at ch4:180353..182263- (Aspergillus niger KJC3)
CCCCTTCTTCGGCCTTCTTTCCGAGTCGTGGGGACAACTTTCGGAGACAT
TGGGGGAATTTTCCTGCGGATGCTGAATAATTTTGGGTGGATCCACGATG
ATGATTTGCCGAATGTCGCCCATCAGTGGAGCAGAACCTTCTGTTTAAAG
CCAGTTGGAGGCTGAAGAAACCCCCGCGAAGCTTGCCATGAGCCACAGTT
GGAGACCCAGAATAAAAGTCAGACCATCAAGTCGGAGACTTCGCCCAATG
CGGCAAAGATGCAGATTCTTGTCCATGCCACCTTGACTGTTACTCAGGTA
TACAACTCCACTTTGGATTTCAAATCAGTTTCCACTCGGTTCTACTATCC
CGATGGATCGTATAAAAGCGGTTGTCTGCTCAATTGAGCCGATCAACTGT
CCCATCCTTGGATATATACCCTACTAGCCATTATATACCACCTATACCTA
ATTCTCACGACATCATGACTGTCACCGATCTCGTCAACCACCCTGCCCAG
GGCATCTCCTACTTCACTCCCGCCCAGAACATCCCCGCCGGTACCGCCGC
CAACCCGCAATCCAGCGGCAAGCCGGTCCCGAAGCTCTTCCACCCGCTCA
CCGTCCGCGGCGTCACCTTCCAGAACCGCCTTGGTGTATGTTCTTCACCA
TTCCTCATAATCATCTGAATTTTTAGAACATCTACTGACAATTGGTACCC
AGCTCGCTCCTCTCTGCCAATACTCCGCCCAAGATGGCCACATGACCCCC
TACCACATCGCCCACCTGGGCGGGATCGCCCAGCGCGGTCCCGGTCTCAT
GATGATCGAAGCCACCGCCGTGCAGGCCGAAGGCCGCATCACCCCCCAGG
ACGTCGGTCTGTGGAAGGACTCGCAGATCGGCCCTATGCGCCAAGTTGTC
GAATTCGCCCACTCTCAGAACCAGAAGATTGGTGTCCAGCTCGCCCACGC
CGGTCGCAAGGCCAGCACCGTCGCCCCCTGGATCTCCGCCACCGCCATGG
CCACTGAGGAGCTCGGCGGCTGGCCCGACCGGGTCATCGGCCCCAGCGAC
ATCCCCTTCGCCGATACTTTCCCCAAGCCGAAGGCTATGACCAAGGACGA
CATTGTTCAGTTCAAGAATGACTGGGCTGCTGCTGTGAAGCGTGCCCTCG
AGGTCGGCGTCGACTTTATTGAAATCCACGGTGCTCACGGTTACCTCATC
TCGTCTTTCTTGTCGCCCGCTGCCAACAACCGCACCGACGAGTACGGTGG
TTCCTTCGAGAACCGTATCCGTCTGCCTCTCGAGATCGCCCAGATCACTC
GCGACATCGTCGGCCCCAACGTGCCTGTCTTCCTCCGTGTCTCCGCTTCC
GACTGGCTCGAGGAGACCCTCCCCGAGCAGAGCTGGGGTACCGAGGACAC
CGTCAAGTTCGCCAAGGCGCTGGCCGACCAGGGCGCGATCGACCTGATCG
ATATCAGCACCGGTGGTGTTCACGCCGCCCAGAAGGTCAAGTCCGGCCCG
CTCTTCCAGGCTCCCTTCGCCGTGGCTGTGAAGCAGGCGGTCGGCGATAA
GCTCCTGGTATCGGCTGTCGGTGCTATCACCAATGGCCGCCAGGCTAATG
ACCTCCTTGAGAAGGAGGGTCTGGATGTCGCCCTGGTGGGTCGTGGGTTC
CAGAAGGACCCCGGTTTGACCTGGACTTTCGCCCAGCACCTCGACACTGA
GATCTCCATGGCTAGCCAGATCCGCTGGGGATTCACTCGTCGCGGTGGTC
GCGAGTACATTGATCCTAGCGTTTACAAGCCTTCGATTTTTGATGCTTAG
ACGATGCCGATATATAGCAGACCGCTACTTTTAATAGACTGTACATAGAA
TAGACATGACATGCATCCGATTCAACCATCTACCCTGGTCTCTGTACTTT
CAAATATTCTC
back to top

Coding sequence (CDS) from alignment at ch4:180353..182263-

>KJC3_004594-T1 ID=KJC3_004594-T1|Name=KJC3_004594-T1|organism=Aspergillus niger KJC3|type=CDS|length=2538bp|location=Sequence derived from alignment at ch4:180353..182263- (Aspergillus niger KJC3)
CTCGCTCCTCTCTGCCAATACTCCGCCCAAGATGGCCACATGACCCCCTA
CCACATCGCCCACCTGGGCGGGATCGCCCAGCGCGGTCCCGGTCTCATGA
TGATCGAAGCCACCGCCGTGCAGGCCGAAGGCCGCATCACCCCCCAGGAC
GTCGGTCTGTGGAAGGACTCGCAGATCGGCCCTATGCGCCAAGTTGTCGA
ATTCGCCCACTCTCAGAACCAGAAGATTGGTGTCCAGCTCGCCCACGCCG
GTCGCAAGGCCAGCACCGTCGCCCCCTGGATCTCCGCCACCGCCATGGCC
ACTGAGGAGCTCGGCGGCTGGCCCGACCGGGTCATCGGCCCCAGCGACAT
CCCCTTCGCCGATACTTTCCCCAAGCCGAAGGCTATGACCAAGGACGACA
TTGTTCAGTTCAAGAATGACTGGGCTGCTGCTGTGAAGCGTGCCCTCGAG
GTCGGCGTCGACTTTATTGAAATCCACGGTGCTCACGGTTACCTCATCTC
GTCTTTCTTGTCGCCCGCTGCCAACAACCGCACCGACGAGTACGGTGGTT
CCTTCGAGAACCGTATCCGTCTGCCTCTCGAGATCGCCCAGATCACTCGC
GACATCGTCGGCCCCAACGTGCCTGTCTTCCTCCGTGTCTCCGCTTCCGA
CTGGCTCGAGGAGACCCTCCCCGAGCAGAGCTGGGGTACCGAGGACACCG
TCAAGTTCGCCAAGGCGCTGGCCGACCAGGGCGCGATCGACCTGATCGAT
ATCAGCACCGGTGGTGTTCACGCCGCCCAGAAGGTCAAGTCCGGCCCGCT
CTTCCAGGCTCCCTTCGCCGTGGCTGTGAAGCAGGCGGTCGGCGATAAGC
TCCTGGTATCGGCTGTCGGTGCTATCACCAATGGCCGCCAGGCTAATGAC
CTCCTTGAGAAGGAGGGTCTGGATGTCGCCCTGGTGGGTCGTGGGTTCCA
GAAGGACCCCGGTTTGACCTGGACTTTCGCCCAGCACCTCGACACTGAGA
TCTCCATGGCTAGCCAGATCCGCTGGGGATTCACTCGTCGCGGTGGTCGC
GAGTACATTGATCCTAGCGTTTACAAGCCTTCGATTTTTGATGCTTAGAT
GACTGTCACCGATCTCGTCAACCACCCTGCCCAGGGCATCTCCTACTTCA
CTCCCGCCCAGAACATCCCCGCCGGTACCGCCGCCAACCCGCAATCCAGC
GGCAAGCCGGTCCCGAAGCTCTTCCACCCGCTCACCGTCCGCGGCGTCAC
CTTCCAGAACCGCCTTGGTCTCGCTCCTCTCTGCCAATACTCCGCCCAAG
ATGGCCACATGACCCCCTACCACATCGCCCACCTGGGCGGGATCGCCCAG
CGCGGTCCCGGTCTCATGATGATCGAAGCCACCGCCGTGCAGGCCGAAGG
CCGCATCACCCCCCAGGACGTCGGTCTGTGGAAGGACTCGCAGATCGGCC
CTATGCGCCAAGTTGTCGAATTCGCCCACTCTCAGAACCAGAAGATTGGT
GTCCAGCTCGCCCACGCCGGTCGCAAGGCCAGCACCGTCGCCCCCTGGAT
CTCCGCCACCGCCATGGCCACTGAGGAGCTCGGCGGCTGGCCCGACCGGG
TCATCGGCCCCAGCGACATCCCCTTCGCCGATACTTTCCCCAAGCCGAAG
GCTATGACCAAGGACGACATTGTTCAGTTCAAGAATGACTGGGCTGCTGC
TGTGAAGCGTGCCCTCGAGGTCGGCGTCGACTTTATTGAAATCCACGGTG
CTCACGGTTACCTCATCTCGTCTTTCTTGTCGCCCGCTGCCAACAACCGC
ACCGACGAGTACGGTGGTTCCTTCGAGAACCGTATCCGTCTGCCTCTCGA
GATCGCCCAGATCACTCGCGACATCGTCGGCCCCAACGTGCCTGTCTTCC
TCCGTGTCTCCGCTTCCGACTGGCTCGAGGAGACCCTCCCCGAGCAGAGC
TGGGGTACCGAGGACACCGTCAAGTTCGCCAAGGCGCTGGCCGACCAGGG
CGCGATCGACCTGATCGATATCAGCACCGGTGGTGTTCACGCCGCCCAGA
AGGTCAAGTCCGGCCCGCTCTTCCAGGCTCCCTTCGCCGTGGCTGTGAAG
CAGGCGGTCGGCGATAAGCTCCTGGTATCGGCTGTCGGTGCTATCACCAA
TGGCCGCCAGGCTAATGACCTCCTTGAGAAGGAGGGTCTGGATGTCGCCC
TGGTGGGTCGTGGGTTCCAGAAGGACCCCGGTTTGACCTGGACTTTCGCC
CAGCACCTCGACACTGAGATCTCCATGGCTAGCCAGATCCGCTGGGGATT
CACTCGTCGCGGTGGTCGCGAGTACATTGATCCTAGCGTTTACAAGCCTT
CGATTTTTGATGCTTAGATGACTGTCACCGATCTCGTCAACCACCCTGCC
CAGGGCATCTCCTACTTCACTCCCGCCCAGAACATCCCCGCCGGTACCGC
CGCCAACCCGCAATCCAGCGGCAAGCCGGTCCCGAAGCTCTTCCACCCGC
TCACCGTCCGCGGCGTCACCTTCCAGAACCGCCTTGGT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0010181FMN binding
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004594KJC3_004594Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004594-T1KJC3_004594-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004594-T1.cdsKJC3_004594-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004594-T1.utr3p1KJC3_004594-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004594-T1.exon2KJC3_004594-T1.exon2Aspergillus niger KJC3exon
KJC3_004594-T1.exon1KJC3_004594-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004594-T1.utr5p1KJC3_004594-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR001155
DBxrefPFAM:PF00724
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:180353..182263 -
Powered by Drupal