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KJC3_004595-T1, KJC3_004595-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004595-T1
Unique NameKJC3_004595-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:183674..185562+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004595-T1 ID=KJC3_004595-T1|Name=KJC3_004595-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1889bp|location=Sequence derived from alignment at ch4:183674..185562+ (Aspergillus niger KJC3)
AGACTTGGTCCATTTACCCTCCCGTACCAGCTGTTTGGTTGAGAACATCA
CCACCATTAACCTTTCCAACCGGCGAGGCCCTTTTCCTACTTCCGACCGA
CTCCTTATCAAGACAAATGGGACTGCTATATCGGTCTCGCTCGGGAGCCA
ACTATGTCAGATACCCATTCCTCAGCGGGCGCTTCACTGCCCGATGTTTC
CCATCCACGAAACCCCAAAAGACGACGGGCGCGCCACAACAAATCCCGCA
AGGGTTGTTACACTTGCAAGCTACGCCGGGTCAAGGTTTGTCTAATTGCC
ATGCAGAGACTTCTAGCTCCGATGTTGACCGAACTCAGTGTGATGAAGTA
AGGCCGGTTTGTGGCGCCTGTTCTTTTCGCGATGAACCATGTTCCTTTCC
GCCACCAGATGAGCAGGTAGTGTATGTGGCTAAAGCTCGATGGTCATGGC
ATTCTCAGCCAGTTGGCTTTTTTTTCTCAGTTTCATAACCTGACCTACAA
GACAGCAGACATACAAATCCAGTGCCTTCTCATCACTCAATGAACGGCAA
TATAGGGCAGTCACTACGGCCGTTAGACCTACACATACCGCTGGTGTCTG
AATCGGCAGAAACTTCACAACGCAACGAAGTTATTAACATGCCAGACATG
AGTCTCTTGACACATTTCATGGTCCATGTCTCGGGGAGAATGGCTCTCCA
TCCGGAGCGTAAATTGATCTGGCAGCGAGTCATACCAACCATGGCTGCTG
AGCAAGAGTATTTGATGCATCTTCTGCTGGCGCTGGCCGGCACGCATGCG
CTATGCGAGGCAGACTCACCCGACACCAATTTATTGAACTCCAAATTTGA
CCAGACTATCCCCGAAGCAGAATGCTTTCGTGACTACCACCGCATCCTCG
ATCATCACCAGAAAGGCCTTGAAGGTTTCCGACACGCATTATCAGAGGCG
ACAGCTAGTACAGCCGAATACATATTCTGTGGCTCCATCCTAATAGTGGC
TTTTTCTTTTGCTTCCTTGCGCATTCGCGCTTTAGGTGATAAGGGAATAG
GCTTCCACAATGGTGACTCAGCCGGAGAACCCTGGATTGACTGGCTGCAT
CTAGTTCGCGGTTTGGGCGCTTTGGTAGGAGAGCACTTTATAGCTCTCCG
GACCAGCAGGTTACGGACCTTAATGGATTACCCTCAAGCTAATGAGCACT
GGAAGGACTTTCTAGCGATAACGCCCACACGGGTATTCCCACGTCTACGA
CACGCGTCCCCGCAATTTGTTCGCTTCTCCCAAGGAGCTGCTCAGCAGAT
TTCCTTGTTGCGCGGCTTTGCGAACACCCTTACCCAGGACTTTGGGATAA
ACATGGAAGAAACCCCAAGCCCAGATTCTTATGGATCTCCCAATATACAA
ACGATTCCAGATTTTCTACGCGAACAAATCAGCACGCTCGATTGTCTTGA
GCAAATGTACATGCGAACTCTCTACGTCTTTCACTTTTCAGCCAGTGAGC
GCGATAGCTCCGCCTCCATGGATATTCAGACCGACCTAGAAGATGCAGCT
GTCCTGTCGTGGCCGAATTTCATCTCAAACGCATTTGTCTTGTCGCTACA
GCAAGGACAGGATGCAGGGATCTTCGGAGGATTTTCATACGTGATCCTGG
CACATTTCTATGTCATTCTGCTGCTATTTGAGGATTTGTGGTATATACGG
GGGTCATTTCCAAGGGAGATCCGGAACATTCATCGGCTGGTCGAGACGCT
CGGAGATGGGGCGTTGAGGTCTCTCATGGAGTGGCCGATGGCAATGCAGG
GGGAGTAATTTCATACCAATATACCGCTTCAATGGACAATTGAATATAAT
CAATAATACCAGACTATCTATATAGCACAATAATACGCC
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Coding sequence (CDS) from alignment at ch4:183674..185562+

>KJC3_004595-T1 ID=KJC3_004595-T1|Name=KJC3_004595-T1|organism=Aspergillus niger KJC3|type=CDS|length=4554bp|location=Sequence derived from alignment at ch4:183674..185562+ (Aspergillus niger KJC3)
ATGTCAGATACCCATTCCTCAGCGGGCGCTTCACTGCCCGATGTTTCCCA
TCCACGAAACCCCAAAAGACGACGGGCGCGCCACAACAAATCCCGCAAGG
GTTGTTACACTTGCAAGCTACGCCGGGTCAAGTGTGATGAAGTAAGGCCG
GTTTGTGGCGCCTGTTCTTTTCGCGATGAACCATGTTCCTTTCCGCCACC
AGATGAGCAGGTAGTCAGACATACAAATCCAGTGCCTTCTCATCACTCAA
TGAACGGCAATATAGGGCAGTCACTACGGCCGTTAGACCTACACATACCG
CTGGTGTCTGAATCGGCAGAAACTTCACAACGCAACGAAGTTATTAACAT
GCCAGACATGAGTCTCTTGACACATTTCATGGTCCATGTCTCGGGGAGAA
TGGCTCTCCATCCGGAGCGTAAATTGATCTGGCAGCGAGTCATACCAACC
ATGGCTGCTGAGCAAGAGTATTTGATGCATCTTCTGCTGGCGCTGGCCGG
CACGCATGCGCTATGCGAGGCAGACTCACCCGACACCAATTTATTGAACT
CCAAATTTGACCAGACTATCCCCGAAGCAGAATGCTTTCGTGACTACCAC
CGCATCCTCGATCATCACCAGAAAGGCCTTGAAGGTTTCCGACACGCATT
ATCAGAGGCGACAGCTAGTACAGCCGAATACATATTCTGTGGCTCCATCC
TAATAGTGGCTTTTTCTTTTGCTTCCTTGCGCATTCGCGCTTTAGGTGAT
AAGGGAATAGGCTTCCACAATGGTGACTCAGCCGGAGAACCCTGGATTGA
CTGGCTGCATCTAGTTCGCGGTTTGGGCGCTTTGGTAGGAGAGCACTTTA
TAGCTCTCCGGACCAGCAGGTTACGGACCTTAATGGATTACCCTCAAGCT
AATGAGCACTGGAAGGACTTTCTAGCGATAACGCCCACACGGGTATTCCC
ACGTCTACGACACGCGTCCCCGCAATTTGTTCGCTTCTCCCAAGGAGCTG
CTCAGCAGATTTCCTTGTTGCGCGGCTTTGCGAACACCCTTACCCAGGAC
TTTGGGATAAACATGGAAGAAACCCCAAGCCCAGATTCTTATGGATCTCC
CAATATACAAACGATTCCAGATTTTCTACGCGAACAAATCAGCACGCTCG
ATTGTCTTGAGCAAATGTACATGCGAACTCTCTACGTCTTTCACTTTTCA
GCCAGTGAGCGCGATAGCTCCGCCTCCATGGATATTCAGACCGACCTAGA
AGATGCAGCTGTCCTGTCGTGGCCGAATTTCATCTCAAACGCATTTGTCT
TGTCGCTACAGCAAGGACAGGATGCAGGGATCTTCGGAGGATTTTCATAC
GTGATCCTGGCACATTTCTATGTCATTCTGCTGCTATTTGAGGATTTGTG
GTATATACGGGGGTCATTTCCAAGGGAGATCCGGAACATTCATCGGCTGG
TCGAGACGCTCGGAGATGGGGCGTTGAGGTCTCTCATGGAGTGGCCGATG
GCAATGCAGGGGGAGTAAATGTCAGATACCCATTCCTCAGCGGGCGCTTC
ACTGCCCGATGTTTCCCATCCACGAAACCCCAAAAGACGACGGGCGCGCC
ACAACAAATCCCGCAAGGGTTGTTACACTTGCAAGCTACGCCGGGTCAAG
TGTGATGAAGTAAGGCCGGTTTGTGGCGCCTGTTCTTTTCGCGATGAACC
ATGTTCCTTTCCGCCACCAGATGAGCAGGTAGTCAGACATACAAATCCAG
TGCCTTCTCATCACTCAATGAACGGCAATATAGGGCAGTCACTACGGCCG
TTAGACCTACACATACCGCTGGTGTCTGAATCGGCAGAAACTTCACAACG
CAACGAAGTTATTAACATGCCAGACATGAGTCTCTTGACACATTTCATGG
TCCATGTCTCGGGGAGAATGGCTCTCCATCCGGAGCGTAAATTGATCTGG
CAGCGAGTCATACCAACCATGGCTGCTGAGCAAGAGTATTTGATGCATCT
TCTGCTGGCGCTGGCCGGCACGCATGCGCTATGCGAGGCAGACTCACCCG
ACACCAATTTATTGAACTCCAAATTTGACCAGACTATCCCCGAAGCAGAA
TGCTTTCGTGACTACCACCGCATCCTCGATCATCACCAGAAAGGCCTTGA
AGGTTTCCGACACGCATTATCAGAGGCGACAGCTAGTACAGCCGAATACA
TATTCTGTGGCTCCATCCTAATAGTGGCTTTTTCTTTTGCTTCCTTGCGC
ATTCGCGCTTTAGGTGATAAGGGAATAGGCTTCCACAATGGTGACTCAGC
CGGAGAACCCTGGATTGACTGGCTGCATCTAGTTCGCGGTTTGGGCGCTT
TGGTAGGAGAGCACTTTATAGCTCTCCGGACCAGCAGGTTACGGACCTTA
ATGGATTACCCTCAAGCTAATGAGCACTGGAAGGACTTTCTAGCGATAAC
GCCCACACGGGTATTCCCACGTCTACGACACGCGTCCCCGCAATTTGTTC
GCTTCTCCCAAGGAGCTGCTCAGCAGATTTCCTTGTTGCGCGGCTTTGCG
AACACCCTTACCCAGGACTTTGGGATAAACATGGAAGAAACCCCAAGCCC
AGATTCTTATGGATCTCCCAATATACAAACGATTCCAGATTTTCTACGCG
AACAAATCAGCACGCTCGATTGTCTTGAGCAAATGTACATGCGAACTCTC
TACGTCTTTCACTTTTCAGCCAGTGAGCGCGATAGCTCCGCCTCCATGGA
TATTCAGACCGACCTAGAAGATGCAGCTGTCCTGTCGTGGCCGAATTTCA
TCTCAAACGCATTTGTCTTGTCGCTACAGCAAGGACAGGATGCAGGGATC
TTCGGAGGATTTTCATACGTGATCCTGGCACATTTCTATGTCATTCTGCT
GCTATTTGAGGATTTGTGGTATATACGGGGGTCATTTCCAAGGGAGATCC
GGAACATTCATCGGCTGGTCGAGACGCTCGGAGATGGGGCGTTGAGGTCT
CTCATGGAGTGGCCGATGGCAATGCAGGGGGAGTAAATGTCAGATACCCA
TTCCTCAGCGGGCGCTTCACTGCCCGATGTTTCCCATCCACGAAACCCCA
AAAGACGACGGGCGCGCCACAACAAATCCCGCAAGGGTTGTTACACTTGC
AAGCTACGCCGGGTCAAGTGTGATGAAGTAAGGCCGGTTTGTGGCGCCTG
TTCTTTTCGCGATGAACCATGTTCCTTTCCGCCACCAGATGAGCAGGTAG
TCAGACATACAAATCCAGTGCCTTCTCATCACTCAATGAACGGCAATATA
GGGCAGTCACTACGGCCGTTAGACCTACACATACCGCTGGTGTCTGAATC
GGCAGAAACTTCACAACGCAACGAAGTTATTAACATGCCAGACATGAGTC
TCTTGACACATTTCATGGTCCATGTCTCGGGGAGAATGGCTCTCCATCCG
GAGCGTAAATTGATCTGGCAGCGAGTCATACCAACCATGGCTGCTGAGCA
AGAGTATTTGATGCATCTTCTGCTGGCGCTGGCCGGCACGCATGCGCTAT
GCGAGGCAGACTCACCCGACACCAATTTATTGAACTCCAAATTTGACCAG
ACTATCCCCGAAGCAGAATGCTTTCGTGACTACCACCGCATCCTCGATCA
TCACCAGAAAGGCCTTGAAGGTTTCCGACACGCATTATCAGAGGCGACAG
CTAGTACAGCCGAATACATATTCTGTGGCTCCATCCTAATAGTGGCTTTT
TCTTTTGCTTCCTTGCGCATTCGCGCTTTAGGTGATAAGGGAATAGGCTT
CCACAATGGTGACTCAGCCGGAGAACCCTGGATTGACTGGCTGCATCTAG
TTCGCGGTTTGGGCGCTTTGGTAGGAGAGCACTTTATAGCTCTCCGGACC
AGCAGGTTACGGACCTTAATGGATTACCCTCAAGCTAATGAGCACTGGAA
GGACTTTCTAGCGATAACGCCCACACGGGTATTCCCACGTCTACGACACG
CGTCCCCGCAATTTGTTCGCTTCTCCCAAGGAGCTGCTCAGCAGATTTCC
TTGTTGCGCGGCTTTGCGAACACCCTTACCCAGGACTTTGGGATAAACAT
GGAAGAAACCCCAAGCCCAGATTCTTATGGATCTCCCAATATACAAACGA
TTCCAGATTTTCTACGCGAACAAATCAGCACGCTCGATTGTCTTGAGCAA
ATGTACATGCGAACTCTCTACGTCTTTCACTTTTCAGCCAGTGAGCGCGA
TAGCTCCGCCTCCATGGATATTCAGACCGACCTAGAAGATGCAGCTGTCC
TGTCGTGGCCGAATTTCATCTCAAACGCATTTGTCTTGTCGCTACAGCAA
GGACAGGATGCAGGGATCTTCGGAGGATTTTCATACGTGATCCTGGCACA
TTTCTATGTCATTCTGCTGCTATTTGAGGATTTGTGGTATATACGGGGGT
CATTTCCAAGGGAGATCCGGAACATTCATCGGCTGGTCGAGACGCTCGGA
GATGGGGCGTTGAGGTCTCTCATGGAGTGGCCGATGGCAATGCAGGGGGA
GTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004595KJC3_004595Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004595-T1KJC3_004595-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004595-T1.utr5p1KJC3_004595-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004595-T1.exon1KJC3_004595-T1.exon1Aspergillus niger KJC3exon
KJC3_004595-T1.exon2KJC3_004595-T1.exon2Aspergillus niger KJC3exon
KJC3_004595-T1.exon3KJC3_004595-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004595-T1.cdsKJC3_004595-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004595-T1.utr3p1KJC3_004595-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:183674..185562 +
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