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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:191115..192248- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004598-T1 ID=KJC3_004598-T1|Name=KJC3_004598-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1134bp|location=Sequence derived from alignment at ch4:191115..192248- (Aspergillus niger KJC3)
ACATATTAGAGTTAGTGTTCCTGGCATACCGTGAACTCACTCCCAATCCC
ACAGCTAGTGCCCATAGACCTACCCCATGTCTCCCAGTCAATGAACAACT
ATCTATCCGCCTCACATCCAACAACCACAATGTTAATACCGAACACCAAA
TCACGTACACAACTTCCGACATCAAACACCTCACACCCACCCTCACAACC
ATACAAAAACAACCTCCCCCTCCCCGCCGTCCACAGCTCACCCACCCAGA
CCCTCACACGCCAATGCACCGGATATCTAACCGAACAAATCCGCGAAGAC
CTAACTCTCGAATCGCAACTCCTCCTCCTCTCCTTCGCCATTGGCATCCA
AGATGCCGCCGCGTGGAAAGACTACGGCTGCTTCGCCTCCAACCAAACAG
GCAACATGCTCTTCCTGGCTATCGGCGGTGCCGGACTTGCCAGCAACGAC
GATTTTGATTTCACCTACGTGGGGATGAGTCTGGGGTCTTTTGTGGCCGG
TGGGCTGGTAATGGGCCAATTCGCTAATTATCTGGGCGTGGTACGCATGC
GCTGGTGGTTACTTTTCTCGAGTCTGTTGCAGACGGTGATGGTATTTGCC
GCAGCGGCGATTATGGCGTATACAAACCCGGTGAAGCAGCAGACTACTAA
TGATCCACCGGCGCTGGTGACGTTGTTTTTATTGGCGTTTTCATCCGGTG
CACAGGTTTCTATGGGGAGAGCGTTGAAGGTTACGGATATTACGACGGCT
ATGGCGACGGCGGCGTATATTGATGTGGTTATTGATCCTGGTTTGTTTCG
GGCAAGGAATCGGATGCGGAATCGTAGGGTTTTATTTTTGGTTATGTTGA
CGGCGGGGTGTTTTGCTGGTGCGGGCGTGGAGAAGTCGGCTGGGTCGTGT
GCTACGTTGATTATGTGTGGGTGTTTGAAGGTTCTGGTTACTGTGTTATT
CTTTTTTACGCCAAGAATGAAGGTGGGGGTCTGAGGTTTTGTGGATAGAG
ATTGTGTTAAAGGTATTTCTTGGGCGTTGATAAAATATATTATAAAGATC
ACAGAAAGAAGGAGTATTCTGGAAAGGTGAGCCAAAGCCATTGCAGCCAT
AGAATATGATCAGTCTGCTTCCATGAGATGCTGG back to topCoding sequence (CDS) from alignment at ch4:191115..192248- >KJC3_004598-T1 ID=KJC3_004598-T1|Name=KJC3_004598-T1|organism=Aspergillus niger KJC3|type=CDS|length=894bp|location=Sequence derived from alignment at ch4:191115..192248- (Aspergillus niger KJC3)
ATGAACAACTATCTATCCGCCTCACATCCAACAACCACAATGTTAATACC
GAACACCAAATCACGTACACAACTTCCGACATCAAACACCTCACACCCAC
CCTCACAACCATACAAAAACAACCTCCCCCTCCCCGCCGTCCACAGCTCA
CCCACCCAGACCCTCACACGCCAATGCACCGGATATCTAACCGAACAAAT
CCGCGAAGACCTAACTCTCGAATCGCAACTCCTCCTCCTCTCCTTCGCCA
TTGGCATCCAAGATGCCGCCGCGTGGAAAGACTACGGCTGCTTCGCCTCC
AACCAAACAGGCAACATGCTCTTCCTGGCTATCGGCGGTGCCGGACTTGC
CAGCAACGACGATTTTGATTTCACCTACGTGGGGATGAGTCTGGGGTCTT
TTGTGGCCGGTGGGCTGGTAATGGGCCAATTCGCTAATTATCTGGGCGTG
GTACGCATGCGCTGGTGGTTACTTTTCTCGAGTCTGTTGCAGACGGTGAT
GGTATTTGCCGCAGCGGCGATTATGGCGTATACAAACCCGGTGAAGCAGC
AGACTACTAATGATCCACCGGCGCTGGTGACGTTGTTTTTATTGGCGTTT
TCATCCGGTGCACAGGTTTCTATGGGGAGAGCGTTGAAGGTTACGGATAT
TACGACGGCTATGGCGACGGCGGCGTATATTGATGTGGTTATTGATCCTG
GTTTGTTTCGGGCAAGGAATCGGATGCGGAATCGTAGGGTTTTATTTTTG
GTTATGTTGACGGCGGGGTGTTTTGCTGGTGCGGGCGTGGAGAAGTCGGC
TGGGTCGTGTGCTACGTTGATTATGTGTGGGTGTTTGAAGGTTCTGGTTA
CTGTGTTATTCTTTTTTACGCCAAGAATGAAGGTGGGGGTCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004598-T1.utr3p1 | KJC3_004598-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004598-T1.utr5p1 | KJC3_004598-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.4 |
| DBxref | InterPro:IPR010699 |
| DBxref | PFAM:PF06912 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:191115..192248 - |
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