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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:258767..260518- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004628-T1 ID=KJC3_004628-T1|Name=KJC3_004628-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1752bp|location=Sequence derived from alignment at ch4:258767..260518- (Aspergillus niger KJC3)
ATGGAGGCTGTTCCCGAATCTCAGGATTACCAACCGACAGCTGAAACTCC
CCTGCTACAACGAACATCCCGATGCGATGATGAAGAGCCAACGACGACAC
CTCACCCGCACTTGACCCGTGTGGTGGTGATTATCATTATCTGCATCTTC
CTGCTCGAATTGGGAGACTACATGATGCGGGCACCATCCATCCGGGTTCT
GGAAGACATCACCTGTCGGAAGTTTTACGGATCCACCACTCCATTCAACT
CCCATGTCCCTCGACCTATCCCCGAACATGAATGCAAGGTCGCTCCCGTA
CAAGCGGAGATAGCGATGATAAAGGGTTGGGACAATGCTCTCTCTTGTAT
ACCTGCTATCTTTCTTGCTATACCGTATGGGTATGTGGGAGATCGGTATG
GGAGAAAGATAATGCTTGTTTTGGCCGTGCTTGGTATACTACTGTCACAG
ATTTGGGTGCAATTCGTTCGTAAGTTTATAAAATCTCCCAAGGAAGACCA
GTGACACTAACTTGTATACCCACAGTTTATTTCAACGACACTTTCGACGT
TCGGTGGATCTGGGCCGGGAATTTGTTTCTTCTGATCGGAGGCGGGAGTG
CTGTTTCCCAGAACTCTATTTATGCCATCGTCGCGGATGTTGCACCGGAG
GCCAAAAGGTGCGACCCTTCATATTATTACATTACGCCATTTTTAACCGC
TCAGGAACGGACTCTTATTCTTATATTTAAATCAGGGGCCCCATTTTCTT
CCAAGTCTCTGCTGCTGCACTCATATCCACAGTAGTCGGCATTCCATTAT
CCTGGTTGCTGATGAAAATCGACCCATTTAACGCACTACTAGCCGCTTCC
GGCTTTATAGCTCTTGGGAATATGCTGGTTCTCTTCCTCCCTGAAACTCT
TCAGCAAGCAAAGAAGGTTGATGCTGCTTTGAATCACCTCGCCCAAGATT
CGCACACCGATCAAGCAATCTCACCTACGCGAGCTAAATCGTCAAATATC
GATTTATGGCTCTTGATTGTCAAAGCTGTCCACGATTCTCGCTTCATATT
GGCAAACCCTGGTCTTTGTGCTCTTATATTCACATTTATTCTGTCCAGCT
TGTCGAACAACAGTGTTTCGATTCTTTTTCAACTTGCCTCACTGAGGTTT
CACTGGTCACTGGCAGATGTACGTTTTCAAGGAGACCTTCTCTTCTTTAC
ACAGAACCTAACAGTTTTTCTCCCGTAGGCTAGTTTCCTCCTTCCCTTCA
GCTCAGTCACCAACTTTGTAATCCTCATCGGTATTCTGCCAGTGATCTAT
TCGGTCCTAGGTTCGCGCTTCGGCCTCCGCCCCTCGAGCAAAGATCTTGT
CGTCGCGCGTGGTTCTCTCGTGTTCCACATCCTCGGTGCTCTCGCTATTG
CTTTCCCTGCCGGTCCCTTGCTCCTTATCTTCGGTACCTTTATCTTTGCT
TGCGGTGACGGCCATGTTTCCGCCTCACGCTCTCTCCTCACATCATTCGT
TCATCCGGATCAAGTCTCCCGTCTGTATGCTGTGCTGGCTATCATGATGA
CGATCGGAAGTATGGTTATGGCACCCTTGCTGTCAAAGGCCTTTTCATGG
GGATTGGATCTTGGAGAGGACAGGAGCGGAATCGTATTTCTGACTGTTGC
TGCTTTGTACCTAGTGTTTGGATTGCCATTGTGGATCATTAAGTTGCCGA
GTCAAGATGAGGGTATTCATGGCTAATTGGAAGTGGAGAAAGGAATTTTT
GG back to topCoding sequence (CDS) from alignment at ch4:258767..260518- >KJC3_004628-T1 ID=KJC3_004628-T1|Name=KJC3_004628-T1|organism=Aspergillus niger KJC3|type=CDS|length=6132bp|location=Sequence derived from alignment at ch4:258767..260518- (Aspergillus niger KJC3)
GCTAGTTTCCTCCTTCCCTTCAGCTCAGTCACCAACTTTGTAATCCTCAT
CGGTATTCTGCCAGTGATCTATTCGGTCCTAGGTTCGCGCTTCGGCCTCC
GCCCCTCGAGCAAAGATCTTGTCGTCGCGCGTGGTTCTCTCGTGTTCCAC
ATCCTCGGTGCTCTCGCTATTGCTTTCCCTGCCGGTCCCTTGCTCCTTAT
CTTCGGTACCTTTATCTTTGCTTGCGGTGACGGCCATGTTTCCGCCTCAC
GCTCTCTCCTCACATCATTCGTTCATCCGGATCAAGTCTCCCGTCTGTAT
GCTGTGCTGGCTATCATGATGACGATCGGAAGTATGGTTATGGCACCCTT
GCTGTCAAAGGCCTTTTCATGGGGATTGGATCTTGGAGAGGACAGGAGCG
GAATCGTATTTCTGACTGTTGCTGCTTTGTACCTAGTGTTTGGATTGCCA
TTGTGGATCATTAAGTTGCCGAGTCAAGATGAGGGTATTCATGGCTAAGG
GCCCCATTTTCTTCCAAGTCTCTGCTGCTGCACTCATATCCACAGTAGTC
GGCATTCCATTATCCTGGTTGCTGATGAAAATCGACCCATTTAACGCACT
ACTAGCCGCTTCCGGCTTTATAGCTCTTGGGAATATGCTGGTTCTCTTCC
TCCCTGAAACTCTTCAGCAAGCAAAGAAGGTTGATGCTGCTTTGAATCAC
CTCGCCCAAGATTCGCACACCGATCAAGCAATCTCACCTACGCGAGCTAA
ATCGTCAAATATCGATTTATGGCTCTTGATTGTCAAAGCTGTCCACGATT
CTCGCTTCATATTGGCAAACCCTGGTCTTTGTGCTCTTATATTCACATTT
ATTCTGTCCAGCTTGTCGAACAACAGTGTTTCGATTCTTTTTCAACTTGC
CTCACTGAGGTTTCACTGGTCACTGGCAGATTTTATTTCAACGACACTTT
CGACGTTCGGTGGATCTGGGCCGGGAATTTGTTTCTTCTGATCGGAGGCG
GGAGTGCTGTTTCCCAGAACTCTATTTATGCCATCGTCGCGGATGTTGCA
CCGGAGGCCAAAAGATGGAGGCTGTTCCCGAATCTCAGGATTACCAACCG
ACAGCTGAAACTCCCCTGCTACAACGAACATCCCGATGCGATGATGAAGA
GCCAACGACGACACCTCACCCGCACTTGACCCGTGTGGTGGTGATTATCA
TTATCTGCATCTTCCTGCTCGAATTGGGAGACTACATGATGCGGGCACCA
TCCATCCGGGTTCTGGAAGACATCACCTGTCGGAAGTTTTACGGATCCAC
CACTCCATTCAACTCCCATGTCCCTCGACCTATCCCCGAACATGAATGCA
AGGTCGCTCCCGTACAAGCGGAGATAGCGATGATAAAGGGTTGGGACAAT
GCTCTCTCTTGTATACCTGCTATCTTTCTTGCTATACCGTATGGGTATGT
GGGAGATCGGTATGGGAGAAAGATAATGCTTGTTTTGGCCGTGCTTGGTA
TACTACTGTCACAGATTTGGGTGCAATTCGTTCGCTAGTTTCCTCCTTCC
CTTCAGCTCAGTCACCAACTTTGTAATCCTCATCGGTATTCTGCCAGTGA
TCTATTCGGTCCTAGGTTCGCGCTTCGGCCTCCGCCCCTCGAGCAAAGAT
CTTGTCGTCGCGCGTGGTTCTCTCGTGTTCCACATCCTCGGTGCTCTCGC
TATTGCTTTCCCTGCCGGTCCCTTGCTCCTTATCTTCGGTACCTTTATCT
TTGCTTGCGGTGACGGCCATGTTTCCGCCTCACGCTCTCTCCTCACATCA
TTCGTTCATCCGGATCAAGTCTCCCGTCTGTATGCTGTGCTGGCTATCAT
GATGACGATCGGAAGTATGGTTATGGCACCCTTGCTGTCAAAGGCCTTTT
CATGGGGATTGGATCTTGGAGAGGACAGGAGCGGAATCGTATTTCTGACT
GTTGCTGCTTTGTACCTAGTGTTTGGATTGCCATTGTGGATCATTAAGTT
GCCGAGTCAAGATGAGGGTATTCATGGCTAAGGGCCCCATTTTCTTCCAA
GTCTCTGCTGCTGCACTCATATCCACAGTAGTCGGCATTCCATTATCCTG
GTTGCTGATGAAAATCGACCCATTTAACGCACTACTAGCCGCTTCCGGCT
TTATAGCTCTTGGGAATATGCTGGTTCTCTTCCTCCCTGAAACTCTTCAG
CAAGCAAAGAAGGTTGATGCTGCTTTGAATCACCTCGCCCAAGATTCGCA
CACCGATCAAGCAATCTCACCTACGCGAGCTAAATCGTCAAATATCGATT
TATGGCTCTTGATTGTCAAAGCTGTCCACGATTCTCGCTTCATATTGGCA
AACCCTGGTCTTTGTGCTCTTATATTCACATTTATTCTGTCCAGCTTGTC
GAACAACAGTGTTTCGATTCTTTTTCAACTTGCCTCACTGAGGTTTCACT
GGTCACTGGCAGATTTTATTTCAACGACACTTTCGACGTTCGGTGGATCT
GGGCCGGGAATTTGTTTCTTCTGATCGGAGGCGGGAGTGCTGTTTCCCAG
AACTCTATTTATGCCATCGTCGCGGATGTTGCACCGGAGGCCAAAAGATG
GAGGCTGTTCCCGAATCTCAGGATTACCAACCGACAGCTGAAACTCCCCT
GCTACAACGAACATCCCGATGCGATGATGAAGAGCCAACGACGACACCTC
ACCCGCACTTGACCCGTGTGGTGGTGATTATCATTATCTGCATCTTCCTG
CTCGAATTGGGAGACTACATGATGCGGGCACCATCCATCCGGGTTCTGGA
AGACATCACCTGTCGGAAGTTTTACGGATCCACCACTCCATTCAACTCCC
ATGTCCCTCGACCTATCCCCGAACATGAATGCAAGGTCGCTCCCGTACAA
GCGGAGATAGCGATGATAAAGGGTTGGGACAATGCTCTCTCTTGTATACC
TGCTATCTTTCTTGCTATACCGTATGGGTATGTGGGAGATCGGTATGGGA
GAAAGATAATGCTTGTTTTGGCCGTGCTTGGTATACTACTGTCACAGATT
TGGGTGCAATTCGTTCGCTAGTTTCCTCCTTCCCTTCAGCTCAGTCACCA
ACTTTGTAATCCTCATCGGTATTCTGCCAGTGATCTATTCGGTCCTAGGT
TCGCGCTTCGGCCTCCGCCCCTCGAGCAAAGATCTTGTCGTCGCGCGTGG
TTCTCTCGTGTTCCACATCCTCGGTGCTCTCGCTATTGCTTTCCCTGCCG
GTCCCTTGCTCCTTATCTTCGGTACCTTTATCTTTGCTTGCGGTGACGGC
CATGTTTCCGCCTCACGCTCTCTCCTCACATCATTCGTTCATCCGGATCA
AGTCTCCCGTCTGTATGCTGTGCTGGCTATCATGATGACGATCGGAAGTA
TGGTTATGGCACCCTTGCTGTCAAAGGCCTTTTCATGGGGATTGGATCTT
GGAGAGGACAGGAGCGGAATCGTATTTCTGACTGTTGCTGCTTTGTACCT
AGTGTTTGGATTGCCATTGTGGATCATTAAGTTGCCGAGTCAAGATGAGG
GTATTCATGGCTAAGGGCCCCATTTTCTTCCAAGTCTCTGCTGCTGCACT
CATATCCACAGTAGTCGGCATTCCATTATCCTGGTTGCTGATGAAAATCG
ACCCATTTAACGCACTACTAGCCGCTTCCGGCTTTATAGCTCTTGGGAAT
ATGCTGGTTCTCTTCCTCCCTGAAACTCTTCAGCAAGCAAAGAAGGTTGA
TGCTGCTTTGAATCACCTCGCCCAAGATTCGCACACCGATCAAGCAATCT
CACCTACGCGAGCTAAATCGTCAAATATCGATTTATGGCTCTTGATTGTC
AAAGCTGTCCACGATTCTCGCTTCATATTGGCAAACCCTGGTCTTTGTGC
TCTTATATTCACATTTATTCTGTCCAGCTTGTCGAACAACAGTGTTTCGA
TTCTTTTTCAACTTGCCTCACTGAGGTTTCACTGGTCACTGGCAGATTTT
ATTTCAACGACACTTTCGACGTTCGGTGGATCTGGGCCGGGAATTTGTTT
CTTCTGATCGGAGGCGGGAGTGCTGTTTCCCAGAACTCTATTTATGCCAT
CGTCGCGGATGTTGCACCGGAGGCCAAAAGATGGAGGCTGTTCCCGAATC
TCAGGATTACCAACCGACAGCTGAAACTCCCCTGCTACAACGAACATCCC
GATGCGATGATGAAGAGCCAACGACGACACCTCACCCGCACTTGACCCGT
GTGGTGGTGATTATCATTATCTGCATCTTCCTGCTCGAATTGGGAGACTA
CATGATGCGGGCACCATCCATCCGGGTTCTGGAAGACATCACCTGTCGGA
AGTTTTACGGATCCACCACTCCATTCAACTCCCATGTCCCTCGACCTATC
CCCGAACATGAATGCAAGGTCGCTCCCGTACAAGCGGAGATAGCGATGAT
AAAGGGTTGGGACAATGCTCTCTCTTGTATACCTGCTATCTTTCTTGCTA
TACCGTATGGGTATGTGGGAGATCGGTATGGGAGAAAGATAATGCTTGTT
TTGGCCGTGCTTGGTATACTACTGTCACAGATTTGGGTGCAATTCGTTCG
CTAGTTTCCTCCTTCCCTTCAGCTCAGTCACCAACTTTGTAATCCTCATC
GGTATTCTGCCAGTGATCTATTCGGTCCTAGGTTCGCGCTTCGGCCTCCG
CCCCTCGAGCAAAGATCTTGTCGTCGCGCGTGGTTCTCTCGTGTTCCACA
TCCTCGGTGCTCTCGCTATTGCTTTCCCTGCCGGTCCCTTGCTCCTTATC
TTCGGTACCTTTATCTTTGCTTGCGGTGACGGCCATGTTTCCGCCTCACG
CTCTCTCCTCACATCATTCGTTCATCCGGATCAAGTCTCCCGTCTGTATG
CTGTGCTGGCTATCATGATGACGATCGGAAGTATGGTTATGGCACCCTTG
CTGTCAAAGGCCTTTTCATGGGGATTGGATCTTGGAGAGGACAGGAGCGG
AATCGTATTTCTGACTGTTGCTGCTTTGTACCTAGTGTTTGGATTGCCAT
TGTGGATCATTAAGTTGCCGAGTCAAGATGAGGGTATTCATGGCTAAGGG
CCCCATTTTCTTCCAAGTCTCTGCTGCTGCACTCATATCCACAGTAGTCG
GCATTCCATTATCCTGGTTGCTGATGAAAATCGACCCATTTAACGCACTA
CTAGCCGCTTCCGGCTTTATAGCTCTTGGGAATATGCTGGTTCTCTTCCT
CCCTGAAACTCTTCAGCAAGCAAAGAAGGTTGATGCTGCTTTGAATCACC
TCGCCCAAGATTCGCACACCGATCAAGCAATCTCACCTACGCGAGCTAAA
TCGTCAAATATCGATTTATGGCTCTTGATTGTCAAAGCTGTCCACGATTC
TCGCTTCATATTGGCAAACCCTGGTCTTTGTGCTCTTATATTCACATTTA
TTCTGTCCAGCTTGTCGAACAACAGTGTTTCGATTCTTTTTCAACTTGCC
TCACTGAGGTTTCACTGGTCACTGGCAGATTTTATTTCAACGACACTTTC
GACGTTCGGTGGATCTGGGCCGGGAATTTGTTTCTTCTGATCGGAGGCGG
GAGTGCTGTTTCCCAGAACTCTATTTATGCCATCGTCGCGGATGTTGCAC
CGGAGGCCAAAAGATGGAGGCTGTTCCCGAATCTCAGGATTACCAACCGA
CAGCTGAAACTCCCCTGCTACAACGAACATCCCGATGCGATGATGAAGAG
CCAACGACGACACCTCACCCGCACTTGACCCGTGTGGTGGTGATTATCAT
TATCTGCATCTTCCTGCTCGAATTGGGAGACTACATGATGCGGGCACCAT
CCATCCGGGTTCTGGAAGACATCACCTGTCGGAAGTTTTACGGATCCACC
ACTCCATTCAACTCCCATGTCCCTCGACCTATCCCCGAACATGAATGCAA
GGTCGCTCCCGTACAAGCGGAGATAGCGATGATAAAGGGTTGGGACAATG
CTCTCTCTTGTATACCTGCTATCTTTCTTGCTATACCGTATGGGTATGTG
GGAGATCGGTATGGGAGAAAGATAATGCTTGTTTTGGCCGTGCTTGGTAT
ACTACTGTCACAGATTTGGGTGCAATTCGTTC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004628-T1.utr3p1 | KJC3_004628-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:258767..260518 - |
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