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KJC3_004630-T1, KJC3_004630-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004630-T1
Unique NameKJC3_004630-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:267835..269526-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004630-T1 ID=KJC3_004630-T1|Name=KJC3_004630-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1692bp|location=Sequence derived from alignment at ch4:267835..269526- (Aspergillus niger KJC3)
ATGGACCAGCCGTCAACTTTCATGCAAGGGCTACTGTCCAGTCTTTACAC
CCTGGGGTGCTTTTTCGGTTGTGTCGGAAGCATATCGTTCAGTGAGAAGA
TCGGCCGTAAGAACCCTATCTTAATCGGCACAATCCTGATCTCCATCGGC
ACTGTCATTCAAACAGTTGCATACTCGTCAGCTCAATTTATCGTCGGGCG
GATCGTGGCTGGGATGGGAACCGGACTGAACACGTCCGTGATCCCAGTAT
GGCAGGCCGAGACACTTCCAGCAAAGAAGCGAGAGCGATTCGGAGCCATT
CAGTATGTGTTGGTTTGCACAGGTACCACCATCAGCTACTGGATGGCGTA
TGCTCTGTCCTACTCCGCAAATAGTGCTTTTCAGTGGCGCTTCCTTGTCG
CGGCGCAACTCGTGTTTGCGGTGCTGATAATGTGCCTTGGTATATATCTC
GTGCATATTCGCAACAATTGTTTTGGTGCCATAGCTGATGGTGTGCAGTT
CCATTGATGCCGGAATCCCCTAGATGGCATTTTGTCCACGGGCAGCGAGA
CAAAGCCCTGTGTACACTAATGAGAATGCATGGGACATCGAATGAACAAC
AAAGCGAAGTCCAAGCAGAGGTCCATTTGATCCAGCAGGCTATGGAGCTT
GAAGCCAGGCATGGAGCGACCAGATGGGTTGATCTATTTAAGAACGAGCC
ACGCACACAAAATTTCCGACGTCTAATGCTGGGGTGGTGGTAAGTCGCGC
TTATCAGTCCTTGCGGGACGTTCCGGCTGATTAGATGTATCATATGCAGG
CTGATGTTCATGGTGATGTGGTCTGGCGTCTGCAGTATCGGCTATTACAT
TTCATACCTCTTCGAAGTCTCCGTCGGTCTCAGCCATAACTTGTCCCTGC
TTCTTTCCGGGTTCAACGGTCTCTGGTATCTCTTATCAGCATTCATCCCA
TTTTTTGTGATCAATCATCTAGGCAAGCGGCGGTGTATGATGATTAGCGC
TGCCGGCATGTGCTGCTGTTTCCTGACAATGTCACTAACGATCCGGTCGG
GCACGTTTGCAGCCTCGATTGTCTGCATTGTCGCCTTCTTCCTGTACTAC
ACCTTCTTCGCACTGGGATACCTGGCAATACCCTGGTTGTACAACGCGGA
GATCATGCCTCTCCACCTGCGATCCCAGGGGACAGCTCTGACAACCTCCT
CGAATTGGATCTGGAACTTTGCCACCGTCATGATGACACCCTCGCTGATG
AGCCAGCAGGGATGGAAGGGGTATCTAGTATTTACGGTGTTTAACTTCTG
CTTTGTGCCGGTGATCTATCTCCTATATCCGGAAACGACTGGCCGGCGGC
TCGAGGAGATCGACGCGATATTCTACGGGACTTCGGTCTTGGTGGCCCGA
ACGGAGTGGGCCGAAAAAGGCCGGTTTGAAGCCAACCCGCTGGGAGGAGT
CATCCAGGGGCTAGAACCTTCGCAGAAGGAAACTCAACACCACGTGGAGT
ACGTCAGCTCATACTCGGAGACTTGTTAGCAAGATTCACCACAGGCGGCT
TTGATTACTTTGCAATTGTGCTGGTTTGGGCATCTGTTGCACCTTGTGGA
CGGTTGTGCATTTTATCTGTTTGGAGCGGACGGAGGGATTACCCAGCTGC
AGCGTCATTATGCAGGCGTATACCAATACTCCGTAATGTCCC
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Coding sequence (CDS) from alignment at ch4:267835..269526-

>KJC3_004630-T1 ID=KJC3_004630-T1|Name=KJC3_004630-T1|organism=Aspergillus niger KJC3|type=CDS|length=4230bp|location=Sequence derived from alignment at ch4:267835..269526- (Aspergillus niger KJC3)
GCTGATGTTCATGGTGATGTGGTCTGGCGTCTGCAGTATCGGCTATTACA
TTTCATACCTCTTCGAAGTCTCCGTCGGTCTCAGCCATAACTTGTCCCTG
CTTCTTTCCGGGTTCAACGGTCTCTGGTATCTCTTATCAGCATTCATCCC
ATTTTTTGTGATCAATCATCTAGGCAAGCGGCGGTGTATGATGATTAGCG
CTGCCGGCATGTGCTGCTGTTTCCTGACAATGTCACTAACGATCCGGTCG
GGCACGTTTGCAGCCTCGATTGTCTGCATTGTCGCCTTCTTCCTGTACTA
CACCTTCTTCGCACTGGGATACCTGGCAATACCCTGGTTGTACAACGCGG
AGATCATGCCTCTCCACCTGCGATCCCAGGGGACAGCTCTGACAACCTCC
TCGAATTGGATCTGGAACTTTGCCACCGTCATGATGACACCCTCGCTGAT
GAGCCAGCAGGGATGGAAGGGGTATCTAGTATTTACGGTGTTTAACTTCT
GCTTTGTGCCGGTGATCTATCTCCTATATCCGGAAACGACTGGCCGGCGG
CTCGAGGAGATCGACGCGATATTCTACGGGACTTCGGTCTTGGTGGCCCG
AACGGAGTGGGCCGAAAAAGGCCGGTTTGAAGCCAACCCGCTGGGAGGAG
TCATCCAGGGGCTAGAACCTTCGCAGAAGGAAACTCAACACCACGTGGAG
TACGTCAGCTCATACTCGGAGACTTGTTAGTTCCATTGATGCCGGAATCC
CCTAGATGGCATTTTGTCCACGGGCAGCGAGACAAAGCCCTGTGTACACT
AATGAGAATGCATGGGACATCGAATGAACAACAAAGCGAAGTCCAAGCAG
AGGTCCATTTGATCCAGCAGGCTATGGAGCTTGAAGCCAGGCATGGAGCG
ACCAGATGGGTTGATCTATTTAAGAACGAGCCACGCACACAAAATTTCCG
ACGTCTAATGCTGGGGTGGTGATGGACCAGCCGTCAACTTTCATGCAAGG
GCTACTGTCCAGTCTTTACACCCTGGGGTGCTTTTTCGGTTGTGTCGGAA
GCATATCGTTCAGTGAGAAGATCGGCCGTAAGAACCCTATCTTAATCGGC
ACAATCCTGATCTCCATCGGCACTGTCATTCAAACAGTTGCATACTCGTC
AGCTCAATTTATCGTCGGGCGGATCGTGGCTGGGATGGGAACCGGACTGA
ACACGTCCGTGATCCCAGTATGGCAGGCCGAGACACTTCCAGCAAAGAAG
CGAGAGCGATTCGGAGCCATTCAGTATGTGTTGGTTTGCACAGGTACCAC
CATCAGCTACTGGATGGCGTATGCTCTGTCCTACTCCGCAAATAGTGCTT
TTCAGTGGCGCTTCCTTGTCGCGGCGCAACTCGTGTTTGCGGTGCTGATA
ATGTGCCTTGGCTGATGTTCATGGTGATGTGGTCTGGCGTCTGCAGTATC
GGCTATTACATTTCATACCTCTTCGAAGTCTCCGTCGGTCTCAGCCATAA
CTTGTCCCTGCTTCTTTCCGGGTTCAACGGTCTCTGGTATCTCTTATCAG
CATTCATCCCATTTTTTGTGATCAATCATCTAGGCAAGCGGCGGTGTATG
ATGATTAGCGCTGCCGGCATGTGCTGCTGTTTCCTGACAATGTCACTAAC
GATCCGGTCGGGCACGTTTGCAGCCTCGATTGTCTGCATTGTCGCCTTCT
TCCTGTACTACACCTTCTTCGCACTGGGATACCTGGCAATACCCTGGTTG
TACAACGCGGAGATCATGCCTCTCCACCTGCGATCCCAGGGGACAGCTCT
GACAACCTCCTCGAATTGGATCTGGAACTTTGCCACCGTCATGATGACAC
CCTCGCTGATGAGCCAGCAGGGATGGAAGGGGTATCTAGTATTTACGGTG
TTTAACTTCTGCTTTGTGCCGGTGATCTATCTCCTATATCCGGAAACGAC
TGGCCGGCGGCTCGAGGAGATCGACGCGATATTCTACGGGACTTCGGTCT
TGGTGGCCCGAACGGAGTGGGCCGAAAAAGGCCGGTTTGAAGCCAACCCG
CTGGGAGGAGTCATCCAGGGGCTAGAACCTTCGCAGAAGGAAACTCAACA
CCACGTGGAGTACGTCAGCTCATACTCGGAGACTTGTTAGTTCCATTGAT
GCCGGAATCCCCTAGATGGCATTTTGTCCACGGGCAGCGAGACAAAGCCC
TGTGTACACTAATGAGAATGCATGGGACATCGAATGAACAACAAAGCGAA
GTCCAAGCAGAGGTCCATTTGATCCAGCAGGCTATGGAGCTTGAAGCCAG
GCATGGAGCGACCAGATGGGTTGATCTATTTAAGAACGAGCCACGCACAC
AAAATTTCCGACGTCTAATGCTGGGGTGGTGATGGACCAGCCGTCAACTT
TCATGCAAGGGCTACTGTCCAGTCTTTACACCCTGGGGTGCTTTTTCGGT
TGTGTCGGAAGCATATCGTTCAGTGAGAAGATCGGCCGTAAGAACCCTAT
CTTAATCGGCACAATCCTGATCTCCATCGGCACTGTCATTCAAACAGTTG
CATACTCGTCAGCTCAATTTATCGTCGGGCGGATCGTGGCTGGGATGGGA
ACCGGACTGAACACGTCCGTGATCCCAGTATGGCAGGCCGAGACACTTCC
AGCAAAGAAGCGAGAGCGATTCGGAGCCATTCAGTATGTGTTGGTTTGCA
CAGGTACCACCATCAGCTACTGGATGGCGTATGCTCTGTCCTACTCCGCA
AATAGTGCTTTTCAGTGGCGCTTCCTTGTCGCGGCGCAACTCGTGTTTGC
GGTGCTGATAATGTGCCTTGGCTGATGTTCATGGTGATGTGGTCTGGCGT
CTGCAGTATCGGCTATTACATTTCATACCTCTTCGAAGTCTCCGTCGGTC
TCAGCCATAACTTGTCCCTGCTTCTTTCCGGGTTCAACGGTCTCTGGTAT
CTCTTATCAGCATTCATCCCATTTTTTGTGATCAATCATCTAGGCAAGCG
GCGGTGTATGATGATTAGCGCTGCCGGCATGTGCTGCTGTTTCCTGACAA
TGTCACTAACGATCCGGTCGGGCACGTTTGCAGCCTCGATTGTCTGCATT
GTCGCCTTCTTCCTGTACTACACCTTCTTCGCACTGGGATACCTGGCAAT
ACCCTGGTTGTACAACGCGGAGATCATGCCTCTCCACCTGCGATCCCAGG
GGACAGCTCTGACAACCTCCTCGAATTGGATCTGGAACTTTGCCACCGTC
ATGATGACACCCTCGCTGATGAGCCAGCAGGGATGGAAGGGGTATCTAGT
ATTTACGGTGTTTAACTTCTGCTTTGTGCCGGTGATCTATCTCCTATATC
CGGAAACGACTGGCCGGCGGCTCGAGGAGATCGACGCGATATTCTACGGG
ACTTCGGTCTTGGTGGCCCGAACGGAGTGGGCCGAAAAAGGCCGGTTTGA
AGCCAACCCGCTGGGAGGAGTCATCCAGGGGCTAGAACCTTCGCAGAAGG
AAACTCAACACCACGTGGAGTACGTCAGCTCATACTCGGAGACTTGTTAG
TTCCATTGATGCCGGAATCCCCTAGATGGCATTTTGTCCACGGGCAGCGA
GACAAAGCCCTGTGTACACTAATGAGAATGCATGGGACATCGAATGAACA
ACAAAGCGAAGTCCAAGCAGAGGTCCATTTGATCCAGCAGGCTATGGAGC
TTGAAGCCAGGCATGGAGCGACCAGATGGGTTGATCTATTTAAGAACGAG
CCACGCACACAAAATTTCCGACGTCTAATGCTGGGGTGGTGATGGACCAG
CCGTCAACTTTCATGCAAGGGCTACTGTCCAGTCTTTACACCCTGGGGTG
CTTTTTCGGTTGTGTCGGAAGCATATCGTTCAGTGAGAAGATCGGCCGTA
AGAACCCTATCTTAATCGGCACAATCCTGATCTCCATCGGCACTGTCATT
CAAACAGTTGCATACTCGTCAGCTCAATTTATCGTCGGGCGGATCGTGGC
TGGGATGGGAACCGGACTGAACACGTCCGTGATCCCAGTATGGCAGGCCG
AGACACTTCCAGCAAAGAAGCGAGAGCGATTCGGAGCCATTCAGTATGTG
TTGGTTTGCACAGGTACCACCATCAGCTACTGGATGGCGTATGCTCTGTC
CTACTCCGCAAATAGTGCTTTTCAGTGGCGCTTCCTTGTCGCGGCGCAAC
TCGTGTTTGCGGTGCTGATAATGTGCCTTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004630KJC3_004630Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004630-T1KJC3_004630-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004630-T1.cdsKJC3_004630-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004630-T1.utr3p1KJC3_004630-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004630-T1.exon3KJC3_004630-T1.exon3Aspergillus niger KJC3exon
KJC3_004630-T1.exon2KJC3_004630-T1.exon2Aspergillus niger KJC3exon
KJC3_004630-T1.exon1KJC3_004630-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:267835..269526 -
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