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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:269705..273036- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004631-T1 ID=KJC3_004631-T1|Name=KJC3_004631-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3332bp|location=Sequence derived from alignment at ch4:269705..273036- (Aspergillus niger KJC3)
TTTTAGTCAACCCAATACCGTCTCTCTTGCCATCATGGACGAGGAACCTC
CTTCTCCCATCAGCACGGATGACAAATCCATCCACGAGCCCCCCATAATC
TCCTTCGATAACAGCGGTGACGGCCCGCTTCGAGTGCCCGGGTTTGGTGA
CGTCCCTCTGGACTATGAGCTCCCATGCGACGCGCGCTTTGCCCATGGAA
TCAAAGAGTGGCGCCAGGCACCAGCCGTCACGGCACGTGAGCTGGCCATG
ACAGCTGTAATGAATCGCCTGACCGACCGCCCAAACTGGCATGTCGATGT
CTTCGATGATGAGGTCGTGGCGCGCTGGCGGCAAGACAGTAGCGCCTCCA
TCGCGATGAATCCTCTCCTGAGTAACCGGGCCTGGGACTGGTGCGTGCAG
GAACTACGCGACAAGGCCACCGAGTTTCGGCAACAGGGACACATCCGGGT
GCTGGACACTGGGTCTTGTGTCTGCAAATCTGATCATGTTCCTGCGCTTC
GAACAGGGGAGCTGGCCAGCGAGTTCCGACGCGCAGTAAGACCGGTGCTT
CGGTCCCTAATGCACTCCGGATTGTTGGATTGGCGGTCAAGGCGTAGATT
AAGTATCGTCGACGCAGCCTTGTTTCCACTGGTCTATGGGCGGAGCTTGG
TCTTGACTGACGGGGGTCGGGTGGACATAGAGGATGTGCTGGGCGCGTAT
GAAGGTGCGACAACCCTTGCGCCTACTCATGTCGACAAGAGAACAGATTC
GGCGGATGTTCAGAGACAAATTGAGAAGGCGCAATGGCTGTCTGTGGGCG
TGAATGCCAACTATAAAACAGCACCTCACTATCGATGGAGCGCAAATTAC
CAGGCCTTGCCATCTGAAGTGGAGTTTGTAGGGCATACAGGGTCGACGCA
GGTGCGCCTTACCTCGTACATCAATAATCTTCACCCGGTTCACCAGAACC
TCTACCGTGCTATCGAAAAGTTGATAGGCCGGGCGATCCCGTTATGGAAC
GACTGTCTGGTGCTGGGACAGCGCGGCTGGAGGGATATTATGAATCAAGG
CCAGCTGGGACCGGTGCCACTACGTATTATCACGTATGGGGTAGAGTGGG
AAAATGAGCTTCCCGAATGCCTGCTCGCCTTCCGGATTCCAAGTGAGACG
AGGAAGTGGATGTACCGCAGAGCCCAAGAAGCGCTCTTAAACAGTGCGGG
AGATAACACAGACGAGGGTCGCAAAAGGTACCAACGTGCACAAGAACGGT
TGAAAGATTTTCCAGACGTTGTAGGGAGTGAAGAAAAGGAGTTACCGCCC
CCAGAGTCAAACCTCTGGCAACGCGCAAAGGAGTATCTCGAACTTCCTGA
GGATGGATCAGCTTCCCCCGTTCCTGCCCCGGATGATTGGCAGCAGAACA
CCTGGCGTGCGATCGAAGGCAAAGCCAAGCGAGTGGTGCGATACCGTCAC
CCGGAGCCAGGGACGGCTTTCTCTTACGAAGAGTGGAAGACGGGGCGTCA
CCACGAGAGAGCCGTGGTTGATCTAGTGCGCGAGCGGATGGAATGGCGCC
GGATTCCCTACACTCCAATCACCCCTCCCCACAAACCATATACCATTCGG
CTCCAGGACATGTTCCGCTCGCAAGGTCTGCAAGTAATTGTAAACATGGA
GAACATTGAGCTTACCCCTGAAAGTCCGGACTACAAAGGGACGGACTGGC
ACATGGAAGGCCAACTCAACGAACATATTGTAGGTATCGCCGTCTTCGCA
TATGATATCGACAATATAACCAAGCCCCAAATTGCTTTCCGACAGAATAC
TAAGATGGATGAAACATTCTACCGATATAGGATGCGTGATGAGCGAGGAC
AAAGGTGGCATCCACGAGCAAAACCGGCCCACAGCTATGGGAAACCTGGC
ATCTACGGTGTGGAAGAAATCGCGAGAATACTGGGATATTGCAGTTGGGA
CCTTGATACTGAAAACTTTATGATGAGAACATGGCAGGACAAAGGTGTAA
TATCGATCGCGCAGGGGCGTTTGGTCACATTTCCCAACGTCCTAGAGCAC
CGTGCCCAGCCCTTCTCCCTAGCTGATCGGAGTCGCTCGGGGCATTATCG
ATACATCAAATTGTATCTGGTTGACCCTCACTATCGCATCTGCTCCACCC
GCAATGTGCCACCCCAGCAGCATCACTGGTGGGCAGACGCGGTCGGTGAG
GATCTAAGTGCTGCCGGACTACCCCAAGAGATGATTGATCAGATCATGAC
AGAGACTGGCTGCTGGCCTATGGGGTTGCCGGAAGCTCGCCGGCACCGCC
ACGCGTTTCTGAAAGAGCATCGCTGGAATAACCTGGTACGGATCTACACA
ATGGATCGTCCATACTTCAATTGTTGGCCATACGTAGTAACGGAGAGACA
TGTTTGAAAGTCTGTCGGGCGTCAGAGGGAGAGATTCATTATGAGTGACA
AATCGCTCAATGGGAAGGATCAATCTTGCCATGTAAGGAATGAATTCAAA
CTTTCCAAAAATTTCTTACAAACAGCTCTAAAGGTAACTCCATAAAATTC
GAAGCTCACAGCAGGCACATAATGTATCTGCTTTGAGTCGGAGAGTTATG
TCCTCGCAACTAACCCTCTTGAATATTCCTTTCAATCTTGACTTTGGGTA
TAATGAAGTGACTGTTTGCCTGGACTCATCCCATGAGGATATCGGGGTGG
ACCTCTAATACATTTACCCATCCTAATTCTTTTCGATCTGAAAACGATCT
TCGCCCTGCCGAAACAAGAATAATGCCAGTATTGGAATGGCAACCGGTTG
ATCTCCGATCCACTGACTACGTGCATTGACATGCAAGCTGCGACTGACGT
CAACCTACACTAACTAGTCGGCTGTTGGATCATACCGAACATACGCCAAA
GACAGCACAAGGAGTCCGAAAGTGCTCTCTGCTAAGGACCAAGCCGCAGT
ACCCCCCGACCCTGAGATATATAGCATGTCGGCTTGTTTCCCTTGTTGGG
TTTCAACACTTGTTCTTCAAGTCGATCAACCCCGCACTTTGTTCAATGTG
ATGGGTCAAGCAAGAAAGAGAAGGTCGCGCTGCCGCGTGTACCTCAGCGG
AACTGTGCCGATCGTCCGAAGCGTCGGAGAAATATCCTGGTTGACGCAAC
GAGGTTCGATATCCGGGGTCTGGGTAATATGATGATCTGGGGAAACAGTG
AAGTGCGGGGTGTAGACTTACCATTGCATATCTTGAGCAGCGAGACCCCT
TCATCCTCCTACAGAGCTGGAGGAGTCTCTACTCTTCATCGTAGACAATA
TAATCGAAGTGCGCAATCTGACCGTTGCCGAC back to topCoding sequence (CDS) from alignment at ch4:269705..273036- >KJC3_004631-T1 ID=KJC3_004631-T1|Name=KJC3_004631-T1|organism=Aspergillus niger KJC3|type=CDS|length=2373bp|location=Sequence derived from alignment at ch4:269705..273036- (Aspergillus niger KJC3)
ATGGACGAGGAACCTCCTTCTCCCATCAGCACGGATGACAAATCCATCCA
CGAGCCCCCCATAATCTCCTTCGATAACAGCGGTGACGGCCCGCTTCGAG
TGCCCGGGTTTGGTGACGTCCCTCTGGACTATGAGCTCCCATGCGACGCG
CGCTTTGCCCATGGAATCAAAGAGTGGCGCCAGGCACCAGCCGTCACGGC
ACGTGAGCTGGCCATGACAGCTGTAATGAATCGCCTGACCGACCGCCCAA
ACTGGCATGTCGATGTCTTCGATGATGAGGTCGTGGCGCGCTGGCGGCAA
GACAGTAGCGCCTCCATCGCGATGAATCCTCTCCTGAGTAACCGGGCCTG
GGACTGGTGCGTGCAGGAACTACGCGACAAGGCCACCGAGTTTCGGCAAC
AGGGACACATCCGGGTGCTGGACACTGGGTCTTGTGTCTGCAAATCTGAT
CATGTTCCTGCGCTTCGAACAGGGGAGCTGGCCAGCGAGTTCCGACGCGC
AGTAAGACCGGTGCTTCGGTCCCTAATGCACTCCGGATTGTTGGATTGGC
GGTCAAGGCGTAGATTAAGTATCGTCGACGCAGCCTTGTTTCCACTGGTC
TATGGGCGGAGCTTGGTCTTGACTGACGGGGGTCGGGTGGACATAGAGGA
TGTGCTGGGCGCGTATGAAGGTGCGACAACCCTTGCGCCTACTCATGTCG
ACAAGAGAACAGATTCGGCGGATGTTCAGAGACAAATTGAGAAGGCGCAA
TGGCTGTCTGTGGGCGTGAATGCCAACTATAAAACAGCACCTCACTATCG
ATGGAGCGCAAATTACCAGGCCTTGCCATCTGAAGTGGAGTTTGTAGGGC
ATACAGGGTCGACGCAGGTGCGCCTTACCTCGTACATCAATAATCTTCAC
CCGGTTCACCAGAACCTCTACCGTGCTATCGAAAAGTTGATAGGCCGGGC
GATCCCGTTATGGAACGACTGTCTGGTGCTGGGACAGCGCGGCTGGAGGG
ATATTATGAATCAAGGCCAGCTGGGACCGGTGCCACTACGTATTATCACG
TATGGGGTAGAGTGGGAAAATGAGCTTCCCGAATGCCTGCTCGCCTTCCG
GATTCCAAGTGAGACGAGGAAGTGGATGTACCGCAGAGCCCAAGAAGCGC
TCTTAAACAGTGCGGGAGATAACACAGACGAGGGTCGCAAAAGGTACCAA
CGTGCACAAGAACGGTTGAAAGATTTTCCAGACGTTGTAGGGAGTGAAGA
AAAGGAGTTACCGCCCCCAGAGTCAAACCTCTGGCAACGCGCAAAGGAGT
ATCTCGAACTTCCTGAGGATGGATCAGCTTCCCCCGTTCCTGCCCCGGAT
GATTGGCAGCAGAACACCTGGCGTGCGATCGAAGGCAAAGCCAAGCGAGT
GGTGCGATACCGTCACCCGGAGCCAGGGACGGCTTTCTCTTACGAAGAGT
GGAAGACGGGGCGTCACCACGAGAGAGCCGTGGTTGATCTAGTGCGCGAG
CGGATGGAATGGCGCCGGATTCCCTACACTCCAATCACCCCTCCCCACAA
ACCATATACCATTCGGCTCCAGGACATGTTCCGCTCGCAAGGTCTGCAAG
TAATTGTAAACATGGAGAACATTGAGCTTACCCCTGAAAGTCCGGACTAC
AAAGGGACGGACTGGCACATGGAAGGCCAACTCAACGAACATATTGTAGG
TATCGCCGTCTTCGCATATGATATCGACAATATAACCAAGCCCCAAATTG
CTTTCCGACAGAATACTAAGATGGATGAAACATTCTACCGATATAGGATG
CGTGATGAGCGAGGACAAAGGTGGCATCCACGAGCAAAACCGGCCCACAG
CTATGGGAAACCTGGCATCTACGGTGTGGAAGAAATCGCGAGAATACTGG
GATATTGCAGTTGGGACCTTGATACTGAAAACTTTATGATGAGAACATGG
CAGGACAAAGGTGTAATATCGATCGCGCAGGGGCGTTTGGTCACATTTCC
CAACGTCCTAGAGCACCGTGCCCAGCCCTTCTCCCTAGCTGATCGGAGTC
GCTCGGGGCATTATCGATACATCAAATTGTATCTGGTTGACCCTCACTAT
CGCATCTGCTCCACCCGCAATGTGCCACCCCAGCAGCATCACTGGTGGGC
AGACGCGGTCGGTGAGGATCTAAGTGCTGCCGGACTACCCCAAGAGATGA
TTGATCAGATCATGACAGAGACTGGCTGCTGGCCTATGGGGTTGCCGGAA
GCTCGCCGGCACCGCCACGCGTTTCTGAAAGAGCATCGCTGGAATAACCT
GGTACGGATCTACACAATGGATCGTCCATACTTCAATTGTTGGCCATACG
TAGTAACGGAGAGACATGTTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004631-T1.utr5p1 | KJC3_004631-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR025340 |
| DBxref | PFAM:PF14033 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:269705..273036 - |
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