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KJC3_004635-T1, KJC3_004635-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004635-T1
Unique NameKJC3_004635-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:280622..281258-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004635-T1 ID=KJC3_004635-T1|Name=KJC3_004635-T1|organism=Aspergillus niger KJC3|type=mRNA|length=637bp|location=Sequence derived from alignment at ch4:280622..281258- (Aspergillus niger KJC3)
CAAAGCCCATCTCTCCTAACCACTCTACACCACCGCAACTTCCACAAAAC
TACATCTTCAAAATGCAGCTCACCAGCATTGCCATCATCCTCTTCGCCGC
AATGGGCGCCATTGCCACCCCTATCACGGCCGAGGCGGACAATCTCGCTG
CTCGGGAGGCGGAGCTTAGTAAATACGGAGGGGTAGGTTCTCCTTCTTCC
ATGTTCTCTATCGCTGTAGAGACGGAACTAACATATATGAACTATAATAG
GAATGCAGCGTTGAGCACAACACCTGCACATACCTAAAGGGCGGAAAGGA
TCACATTGTCAGTTGTCCTTCGGCTGCTAATTTGAGGGTATATTAAGACT
TCTGCTTCTATTCTGGTATGATTGATCATGCTAATTTGTTATCTACAGTG
CAAGACTGAACGTCACCACTGCGAATACGACGAGCACCATAAGACGGTCG
ATTGCCAGACTCCTGTTTGATTGGGTTGATTCGGTTTCACAGGGACATAG
GCCAATTTTTGGCTGTTTCGGTGTTTCTCCAGCTTGCCATAGCATGAGAT
TATTTCGTGTCTTTCAACAATGCCCGATTATCTTGTGTCATGGTGGGATG
GCGGTGAGTGAGCTATGGATTTTGTCCGTTGCTGGGG
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Coding sequence (CDS) from alignment at ch4:280622..281258-

>KJC3_004635-T1 ID=KJC3_004635-T1|Name=KJC3_004635-T1|organism=Aspergillus niger KJC3|type=CDS|length=837bp|location=Sequence derived from alignment at ch4:280622..281258- (Aspergillus niger KJC3)
TGCAAGACTGAACGTCACCACTGCGAATACGACGAGCACCATAAGACGGT
CGATTGCCAGACTCCTGTTTGAGAATGCAGCGTTGAGCACAACACCTGCA
CATACCTAAAGGGCGGAAAGGATCACATTGTCAGTTGTCCTTCGGCTGCT
AATTTGAGGATGCAGCTCACCAGCATTGCCATCATCCTCTTCGCCGCAAT
GGGCGCCATTGCCACCCCTATCACGGCCGAGGCGGACAATCTCGCTGCTC
GGGAGGCGGAGCTTAGTAAATACGGAGGGTGCAAGACTGAACGTCACCAC
TGCGAATACGACGAGCACCATAAGACGGTCGATTGCCAGACTCCTGTTTG
AGAATGCAGCGTTGAGCACAACACCTGCACATACCTAAAGGGCGGAAAGG
ATCACATTGTCAGTTGTCCTTCGGCTGCTAATTTGAGGATGCAGCTCACC
AGCATTGCCATCATCCTCTTCGCCGCAATGGGCGCCATTGCCACCCCTAT
CACGGCCGAGGCGGACAATCTCGCTGCTCGGGAGGCGGAGCTTAGTAAAT
ACGGAGGGTGCAAGACTGAACGTCACCACTGCGAATACGACGAGCACCAT
AAGACGGTCGATTGCCAGACTCCTGTTTGAGAATGCAGCGTTGAGCACAA
CACCTGCACATACCTAAAGGGCGGAAAGGATCACATTGTCAGTTGTCCTT
CGGCTGCTAATTTGAGGATGCAGCTCACCAGCATTGCCATCATCCTCTTC
GCCGCAATGGGCGCCATTGCCACCCCTATCACGGCCGAGGCGGACAATCT
CGCTGCTCGGGAGGCGGAGCTTAGTAAATACGGAGGG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004635KJC3_004635Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004635-T1KJC3_004635-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004635-T1.cdsKJC3_004635-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004635-T1.utr3p1KJC3_004635-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004635-T1.exon3KJC3_004635-T1.exon3Aspergillus niger KJC3exon
KJC3_004635-T1.exon2KJC3_004635-T1.exon2Aspergillus niger KJC3exon
KJC3_004635-T1.exon1KJC3_004635-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004635-T1.utr5p1KJC3_004635-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
DBxrefInterPro:IPR023112
DBxrefInterPro:IPR022706
DBxrefPFAM:PF11402
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:280622..281258 -
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