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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:282729..283950+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004636-T1 ID=KJC3_004636-T1|Name=KJC3_004636-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1222bp|location=Sequence derived from alignment at ch4:282729..283950+ (Aspergillus niger KJC3)
TTTCTATCTGAAATCTCATTGAATCATCATCCTAATTCCACTTTGTCAAC
TACCGCAATGGACCACCTCCGTGATTCTCTACTGAGCTCTCTGCCGAGAG
ACGGCCCTTCTACTGCAGCGATCGACCACGCTCGCAGAGACCAGGAAGAC
ACACGACAGGCTATCGCTCAGGGCGAAACCCAAGAAGTCCGAGACATAGC
CTTCAGCAACCGGACTTGGGTCGTTACCAGCCGCTACTGCGACATCGGAG
ATGGTGTTGACTCTCTCGAGGGTCACATCCACTCCCTATGGTACATGTAC
TACGAGCTAGGGCGAAACATCTCCTCCGAATCCCCCGAACACGAGGGCTT
AGTCCTCGACATCCTTCGCATTCAAGGAATGGGCCCATTGACTAGACCCG
CACGCGGAGTCAATGGAATCGACATCGCACGAACTGTCGACGGCACACTG
TGGAACGATCTCCCTTTCCTTGTTGGGGATATGACCAACTTCTGGATCAA
CCACAGTGCATCTATGTCGGGGACCCACCGGCTCAACTTTGCTACATTCC
TAGCTAAACTTGCCTCCACGCGTGCTGCCAAGGATAGGATGTGCCAAGTT
GCTCTCTTGATCTTCCGCACTCTGCTTGAAAGCCCTGTGCAACTCCACTC
AGGGAAAGAATCCGATGAGGAGGACGTCAATAGAAGTACTAAGCAGTTGG
AGGTGTTTCATCTGCTACCCTCTGCTGTTGTTTGGCTGAAGACAGCAAAT
CACAACCTCCTTTTGCTATCAGAGGTATATTGGAACGACTGTCCAAGCTA
TATTAGCAAGGCTGGTGAGATGTTCGTTGAATCAGATCTCGGACAGCGAT
CACCTATGGGATTCTCTCCATGGAGATACATGTTCTGGCTGAGGCGACTT
CATGAGATTCGGGATGAAGCTAAGGAGGCGGATGAGAAAGCTTTGGAGGA
GCTTGCTGCTGATGGTATCCAGTATATGGTCAATACGATCAAGGAAAGGA
ATTCGGAGGTCCTTAGGGCTTATAAGAATGGTGGAGATGGTCTGCATAAG
GATAAGTTTCTTTCGTGTCTAAAGGCTCTTGCACGGGTTGAGGAGTAAGA
GTCGTGGATTTGGGATGGAGGGTTGAAGAAGGCTTGGACTCGGAAAACAT
CTTCTCCTTTCTCAGCCTTTCCAGTTCTTCGACGTAATCTCCACCCTCTC
TGCTCCTTATTACCAATACCTG back to topCoding sequence (CDS) from alignment at ch4:282729..283950+ >KJC3_004636-T1 ID=KJC3_004636-T1|Name=KJC3_004636-T1|organism=Aspergillus niger KJC3|type=CDS|length=1041bp|location=Sequence derived from alignment at ch4:282729..283950+ (Aspergillus niger KJC3)
ATGGACCACCTCCGTGATTCTCTACTGAGCTCTCTGCCGAGAGACGGCCC
TTCTACTGCAGCGATCGACCACGCTCGCAGAGACCAGGAAGACACACGAC
AGGCTATCGCTCAGGGCGAAACCCAAGAAGTCCGAGACATAGCCTTCAGC
AACCGGACTTGGGTCGTTACCAGCCGCTACTGCGACATCGGAGATGGTGT
TGACTCTCTCGAGGGTCACATCCACTCCCTATGGTACATGTACTACGAGC
TAGGGCGAAACATCTCCTCCGAATCCCCCGAACACGAGGGCTTAGTCCTC
GACATCCTTCGCATTCAAGGAATGGGCCCATTGACTAGACCCGCACGCGG
AGTCAATGGAATCGACATCGCACGAACTGTCGACGGCACACTGTGGAACG
ATCTCCCTTTCCTTGTTGGGGATATGACCAACTTCTGGATCAACCACAGT
GCATCTATGTCGGGGACCCACCGGCTCAACTTTGCTACATTCCTAGCTAA
ACTTGCCTCCACGCGTGCTGCCAAGGATAGGATGTGCCAAGTTGCTCTCT
TGATCTTCCGCACTCTGCTTGAAAGCCCTGTGCAACTCCACTCAGGGAAA
GAATCCGATGAGGAGGACGTCAATAGAAGTACTAAGCAGTTGGAGGTGTT
TCATCTGCTACCCTCTGCTGTTGTTTGGCTGAAGACAGCAAATCACAACC
TCCTTTTGCTATCAGAGGTATATTGGAACGACTGTCCAAGCTATATTAGC
AAGGCTGGTGAGATGTTCGTTGAATCAGATCTCGGACAGCGATCACCTAT
GGGATTCTCTCCATGGAGATACATGTTCTGGCTGAGGCGACTTCATGAGA
TTCGGGATGAAGCTAAGGAGGCGGATGAGAAAGCTTTGGAGGAGCTTGCT
GCTGATGGTATCCAGTATATGGTCAATACGATCAAGGAAAGGAATTCGGA
GGTCCTTAGGGCTTATAAGAATGGTGGAGATGGTCTGCATAAGGATAAGT
TTCTTTCGTGTCTAAAGGCTCTTGCACGGGTTGAGGAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004636-T1.utr5p1 | KJC3_004636-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004636-T1.utr3p1 | KJC3_004636-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022085 |
| DBxref | PFAM:PF12311 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:282729..283950 + |
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