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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:284639..286914- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004637-T1 ID=KJC3_004637-T1|Name=KJC3_004637-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2276bp|location=Sequence derived from alignment at ch4:284639..286914- (Aspergillus niger KJC3)
AGTCACGACGATCGTCGTCTCCTTTTTGGCTGCTCTGCATGTCTGCAACC
ATCTGGCAATGGGGATTGTGCCCCTCCCACCGGCGTCCGTCTGCCTCCGC
CCAACAACACACTAATGCTGCGTTCTTGACGTCACCAGCTCCAGTCCGGT
TTCCCCCTAGCCTACAGCCTTAACGCACCATTTTTCCTTCTAAAGAGAGC
TGTACACCTTCTCACAACATTCAAAGAATATGGTGTATCAGGATTATGGC
GCGTGATGGCACAATTCATAGTCTACGGACGTGGTGATGTCCAATTGTTC
CCACTGTGTGGCCTATCCGTGATGGGTAGTAGCAGCCGCTTATCAGTGGC
CCAGACTAGCACACGCAATGCAGTCATCTCGGCACTCTGCTAAACGCCGT
GACCCCTGGTATTGTCTGGGGCCTAAAGTCCCCATTCGGTGCTGGACAAT
GTGATGATTTAACGGTAATGATCACTATGCGCGGCACTGTAATAACGTGG
TACGGAGTACTTTTCCTGGTTCCACTGGGGTTCGCCTGTGAGATCCGCAG
ATTGGCGAAGCCTTAGTGGACAAATCACAAGAGTGTCATGAGTCGCGGAG
GCCCATCATGACCCTTGTGTGCGTAGAATCTCTACTTCCGTCATCATGGA
TTTTTTGACATGTTCCACACGTCTGCTTTTATCCTTCCAACCCACTGTAC
ATAGTTGGACCATCTCTCTGCCAGCCCACGAGCTTTTTTTTGGTATCCAC
TCGAGGTCCGGAAGCTCTGTGCATCTTAAATGACATGATGGCACCCCCGG
AGCCGAAACTCTCGACCACGGTTCTCGTTGTGGGCGCAGGTAAGGCTTTG
GTAGTCGCGTGGGACTTTCAACCTCACGATGAAGCCTTGCACCAAGGATC
CGGACACATAACGCTGATTGATTATGATTAGGTTCAACTGGACTTGCTTT
GGCTCAGGGGTTGAAAAAGGTAGTTATAACACCTACTTCTGTATTTCTCC
TAGCTGAACACTTTCCGTTTAGGCTGGGATTCCTACTATTGTGGTAGAAA
AACATGACAGCTTAGATGCACATAACCGTGACTGGAACATGGGCTTGCAC
TGGGGCGCAGGCCCTTTGCAAGCTCTCTTACCAGAAGAGCAATGGTCACG
AATCCAGTCAGTCCAAGTCGATCCTAATGAGCCTACAGCAGAACAAGATG
CTCTCAACTTCCTCAACGGACAGTCCGGAGAGGCCATGGCTTCCATCCCT
GCGCGTCTTTTCTATCGGTTGCGTCGTCGGAAACTCCGAGGCCTGATGGA
ACCAGGCTTAGACATTCGGTATGGCCAAAAGCTACAGGACATTCAGTGTT
CTGCCGACGGCGAACATGCCACTGCCATGTTCGAAGATGGCTCGTCCATT
TCAGCTAGCATTATAGTGGGCGCTGATGGAGCTCGCTCGACGACACGACA
CGTCTTGCTAGGACCTAACAGAGGGGAGGTCCGCCGGCTTCCTTACTGCG
CAACCTTTATCCAGGCCCAATACTCCGCAGAGCGTGCTCGCTACTTACGA
CAGTTCCACCCTCTTTACATCGCTGGAATTAATCCTGCGGGGTATTTCTC
TTTCTTCGGCCTACACGACGCAACAGATCGCGAGAGACCAGACACTTGGA
CTTTCTTCTTCTACATATCATGGCATTCCTCCCTGCAGGAGCAACGGGAG
ACAGCTGGTTGGAGTAACGCACAAAGGCTTGAGCAAGTCAAGAAGTTTGC
CAAGACTTACACTGATCCTTGGAAGAGCGCGTTTGAATGGCTGCCGGATG
ACCAGCAAGTCTGGCACATGGGCCTGAGCGACTTTGACCCACGCGAAAAA
TCCCATAGGTGGGATAACCGAGGGGGGCGGGTCACATTGGCTGGTGATGC
AGCACACGCCATGACATATCAACGTGGTCAGGGCTTGAACCATTCCATTA
CCGACGCAGCCAATTTGGTGGAAGCAGTGCGACGGTTTGTCTCTGGAGAG
GCAACGCGGGCTGACGCTATAAGGGAGTATGAAGATGAGATGATTTCCCG
CGCGGGGAGTGAAGTTGGCCTGTCTACTGTCAACACGGCAATGCTGCATG
ACTGGCACAAGGTGTTACAGTCACCGGTAATGACATCCGGCATGAAACGG
TCAACTGAAATTATAGCCAATTGAAGGCAGTGTTATCACCACTTCCATTG
ACCTATGCACAGCGACAACTTTCCACCGACATCTGACTTAATGATACGCC
TATAATATAATGCAGATATTCATATA back to topCoding sequence (CDS) from alignment at ch4:284639..286914- >KJC3_004637-T1 ID=KJC3_004637-T1|Name=KJC3_004637-T1|organism=Aspergillus niger KJC3|type=CDS|length=3735bp|location=Sequence derived from alignment at ch4:284639..286914- (Aspergillus niger KJC3)
GCTGGGATTCCTACTATTGTGGTAGAAAAACATGACAGCTTAGATGCACA
TAACCGTGACTGGAACATGGGCTTGCACTGGGGCGCAGGCCCTTTGCAAG
CTCTCTTACCAGAAGAGCAATGGTCACGAATCCAGTCAGTCCAAGTCGAT
CCTAATGAGCCTACAGCAGAACAAGATGCTCTCAACTTCCTCAACGGACA
GTCCGGAGAGGCCATGGCTTCCATCCCTGCGCGTCTTTTCTATCGGTTGC
GTCGTCGGAAACTCCGAGGCCTGATGGAACCAGGCTTAGACATTCGGTAT
GGCCAAAAGCTACAGGACATTCAGTGTTCTGCCGACGGCGAACATGCCAC
TGCCATGTTCGAAGATGGCTCGTCCATTTCAGCTAGCATTATAGTGGGCG
CTGATGGAGCTCGCTCGACGACACGACACGTCTTGCTAGGACCTAACAGA
GGGGAGGTCCGCCGGCTTCCTTACTGCGCAACCTTTATCCAGGCCCAATA
CTCCGCAGAGCGTGCTCGCTACTTACGACAGTTCCACCCTCTTTACATCG
CTGGAATTAATCCTGCGGGGTATTTCTCTTTCTTCGGCCTACACGACGCA
ACAGATCGCGAGAGACCAGACACTTGGACTTTCTTCTTCTACATATCATG
GCATTCCTCCCTGCAGGAGCAACGGGAGACAGCTGGTTGGAGTAACGCAC
AAAGGCTTGAGCAAGTCAAGAAGTTTGCCAAGACTTACACTGATCCTTGG
AAGAGCGCGTTTGAATGGCTGCCGGATGACCAGCAAGTCTGGCACATGGG
CCTGAGCGACTTTGACCCACGCGAAAAATCCCATAGGTGGGATAACCGAG
GGGGGCGGGTCACATTGGCTGGTGATGCAGCACACGCCATGACATATCAA
CGTGGTCAGGGCTTGAACCATTCCATTACCGACGCAGCCAATTTGGTGGA
AGCAGTGCGACGGTTTGTCTCTGGAGAGGCAACGCGGGCTGACGCTATAA
GGGAGTATGAAGATGAGATGATTTCCCGCGCGGGGAGTGAAGTTGGCCTG
TCTACTGTCAACACGGCAATGCTGCATGACTGGCACAAGGTGTTACAGTC
ACCGGTAATGACATCCGGCATGAAACGGTCAACTGAAATTATAGCCAATT
GAGTTCAACTGGACTTGCTTTGGCTCAGGGGTTGAAAAAGATGATGGCAC
CCCCGGAGCCGAAACTCTCGACCACGGTTCTCGTTGTGGGCGCAGGCTGG
GATTCCTACTATTGTGGTAGAAAAACATGACAGCTTAGATGCACATAACC
GTGACTGGAACATGGGCTTGCACTGGGGCGCAGGCCCTTTGCAAGCTCTC
TTACCAGAAGAGCAATGGTCACGAATCCAGTCAGTCCAAGTCGATCCTAA
TGAGCCTACAGCAGAACAAGATGCTCTCAACTTCCTCAACGGACAGTCCG
GAGAGGCCATGGCTTCCATCCCTGCGCGTCTTTTCTATCGGTTGCGTCGT
CGGAAACTCCGAGGCCTGATGGAACCAGGCTTAGACATTCGGTATGGCCA
AAAGCTACAGGACATTCAGTGTTCTGCCGACGGCGAACATGCCACTGCCA
TGTTCGAAGATGGCTCGTCCATTTCAGCTAGCATTATAGTGGGCGCTGAT
GGAGCTCGCTCGACGACACGACACGTCTTGCTAGGACCTAACAGAGGGGA
GGTCCGCCGGCTTCCTTACTGCGCAACCTTTATCCAGGCCCAATACTCCG
CAGAGCGTGCTCGCTACTTACGACAGTTCCACCCTCTTTACATCGCTGGA
ATTAATCCTGCGGGGTATTTCTCTTTCTTCGGCCTACACGACGCAACAGA
TCGCGAGAGACCAGACACTTGGACTTTCTTCTTCTACATATCATGGCATT
CCTCCCTGCAGGAGCAACGGGAGACAGCTGGTTGGAGTAACGCACAAAGG
CTTGAGCAAGTCAAGAAGTTTGCCAAGACTTACACTGATCCTTGGAAGAG
CGCGTTTGAATGGCTGCCGGATGACCAGCAAGTCTGGCACATGGGCCTGA
GCGACTTTGACCCACGCGAAAAATCCCATAGGTGGGATAACCGAGGGGGG
CGGGTCACATTGGCTGGTGATGCAGCACACGCCATGACATATCAACGTGG
TCAGGGCTTGAACCATTCCATTACCGACGCAGCCAATTTGGTGGAAGCAG
TGCGACGGTTTGTCTCTGGAGAGGCAACGCGGGCTGACGCTATAAGGGAG
TATGAAGATGAGATGATTTCCCGCGCGGGGAGTGAAGTTGGCCTGTCTAC
TGTCAACACGGCAATGCTGCATGACTGGCACAAGGTGTTACAGTCACCGG
TAATGACATCCGGCATGAAACGGTCAACTGAAATTATAGCCAATTGAGTT
CAACTGGACTTGCTTTGGCTCAGGGGTTGAAAAAGATGATGGCACCCCCG
GAGCCGAAACTCTCGACCACGGTTCTCGTTGTGGGCGCAGGCTGGGATTC
CTACTATTGTGGTAGAAAAACATGACAGCTTAGATGCACATAACCGTGAC
TGGAACATGGGCTTGCACTGGGGCGCAGGCCCTTTGCAAGCTCTCTTACC
AGAAGAGCAATGGTCACGAATCCAGTCAGTCCAAGTCGATCCTAATGAGC
CTACAGCAGAACAAGATGCTCTCAACTTCCTCAACGGACAGTCCGGAGAG
GCCATGGCTTCCATCCCTGCGCGTCTTTTCTATCGGTTGCGTCGTCGGAA
ACTCCGAGGCCTGATGGAACCAGGCTTAGACATTCGGTATGGCCAAAAGC
TACAGGACATTCAGTGTTCTGCCGACGGCGAACATGCCACTGCCATGTTC
GAAGATGGCTCGTCCATTTCAGCTAGCATTATAGTGGGCGCTGATGGAGC
TCGCTCGACGACACGACACGTCTTGCTAGGACCTAACAGAGGGGAGGTCC
GCCGGCTTCCTTACTGCGCAACCTTTATCCAGGCCCAATACTCCGCAGAG
CGTGCTCGCTACTTACGACAGTTCCACCCTCTTTACATCGCTGGAATTAA
TCCTGCGGGGTATTTCTCTTTCTTCGGCCTACACGACGCAACAGATCGCG
AGAGACCAGACACTTGGACTTTCTTCTTCTACATATCATGGCATTCCTCC
CTGCAGGAGCAACGGGAGACAGCTGGTTGGAGTAACGCACAAAGGCTTGA
GCAAGTCAAGAAGTTTGCCAAGACTTACACTGATCCTTGGAAGAGCGCGT
TTGAATGGCTGCCGGATGACCAGCAAGTCTGGCACATGGGCCTGAGCGAC
TTTGACCCACGCGAAAAATCCCATAGGTGGGATAACCGAGGGGGGCGGGT
CACATTGGCTGGTGATGCAGCACACGCCATGACATATCAACGTGGTCAGG
GCTTGAACCATTCCATTACCGACGCAGCCAATTTGGTGGAAGCAGTGCGA
CGGTTTGTCTCTGGAGAGGCAACGCGGGCTGACGCTATAAGGGAGTATGA
AGATGAGATGATTTCCCGCGCGGGGAGTGAAGTTGGCCTGTCTACTGTCA
ACACGGCAATGCTGCATGACTGGCACAAGGTGTTACAGTCACCGGTAATG
ACATCCGGCATGAAACGGTCAACTGAAATTATAGCCAATTGAGTTCAACT
GGACTTGCTTTGGCTCAGGGGTTGAAAAAGATGATGGCACCCCCGGAGCC
GAAACTCTCGACCACGGTTCTCGTTGTGGGCGCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004637-T1.utr3p1 | KJC3_004637-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004637-T1.utr5p1 | KJC3_004637-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR002938 |
| DBxref | PFAM:PF01494 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch4 | supercontig | ch4:284639..286914 - |
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