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KJC3_004662-T2, KJC3_004662-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004662-T2
Unique NameKJC3_004662-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:344782..347882+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004662-T2 ID=KJC3_004662-T2|Name=KJC3_004662-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3101bp|location=Sequence derived from alignment at ch4:344782..347882+ (Aspergillus niger KJC3)
CTCTCAATTGTTTATCTCTGAGCCAGGGTACGACAAGCCTGAAATAAAGT
CGAGACTCAACATTCAATTTCCAACCTGCAGAATACGAGGCAACGGTCAC
CTGACGAAAGAGTAAACGGGAAGCGGTTCTCCACGCCGCCGGGAAGCCGA
TCATCGCCTTCAAGCTCTCCATGGAAAAAGAAAAAAAGGAGACCCATTAA
CGAAATGCCACCACCAGAGCAAAGGGCTTCAACGCCCACCTCTTCGCGAT
TAGCCGCGAAATCTCCACGTGTGCTTGCATGTGTGCTGTGCCAGCAGCGC
AAGGTCAGATGCGACCGCAAGTTCCCCTGCGCCAGCTGCATTCGGGCCGG
CGCGCAGTGTGTGCCCACTCTGGCCCCGCGGCCGCGGCGTCGCAGGTTCC
CCGAACGAGAGCTTTTGGAGCGCCTTCGGAAGTATGAGGATTTGCTGCGC
CAACATAATATACCCTTTGAGCCTTTGCATGCCCCTGCTGGAGAAGACAG
CAGGACCCCGGAGTTTGTAGAACATGCTCGTTCTGAAGAGCGTACTGTTG
GGGAAGAGGGACAGTCAAAGGAGAGCATGACTGTCAAGGCTGAGCCAGTA
TACGCGGCTAAGTTGTGGCTCCCGCAGCAATGCATAGCCTATCCGATTTG
CACTAACAGTTGTTTAGGAATTACTGGAAAGTTCTCAGTTTAGTGGTATG
TGCTCTATATGAGTTAGGCTGAACTATGCTTACAGTGGACGTCAGTCACA
AGATGCTGAGGATGTCGATTTTGATGATAACAGTGAGGATGATCCCAGTC
ACTCGCAGGACACTTTGGGAGGGACTGCCGTGAGAAAGATGTTTGATCAG
GCATACAAGAACAACCACCAGAATTTCATATTTGGATCACATGAAGCCAA
TGTAGATCTATCGACTTTGCATCCTGATCAAGTCCAGATTTTCAAGCTCT
GGCAGATTTACTTGGACAATGTCGACCCTTTGCTCAAAGTCACACATACC
CCGACTCTCCAAGCACGCATATTTGATGCTCTTAGTGATCTGGCTCGTAT
AAGCCCGGAACTGGAAGCGCTCCTTTTCAGTTTGTACAGCGTCGCTATCA
TGAGTCTCGATGACGAAGAGTGCCGAAGCTCGTTCGGGTCTCCGAGGAAA
GAACTTTTGCAAGGATATCAGTTTGGATGTCAGCAAGCCTTGCTTAATTG
TGATGTGTTACGCACCGGGGATCGCGAGTGCTTAACTGCTTTGTTGCTCT
ATCTGGTTAGTCCCTCGAGTAGCCTTTTCTCGTGTGCCTCTAACACTTCT
AGGTGTCTATGAGGTCTGAAACAGATCCGAGATCTCTGTCTTCGGTGCTT
GGAGTTGCCATTCGAATCGCTCAACGCATGAGCATCAATGACGAAAGGAC
AAATGCAAGATACTGCCCACTCGAGCGCGAGATGCGCCGGAGGTTATGGT
GGTCGCTGATAATGTTTGACAACCGCATTGGCGAGATGTCGGATCACAAA
ACTTCAATGTTGATACCAACTTGGGATTGTAGAAGCCCGCTCAATGTGAC
CGATAATGATCTGCAACCGGAGATGAAGGACTCGCCAGCTGCTTATGCGA
GCCCGACTGAAGCATTGTTTATATCTGCGCGCAGTGAACTGGGGGACTTT
CTGCGACACAGCGCCTTTCACCTGGATTATATCAACCCATCTTTGAAGGC
GGTCGCCAGAGACACGAAAGGTGATGGCATGACTGACATAGAAAGGAAGA
TAGAGGACAAATATCTCCGACTCTGCAATCCAGATAATCCCCTTCACTAC
ATGACGATCTGGACGATACGTGGCTTCCTTGCAAAACACCTTCTGCTTGA
ACTCTACTCGAAATTCTCGCCCACGAAGCAATCAGAAACGCAGCGCAACA
CCGCCAGCTCCTACGCAATACGAATCCTCAAGTCTGATACTATGTTGATG
AGATCCCCCCATACAAAACGGTACCGCTGGCACGTTCACATGCACTTCCC
ATTCCCTGCATATCTACATGCCATCCAAGATCTGAAGAAGCGGCCCATGC
AAGCGCATGCTCGTGAAATGTGGAAGACCATGAGCGAAAACGCGGAGTTA
CGTTTCAAAGATATGCATAAATTCCCCCCAGTCTTTGAGAATGTCGCGCG
AAATGTCCTTCAGGCCTGGGAGGCGCATCAAGCAGCATTGGGGGAACATG
GAAAGTCGATAGCGCCACCATGGATTGTGCAGGATGTTAGAACCAAGTTG
AACAATCTGCATTCAGACTCGGGAAATTGCAACGCAGAGCAGCCGAATGA
CACGGAGGGGACCACTTCACTCTCCATGCCCACGGAGCATGATATTCCTA
ATTTGCTATCTGGCATGGAAGGATTTGGCAGCGTAGCTTGTGGGCTTGGT
GGATATTCGGACATATTTGAACAGGCCGTCATGGATGTTGACGCGGATCA
GTCAGGTTGGCCCACGATGAACTTCTACCCGATGTGGTAGAGGAATAGAG
GATATGCTTGTCGTCATTGCGAGTCTCTGTACAGCTGCCACTCCATTGTC
GGTCGAGTGAGATTATATGCGCTAACCAACTGACGAGCAATGGCCACAGG
CCAGACATCGCACAACTCGTCCATACTCAATTCGAAGGCTAACCCCCGTT
TCTATTCATCGATCAATATTGGACACGACGATTTTCTCGCTGTCTTTCTA
AACAGTCGATAGTCAAGACCATGGTCGGCGCTTTTTATCCTCCTGGCTAG
GTTTAGGTTTTGTCGATGCGAGAGGCCCGAGTAGAAGGCAGATTGAGGGG
CCATGCAGAGCAGAAATGTGCAGCTTATTTTTTCATTATACTCGCCCAAA
GTTGCTTCGTTATTGGGCCTATTACAAACCCACTCAATCAGGATGTTTAC
GGGTATCGGCGAAGCTATCGCCTATCTACCCGCTAAGGAAGGGCCACGTT
AGTGCTCTTCGTCAGATCCGAGGTACAGTCGTTGTAGCCAAAGGCAATGC
CTCTTGCACATCATATGCACGTACCCTCCTTCAGACACCAAAATGCAAAA
GTAACGCAGATCTCCAATTTACTATCCGTACAACCATGTCGAGGGCGAAA
T
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Coding sequence (CDS) from alignment at ch4:344782..347882+

>KJC3_004662-T2 ID=KJC3_004662-T2|Name=KJC3_004662-T2|organism=Aspergillus niger KJC3|type=CDS|length=3210bp|location=Sequence derived from alignment at ch4:344782..347882+ (Aspergillus niger KJC3)
ATGTTTGATCAGGCATACAAGAACAACCACCAGAATTTCATATTTGGATC
ACATGAAGCCAATGTAGATCTATCGACTTTGCATCCTGATCAAGTCCAGA
TTTTCAAGCTCTGGCAGATTTACTTGGACAATGTCGACCCTTTGCTCAAA
GTCACACATACCCCGACTCTCCAAGCACGCATATTTGATGCTCTTAGTGA
TCTGGCTCGTATAAGCCCGGAACTGGAAGCGCTCCTTTTCAGTTTGTACA
GCGTCGCTATCATGAGTCTCGATGACGAAGAGTGCCGAAGCTCGTTCGGG
TCTCCGAGGAAAGAACTTTTGCAAGGATATCAGTTTGGATGTCAGCAAGC
CTTGCTTAATTGTGATGTGTTACGCACCGGGGATCGCGAGTGCTTAACTG
CTTTGTTGCTCTATCTGGTGTCTATGAGGTCTGAAACAGATCCGAGATCT
CTGTCTTCGGTGCTTGGAGTTGCCATTCGAATCGCTCAACGCATGAGCAT
CAATGACGAAAGGACAAATGCAAGATACTGCCCACTCGAGCGCGAGATGC
GCCGGAGGTTATGGTGGTCGCTGATAATGTTTGACAACCGCATTGGCGAG
ATGTCGGATCACAAAACTTCAATGTTGATACCAACTTGGGATTGTAGAAG
CCCGCTCAATGTGACCGATAATGATCTGCAACCGGAGATGAAGGACTCGC
CAGCTGCTTATGCGAGCCCGACTGAAGCATTGTTTATATCTGCGCGCAGT
GAACTGGGGGACTTTCTGCGACACAGCGCCTTTCACCTGGATTATATCAA
CCCATCTTTGAAGGCGGTCGCCAGAGACACGAAAGGTGATGGCATGACTG
ACATAGAAAGGAAGATAGAGGACAAATATCTCCGACTCTGCAATCCAGAT
AATCCCCTTCACTACATGACGATCTGGACGATACGTGGCTTCCTTGCAAA
ACACCTTCTGCTTGAACTCTACTCGAAATTCTCGCCCACGAAGCAATCAG
AAACGCAGCGCAACACCGCCAGCTCCTACGCAATACGAATCCTCAAGTCT
GATACTATGTTGATGAGATCCCCCCATACAAAACGGTACCGCTGGCACGT
TCACATGCACTTCCCATTCCCTGCATATCTACATGCCATCCAAGATCTGA
AGAAGCGGCCCATGCAAGCGCATGCTCGTGAAATGTGGAAGACCATGAGC
GAAAACGCGGAGTTACGTTTCAAAGATATGCATAAATTCCCCCCAGTCTT
TGAGAATGTCGCGCGAAATGTCCTTCAGGCCTGGGAGGCGCATCAAGCAG
CATTGGGGGAACATGGAAAGTCGATAGCGCCACCATGGATTGTGCAGGAT
GTTAGAACCAAGTTGAACAATCTGCATTCAGACTCGGGAAATTGCAACGC
AGAGCAGCCGAATGACACGGAGGGGACCACTTCACTCTCCATGCCCACGG
AGCATGATATTCCTAATTTGCTATCTGGCATGGAAGGATTTGGCAGCGTA
GCTTGTGGGCTTGGTGGATATTCGGACATATTTGAACAGGCCGTCATGGA
TGTTGACGCGGATCAGTCAGGTTGGCCCACGATGAACTTCTACCCGATGT
GGTAGATGTTTGATCAGGCATACAAGAACAACCACCAGAATTTCATATTT
GGATCACATGAAGCCAATGTAGATCTATCGACTTTGCATCCTGATCAAGT
CCAGATTTTCAAGCTCTGGCAGATTTACTTGGACAATGTCGACCCTTTGC
TCAAAGTCACACATACCCCGACTCTCCAAGCACGCATATTTGATGCTCTT
AGTGATCTGGCTCGTATAAGCCCGGAACTGGAAGCGCTCCTTTTCAGTTT
GTACAGCGTCGCTATCATGAGTCTCGATGACGAAGAGTGCCGAAGCTCGT
TCGGGTCTCCGAGGAAAGAACTTTTGCAAGGATATCAGTTTGGATGTCAG
CAAGCCTTGCTTAATTGTGATGTGTTACGCACCGGGGATCGCGAGTGCTT
AACTGCTTTGTTGCTCTATCTGGTGTCTATGAGGTCTGAAACAGATCCGA
GATCTCTGTCTTCGGTGCTTGGAGTTGCCATTCGAATCGCTCAACGCATG
AGCATCAATGACGAAAGGACAAATGCAAGATACTGCCCACTCGAGCGCGA
GATGCGCCGGAGGTTATGGTGGTCGCTGATAATGTTTGACAACCGCATTG
GCGAGATGTCGGATCACAAAACTTCAATGTTGATACCAACTTGGGATTGT
AGAAGCCCGCTCAATGTGACCGATAATGATCTGCAACCGGAGATGAAGGA
CTCGCCAGCTGCTTATGCGAGCCCGACTGAAGCATTGTTTATATCTGCGC
GCAGTGAACTGGGGGACTTTCTGCGACACAGCGCCTTTCACCTGGATTAT
ATCAACCCATCTTTGAAGGCGGTCGCCAGAGACACGAAAGGTGATGGCAT
GACTGACATAGAAAGGAAGATAGAGGACAAATATCTCCGACTCTGCAATC
CAGATAATCCCCTTCACTACATGACGATCTGGACGATACGTGGCTTCCTT
GCAAAACACCTTCTGCTTGAACTCTACTCGAAATTCTCGCCCACGAAGCA
ATCAGAAACGCAGCGCAACACCGCCAGCTCCTACGCAATACGAATCCTCA
AGTCTGATACTATGTTGATGAGATCCCCCCATACAAAACGGTACCGCTGG
CACGTTCACATGCACTTCCCATTCCCTGCATATCTACATGCCATCCAAGA
TCTGAAGAAGCGGCCCATGCAAGCGCATGCTCGTGAAATGTGGAAGACCA
TGAGCGAAAACGCGGAGTTACGTTTCAAAGATATGCATAAATTCCCCCCA
GTCTTTGAGAATGTCGCGCGAAATGTCCTTCAGGCCTGGGAGGCGCATCA
AGCAGCATTGGGGGAACATGGAAAGTCGATAGCGCCACCATGGATTGTGC
AGGATGTTAGAACCAAGTTGAACAATCTGCATTCAGACTCGGGAAATTGC
AACGCAGAGCAGCCGAATGACACGGAGGGGACCACTTCACTCTCCATGCC
CACGGAGCATGATATTCCTAATTTGCTATCTGGCATGGAAGGATTTGGCA
GCGTAGCTTGTGGGCTTGGTGGATATTCGGACATATTTGAACAGGCCGTC
ATGGATGTTGACGCGGATCAGTCAGGTTGGCCCACGATGAACTTCTACCC
GATGTGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004662KJC3_004662Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004662-T2KJC3_004662-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004662-T2.utr5p1KJC3_004662-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_004662-T2.utr5p2KJC3_004662-T2.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004662-T2.exon1KJC3_004662-T2.exon1Aspergillus niger KJC3exon
KJC3_004662-T2.exon2KJC3_004662-T2.exon2Aspergillus niger KJC3exon
KJC3_004662-T2.exon3KJC3_004662-T2.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004662-T2.cdsKJC3_004662-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004662-T2.utr3p1KJC3_004662-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007219
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:344782..347882 +
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