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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:350166..352252- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004664-T1 ID=KJC3_004664-T1|Name=KJC3_004664-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2087bp|location=Sequence derived from alignment at ch4:350166..352252- (Aspergillus niger KJC3)
AATGCCGCCATCATCACAATCTACACTGGCACGGACACCTTGCTCTAACT
GTCGCGGTAAGACCCTCAGAGTATAATTCATCTTCTGGAGATATCGTCTA
GTGCTAATCGATCCCAGAGAAACACGTGAGATGTAGGTCTGCTCCTCCCG
AACCCGAATGTTCTAATGTTTGCTTGAGTCAAGTACAGGTGACAAACAAC
AACCGACATGCACACGATGTAAAGAAAAAGGCTTAGTCTGTAGGCCAGTA
CAGAGGAAGTCAGTCTTTCGCCAAGGGTCGACGGCCAGGCTTGATGGGAA
TTTCTCGAAAGATCAATCTTGGATGAGCAGCCAGCCAAAAAAATGGAAGC
TATTCTCAGGAGACTCTTCACTCCCAGAGTCCCTGGATGTGACTCAGAGC
CCAACACCATTCCAGGAGCCTACAGAGCGATGGGAAACGCCAACATCCGA
CAAAATTGATGGTCCTATATGGGCCCAACGTGAGGATCGGACTTCCCCCT
TTGATCCTTCACGGAATGGCTTTCGCACCTTCGTTTTGGAGGACACGACC
AACGTCAACAGATTATCTAATGTTGCAAGCGAGTGGGAATCTGTGAACAA
CTCTGAAAGCAATCGCTCGATCAATGGAATGTCACGGTCAAGGATACTAG
TTCAGACAGATGACGCTTCATCTGCTCTTGAGCCCGGGCAGACCAGCGTG
CAGGAAGCTTGTCTTCTACGCCATTTCATCGAGGAAATATCGCCATGGGT
AAGGCACCAACTACTTGTGATGCCTATTTTACTGAAATATCGTAGTTCGA
TCACTGCGACGACCGCCGACACTTTCAATTAGTAGTACCGCGTCGAGCAC
AATACTGCTCGATCATACGCAACGCTCTATTCGCAGTTTCTGCTCGCCAC
CTAGCTCGCCTCCCGCAGTACGCAACACCCCAAGGAGTTTGCTATCGTGG
ACAGCTTCTTCCCGACCTGGAGAAATGTACAGCCGTAGAATACACGCTCA
AATGCATTCCCGAGCTTCTCAGATTCCCTGAAATAACCGATCCCACTGAA
CAAGAGAATATAATGGTTGCCACAGTTATCTTACGCCAATACGAAGAGAT
GGAAGAGGACATAGAGGACAACAACGATACGATCGCAGACATGTCTACGC
ACGATAGAGTCAACTTCTTAGCCATCACGCAGAGAATTATCGATGCCATG
ATCTCCCACCGGTTGGAGCAGTCTCTTGCCACTGCAGCTTATTGGATAGT
TATACGACAGGAGGTATACTACGCACTGACAAGACAACGGCCGCCCAAAA
TGCGATTCAGTCCAGAAGACTGGGGGAAGGCGTCTGCTGCAAATACTTTG
GTAATGCTCGCTAGTGAAGTGACGAAGTGGCGCTGGGGGGACGGTACGCG
TGAGGAATGGAGTTCGTTCCCTTCCTTACTACCATTTATCCATCTCCTGC
ATCACTAACTCATTCCCCAGACCGCCTCATGCTGCGCCACAGAAAGCTCA
GACATGACTACCATTCCAAACTAGCACCGATATTCGAAAAGAAAGCAGAT
AGATCGCGTGGCGAACTATTCCCTACAATATGGTACAGCTCCGACGAACA
GGTGACTGCAGTGCAGCACCTCGAGATAGCCAATATGATCCTAACCGCTC
AGAATCCATACCTTTCGTACGTCCTACATATCCTATCCCTCCGCTGATCC
CCATGTACTAACCTATCAGAAACTCCACTCGAGCTGCGCATCGCAAAGCG
GAAGCAGAAGTCCGCTCCATCCTGCTCAGGATATGCGGCATTGCAGTGAA
CCACGCCCATTGCCACCCGGCTTTAGTCACTGCCGTGATATCTATTGGTC
TCTACGGGGAGTATTTTACCGAGCTGGACGAGCGCGAGGCGTTGGTTGGT
ATTATCAACCAGACTCGTGATTTGCATTCGTGGCCGATGCAGAAGTGCTA
TGCGCGATTGAGGCGGGGTTGGGAAGAGATAGATAATTGCAGCCCTTGAG
TGGCCATCAGCAACTTGTGTCATATTCCACAATAGATCTGTGATTTTGTA
GATAGGTGTTTTGGACATCAAAGTGCTACTGAAGATG back to topCoding sequence (CDS) from alignment at ch4:350166..352252- >KJC3_004664-T1 ID=KJC3_004664-T1|Name=KJC3_004664-T1|organism=Aspergillus niger KJC3|type=CDS|length=6072bp|location=Sequence derived from alignment at ch4:350166..352252- (Aspergillus niger KJC3)
AAACTCCACTCGAGCTGCGCATCGCAAAGCGGAAGCAGAAGTCCGCTCCA
TCCTGCTCAGGATATGCGGCATTGCAGTGAACCACGCCCATTGCCACCCG
GCTTTAGTCACTGCCGTGATATCTATTGGTCTCTACGGGGAGTATTTTAC
CGAGCTGGACGAGCGCGAGGCGTTGGTTGGTATTATCAACCAGACTCGTG
ATTTGCATTCGTGGCCGATGCAGAAGTGCTATGCGCGATTGAGGCGGGGT
TGGGAAGAGATAGATAATTGCAGCCCTTGAACCGCCTCATGCTGCGCCAC
AGAAAGCTCAGACATGACTACCATTCCAAACTAGCACCGATATTCGAAAA
GAAAGCAGATAGATCGCGTGGCGAACTATTCCCTACAATATGGTACAGCT
CCGACGAACAGGTGACTGCAGTGCAGCACCTCGAGATAGCCAATATGATC
CTAACCGCTCAGAATCCATACCTTTCTTCGATCACTGCGACGACCGCCGA
CACTTTCAATTAGTAGTACCGCGTCGAGCACAATACTGCTCGATCATACG
CAACGCTCTATTCGCAGTTTCTGCTCGCCACCTAGCTCGCCTCCCGCAGT
ACGCAACACCCCAAGGAGTTTGCTATCGTGGACAGCTTCTTCCCGACCTG
GAGAAATGTACAGCCGTAGAATACACGCTCAAATGCATTCCCGAGCTTCT
CAGATTCCCTGAAATAACCGATCCCACTGAACAAGAGAATATAATGGTTG
CCACAGTTATCTTACGCCAATACGAAGAGATGGAAGAGGACATAGAGGAC
AACAACGATACGATCGCAGACATGTCTACGCACGATAGAGTCAACTTCTT
AGCCATCACGCAGAGAATTATCGATGCCATGATCTCCCACCGGTTGGAGC
AGTCTCTTGCCACTGCAGCTTATTGGATAGTTATACGACAGGAGGTATAC
TACGCACTGACAAGACAACGGCCGCCCAAAATGCGATTCAGTCCAGAAGA
CTGGGGGAAGGCGTCTGCTGCAAATACTTTGGTAATGCTCGCTAGTGAAG
TGACGAAGTGGCGCTGGGGGGACGGTACGCGTGAGGAATGGAATGAGCAG
CCAGCCAAAAAAATGGAAGCTATTCTCAGGAGACTCTTCACTCCCAGAGT
CCCTGGATGTGACTCAGAGCCCAACACCATTCCAGGAGCCTACAGAGCGA
TGGGAAACGCCAACATCCGACAAAATTGATGGTCCTATATGGGCCCAACG
TGAGGATCGGACTTCCCCCTTTGATCCTTCACGGAATGGCTTTCGCACCT
TCGTTTTGGAGGACACGACCAACGTCAACAGATTATCTAATGTTGCAAGC
GAGTGGGAATCTGTGAACAACTCTGAAAGCAATCGCTCGATCAATGGAAT
GTCACGGTCAAGGATACTAGTTCAGACAGATGACGCTTCATCTGCTCTTG
AGCCCGGGCAGACCAGCGTGCAGGAAGCTTGTCTTCTACGCCATTTCATC
GAGGAAATATCGCCATGGAAACTCCACTCGAGCTGCGCATCGCAAAGCGG
AAGCAGAAGTCCGCTCCATCCTGCTCAGGATATGCGGCATTGCAGTGAAC
CACGCCCATTGCCACCCGGCTTTAGTCACTGCCGTGATATCTATTGGTCT
CTACGGGGAGTATTTTACCGAGCTGGACGAGCGCGAGGCGTTGGTTGGTA
TTATCAACCAGACTCGTGATTTGCATTCGTGGCCGATGCAGAAGTGCTAT
GCGCGATTGAGGCGGGGTTGGGAAGAGATAGATAATTGCAGCCCTTGAAC
CGCCTCATGCTGCGCCACAGAAAGCTCAGACATGACTACCATTCCAAACT
AGCACCGATATTCGAAAAGAAAGCAGATAGATCGCGTGGCGAACTATTCC
CTACAATATGGTACAGCTCCGACGAACAGGTGACTGCAGTGCAGCACCTC
GAGATAGCCAATATGATCCTAACCGCTCAGAATCCATACCTTTCTTCGAT
CACTGCGACGACCGCCGACACTTTCAATTAGTAGTACCGCGTCGAGCACA
ATACTGCTCGATCATACGCAACGCTCTATTCGCAGTTTCTGCTCGCCACC
TAGCTCGCCTCCCGCAGTACGCAACACCCCAAGGAGTTTGCTATCGTGGA
CAGCTTCTTCCCGACCTGGAGAAATGTACAGCCGTAGAATACACGCTCAA
ATGCATTCCCGAGCTTCTCAGATTCCCTGAAATAACCGATCCCACTGAAC
AAGAGAATATAATGGTTGCCACAGTTATCTTACGCCAATACGAAGAGATG
GAAGAGGACATAGAGGACAACAACGATACGATCGCAGACATGTCTACGCA
CGATAGAGTCAACTTCTTAGCCATCACGCAGAGAATTATCGATGCCATGA
TCTCCCACCGGTTGGAGCAGTCTCTTGCCACTGCAGCTTATTGGATAGTT
ATACGACAGGAGGTATACTACGCACTGACAAGACAACGGCCGCCCAAAAT
GCGATTCAGTCCAGAAGACTGGGGGAAGGCGTCTGCTGCAAATACTTTGG
TAATGCTCGCTAGTGAAGTGACGAAGTGGCGCTGGGGGGACGGTACGCGT
GAGGAATGGAATGAGCAGCCAGCCAAAAAAATGGAAGCTATTCTCAGGAG
ACTCTTCACTCCCAGAGTCCCTGGATGTGACTCAGAGCCCAACACCATTC
CAGGAGCCTACAGAGCGATGGGAAACGCCAACATCCGACAAAATTGATGG
TCCTATATGGGCCCAACGTGAGGATCGGACTTCCCCCTTTGATCCTTCAC
GGAATGGCTTTCGCACCTTCGTTTTGGAGGACACGACCAACGTCAACAGA
TTATCTAATGTTGCAAGCGAGTGGGAATCTGTGAACAACTCTGAAAGCAA
TCGCTCGATCAATGGAATGTCACGGTCAAGGATACTAGTTCAGACAGATG
ACGCTTCATCTGCTCTTGAGCCCGGGCAGACCAGCGTGCAGGAAGCTTGT
CTTCTACGCCATTTCATCGAGGAAATATCGCCATGGAAACTCCACTCGAG
CTGCGCATCGCAAAGCGGAAGCAGAAGTCCGCTCCATCCTGCTCAGGATA
TGCGGCATTGCAGTGAACCACGCCCATTGCCACCCGGCTTTAGTCACTGC
CGTGATATCTATTGGTCTCTACGGGGAGTATTTTACCGAGCTGGACGAGC
GCGAGGCGTTGGTTGGTATTATCAACCAGACTCGTGATTTGCATTCGTGG
CCGATGCAGAAGTGCTATGCGCGATTGAGGCGGGGTTGGGAAGAGATAGA
TAATTGCAGCCCTTGAACCGCCTCATGCTGCGCCACAGAAAGCTCAGACA
TGACTACCATTCCAAACTAGCACCGATATTCGAAAAGAAAGCAGATAGAT
CGCGTGGCGAACTATTCCCTACAATATGGTACAGCTCCGACGAACAGGTG
ACTGCAGTGCAGCACCTCGAGATAGCCAATATGATCCTAACCGCTCAGAA
TCCATACCTTTCTTCGATCACTGCGACGACCGCCGACACTTTCAATTAGT
AGTACCGCGTCGAGCACAATACTGCTCGATCATACGCAACGCTCTATTCG
CAGTTTCTGCTCGCCACCTAGCTCGCCTCCCGCAGTACGCAACACCCCAA
GGAGTTTGCTATCGTGGACAGCTTCTTCCCGACCTGGAGAAATGTACAGC
CGTAGAATACACGCTCAAATGCATTCCCGAGCTTCTCAGATTCCCTGAAA
TAACCGATCCCACTGAACAAGAGAATATAATGGTTGCCACAGTTATCTTA
CGCCAATACGAAGAGATGGAAGAGGACATAGAGGACAACAACGATACGAT
CGCAGACATGTCTACGCACGATAGAGTCAACTTCTTAGCCATCACGCAGA
GAATTATCGATGCCATGATCTCCCACCGGTTGGAGCAGTCTCTTGCCACT
GCAGCTTATTGGATAGTTATACGACAGGAGGTATACTACGCACTGACAAG
ACAACGGCCGCCCAAAATGCGATTCAGTCCAGAAGACTGGGGGAAGGCGT
CTGCTGCAAATACTTTGGTAATGCTCGCTAGTGAAGTGACGAAGTGGCGC
TGGGGGGACGGTACGCGTGAGGAATGGAATGAGCAGCCAGCCAAAAAAAT
GGAAGCTATTCTCAGGAGACTCTTCACTCCCAGAGTCCCTGGATGTGACT
CAGAGCCCAACACCATTCCAGGAGCCTACAGAGCGATGGGAAACGCCAAC
ATCCGACAAAATTGATGGTCCTATATGGGCCCAACGTGAGGATCGGACTT
CCCCCTTTGATCCTTCACGGAATGGCTTTCGCACCTTCGTTTTGGAGGAC
ACGACCAACGTCAACAGATTATCTAATGTTGCAAGCGAGTGGGAATCTGT
GAACAACTCTGAAAGCAATCGCTCGATCAATGGAATGTCACGGTCAAGGA
TACTAGTTCAGACAGATGACGCTTCATCTGCTCTTGAGCCCGGGCAGACC
AGCGTGCAGGAAGCTTGTCTTCTACGCCATTTCATCGAGGAAATATCGCC
ATGGAAACTCCACTCGAGCTGCGCATCGCAAAGCGGAAGCAGAAGTCCGC
TCCATCCTGCTCAGGATATGCGGCATTGCAGTGAACCACGCCCATTGCCA
CCCGGCTTTAGTCACTGCCGTGATATCTATTGGTCTCTACGGGGAGTATT
TTACCGAGCTGGACGAGCGCGAGGCGTTGGTTGGTATTATCAACCAGACT
CGTGATTTGCATTCGTGGCCGATGCAGAAGTGCTATGCGCGATTGAGGCG
GGGTTGGGAAGAGATAGATAATTGCAGCCCTTGAACCGCCTCATGCTGCG
CCACAGAAAGCTCAGACATGACTACCATTCCAAACTAGCACCGATATTCG
AAAAGAAAGCAGATAGATCGCGTGGCGAACTATTCCCTACAATATGGTAC
AGCTCCGACGAACAGGTGACTGCAGTGCAGCACCTCGAGATAGCCAATAT
GATCCTAACCGCTCAGAATCCATACCTTTCTTCGATCACTGCGACGACCG
CCGACACTTTCAATTAGTAGTACCGCGTCGAGCACAATACTGCTCGATCA
TACGCAACGCTCTATTCGCAGTTTCTGCTCGCCACCTAGCTCGCCTCCCG
CAGTACGCAACACCCCAAGGAGTTTGCTATCGTGGACAGCTTCTTCCCGA
CCTGGAGAAATGTACAGCCGTAGAATACACGCTCAAATGCATTCCCGAGC
TTCTCAGATTCCCTGAAATAACCGATCCCACTGAACAAGAGAATATAATG
GTTGCCACAGTTATCTTACGCCAATACGAAGAGATGGAAGAGGACATAGA
GGACAACAACGATACGATCGCAGACATGTCTACGCACGATAGAGTCAACT
TCTTAGCCATCACGCAGAGAATTATCGATGCCATGATCTCCCACCGGTTG
GAGCAGTCTCTTGCCACTGCAGCTTATTGGATAGTTATACGACAGGAGGT
ATACTACGCACTGACAAGACAACGGCCGCCCAAAATGCGATTCAGTCCAG
AAGACTGGGGGAAGGCGTCTGCTGCAAATACTTTGGTAATGCTCGCTAGT
GAAGTGACGAAGTGGCGCTGGGGGGACGGTACGCGTGAGGAATGGAATGA
GCAGCCAGCCAAAAAAATGGAAGCTATTCTCAGGAGACTCTTCACTCCCA
GAGTCCCTGGATGTGACTCAGAGCCCAACACCATTCCAGGAGCCTACAGA
GCGATGGGAAACGCCAACATCCGACAAAATTGATGGTCCTATATGGGCCC
AACGTGAGGATCGGACTTCCCCCTTTGATCCTTCACGGAATGGCTTTCGC
ACCTTCGTTTTGGAGGACACGACCAACGTCAACAGATTATCTAATGTTGC
AAGCGAGTGGGAATCTGTGAACAACTCTGAAAGCAATCGCTCGATCAATG
GAATGTCACGGTCAAGGATACTAGTTCAGACAGATGACGCTTCATCTGCT
CTTGAGCCCGGGCAGACCAGCGTGCAGGAAGCTTGTCTTCTACGCCATTT
CATCGAGGAAATATCGCCATGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004664-T1.utr3p1 | KJC3_004664-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:350166..352252 - |
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