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KJC3_004675-T1, KJC3_004675-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004675-T1
Unique NameKJC3_004675-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:371600..372834+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004675-T1 ID=KJC3_004675-T1|Name=KJC3_004675-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1235bp|location=Sequence derived from alignment at ch4:371600..372834+ (Aspergillus niger KJC3)
ATTCAACAACTCATGACTGACTACTTCATAAAAGCTCCTTCCTCCCCTCG
TAAAACATGGATTCCTCTACGTCCGAATTTACCCTCCCACTTCACAATAA
GCTCGCCATCGTCACGGGCGCATCCCGCGGCATCGGAGCCAGCATCGCAT
GGGAACTTGCACGTCGTGGCGCAAATGTAAGCCACTGCATATACACAATC
TTCTCTCTCCCTTAAAATTGCTAAAACATCCTAGGTCTGTATGACCTACG
TCTCTCCCACCAGCGCCCAAGCCATGACCGACCTCCGCACAAAAATCACC
CAACTTCCCCACGCTCCTAGAACATGGACCATCCAAGCCGACCTCTCCAC
ACCCACCGGCGCCTCGGATCTAATTTCCCAACTCAAAACCCAAACCGCCC
CCACTCCCCTCAAAATCAACATCCTAGTCAACAACGCTGGCATCGAAATC
GTTAACCACCTTACCGAAACCACCATAGAAAACTACGACAAAGTCTTCAA
CCTCAACGTCCGCGGTACCCTGCTCATGACGCAGGCCGTGCTGCCGTATC
TCCCACCCGAGGGTCATGGCCGGATAATCAACTTGAGTTCGGTTGGTGCG
CGGTACGGTTTCAAGGGGATAAGTCTGTATATTGCGTCCAAGGCGGCGAT
TGAGGGATTCACGCGCGCCTGGGCGGCGGAGTTGGGTGGAAATGGGACAA
CGGTTAACGCTGTGGCGCCGGGGCCGGTGCCGAGTGACCTGCTGGATAGG
ATTCCGAAGGAGATTGTGGAGGCGCAGAAGGCTACCACGCCGGTGGAGCA
GAGGTTGGGGTCCGTGGGGGAAATTGGTAGTGTGGTGGCTTGGTTGGCGG
GGAGGGATGCTTCGTGGGTTACTGGGCAGGTTATTTGTGCGAGTGGGGGG
TGGGCGATGTATTAATTTGTGGTGTGCAGAGGGGGTTGTTGGTCAGGCTA
AGTTTCATTGAATTTTTGATGGTAGAGAAAGCTGTGATTTATTGCTGGTA
GTCACATTTGCCGTCCAACATACTCGTTTCGCGCCTGCCAAATTTGGCTA
TGTTCAAGGCAGGTGACTTGCATTGCAGGACAAACTACTATACTACAAGT
TCCTTGCTGTCGCTACCGCCTCACAACCATCCTACTTCACAATATCTTCT
GCATTACGCTAGATGGTCTGTCAGTCTACACGATGTAGAGGTGAATAAAC
AGAGAAACTGAAAGGGCCTCGGTCCGATAACCTGC
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Coding sequence (CDS) from alignment at ch4:371600..372834+

>KJC3_004675-T1 ID=KJC3_004675-T1|Name=KJC3_004675-T1|organism=Aspergillus niger KJC3|type=CDS|length=1602bp|location=Sequence derived from alignment at ch4:371600..372834+ (Aspergillus niger KJC3)
ATGGATTCCTCTACGTCCGAATTTACCCTCCCACTTCACAATAAGCTCGC
CATCGTCACGGGCGCATCCCGCGGCATCGGAGCCAGCATCGCATGGGAAC
TTGCACGTCGTGGCGCAAATGTCTGTATGACCTACGTCTCTCCCACCAGC
GCCCAAGCCATGACCGACCTCCGCACAAAAATCACCCAACTTCCCCACGC
TCCTAGAACATGGACCATCCAAGCCGACCTCTCCACACCCACCGGCGCCT
CGGATCTAATTTCCCAACTCAAAACCCAAACCGCCCCCACTCCCCTCAAA
ATCAACATCCTAGTCAACAACGCTGGCATCGAAATCGTTAACCACCTTAC
CGAAACCACCATAGAAAACTACGACAAAGTCTTCAACCTCAACGTCCGCG
GTACCCTGCTCATGACGCAGGCCGTGCTGCCGTATCTCCCACCCGAGGGT
CATGGCCGGATAATCAACTTGAGTTCGGTTGGTGCGCGGTACGGTTTCAA
GGGGATAAGTCTGTATATTGCGTCCAAGGCGGCGATTGAGGGATTCACGC
GCGCCTGGGCGGCGGAGTTGGGTGGAAATGGGACAACGGTTAACGCTGTG
GCGCCGGGGCCGGTGCCGAGTGACCTGCTGGATAGGATTCCGAAGGAGAT
TGTGGAGGCGCAGAAGGCTACCACGCCGGTGGAGCAGAGGTTGGGGTCCG
TGGGGGAAATTGGTAGTGTGGTGGCTTGGTTGGCGGGGAGGGATGCTTCG
TGGGTTACTGGGCAGGTTATTTGTGCGAGTGGGGGGTGGGCGATGTATTA
AATGGATTCCTCTACGTCCGAATTTACCCTCCCACTTCACAATAAGCTCG
CCATCGTCACGGGCGCATCCCGCGGCATCGGAGCCAGCATCGCATGGGAA
CTTGCACGTCGTGGCGCAAATGTCTGTATGACCTACGTCTCTCCCACCAG
CGCCCAAGCCATGACCGACCTCCGCACAAAAATCACCCAACTTCCCCACG
CTCCTAGAACATGGACCATCCAAGCCGACCTCTCCACACCCACCGGCGCC
TCGGATCTAATTTCCCAACTCAAAACCCAAACCGCCCCCACTCCCCTCAA
AATCAACATCCTAGTCAACAACGCTGGCATCGAAATCGTTAACCACCTTA
CCGAAACCACCATAGAAAACTACGACAAAGTCTTCAACCTCAACGTCCGC
GGTACCCTGCTCATGACGCAGGCCGTGCTGCCGTATCTCCCACCCGAGGG
TCATGGCCGGATAATCAACTTGAGTTCGGTTGGTGCGCGGTACGGTTTCA
AGGGGATAAGTCTGTATATTGCGTCCAAGGCGGCGATTGAGGGATTCACG
CGCGCCTGGGCGGCGGAGTTGGGTGGAAATGGGACAACGGTTAACGCTGT
GGCGCCGGGGCCGGTGCCGAGTGACCTGCTGGATAGGATTCCGAAGGAGA
TTGTGGAGGCGCAGAAGGCTACCACGCCGGTGGAGCAGAGGTTGGGGTCC
GTGGGGGAAATTGGTAGTGTGGTGGCTTGGTTGGCGGGGAGGGATGCTTC
GTGGGTTACTGGGCAGGTTATTTGTGCGAGTGGGGGGTGGGCGATGTATT
AA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004675KJC3_004675Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004675-T1.utr5p1KJC3_004675-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004675-T1.exon1KJC3_004675-T1.exon1Aspergillus niger KJC3exon
KJC3_004675-T1.exon2KJC3_004675-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004675-T1.cdsKJC3_004675-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004675-T1.utr3p1KJC3_004675-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004675-T1KJC3_004675-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:371600..372834 +
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