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KJC3_004681-T1, KJC3_004681-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004681-T1
Unique NameKJC3_004681-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:393064..394773-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004681-T1 ID=KJC3_004681-T1|Name=KJC3_004681-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1710bp|location=Sequence derived from alignment at ch4:393064..394773- (Aspergillus niger KJC3)
GTGGCAGCTGCCTGTCGACATCTGCAGAGCAACATGACAGCCTCCGCAGA
GCGCTCGACCGCCAAGGGATGGAGATCTTCCAGCCAGTTCATCATCGGGA
CCGCGTGCCTGGCCATGTTTACTGGTACGAAGACACACCTGCTTACTGCC
GCTAACAACTTTCCACATCCTCTAATCATACCAATAAACAGAGTCGCTTT
TAGCCGGTTTCCCCGTGCCGATGCTCCCGTATATGCTAGAAGAGCGCCTT
CACAACGACCCCTCCCAAACCACTGCTACCACCAACAGCCTGCTCAGTCT
ACACGGTCTGGCGTCAATAATAGCTGCCCCTTCTTGCGCGGCTTTGTTCG
ACACTATCTCAAACCAGAAAATCCCGCTTTATCTGGCACTTGTGCTTTGC
CTGGTTGGGACTGCGCTGTTTGCAATCACCACCACATGTATTCGTCACCC
CTAGCCGCACTTTCTTGCTGCTACGAATGCTGATAGTGTTTATGGCCCAG
CATGGGTGCTATACCTGGGCAGGATTCTGCAGGCAGTTGCTGGCTCGGCT
GCATGGCTCGCGTGTACGACCATGCTCACCGAGCTCGCAGGTAGTGCAGG
AGCTGGGACAATGTTGGGACTGAGCATGTCTTCTGCAACTTTGGGAACGG
TGAGCGGACCAATGCTTGGAGGCGTTCTGTTGGGCTGGTTCGGATACTGG
CCAGCTTGGTCTCTACCAATGGTTCTACTAATTCTCGACATGATTGCGCG
CTTTGTTCTGATTCAACCCGACCATCTTTTACTGGATTCACCGTCTCTAA
TCAGACATGCCGAGCGCAGCAAGCTATGTCATGAAATGGAGGAAACTGTG
ACGGAAACGTCCCCTTTCCTGCCACAATCGCCTTCATTTGGCTCAGATAC
CGCAGCGGAGGAAAAGTCTGACAACGCTGCGACTACGAAATATCGCAATT
ACTATACAGTAATGCTCCAAGATGCTGGAATGTGGGCAGGCGTTCTGAAT
ACGATGTCCCAAGCTGCACTACGGGCGGCATTCAACGCTACCTTGCCCGT
GTATCTTCGGGATACCTTTAATTGGGGCCCATCATCAGTCGGGGCGATTT
TCTTTGCCCTCCAAGTCCCTATAATCTTGTTCTCTCCCCTTATTGGCCAC
CTCCGAGATCGTGTCGGTACACGATACCCAACGGCGGTCGGTTGGGCTCT
TCTTTGCCCTCTGATGTGCTACTTGGGCATACCTGGCAGAGACGTCTCTC
AGGCTAGTGGGAGCCGGACAGGTGAAGAGGTCGCTTTTATTGCGTGCATA
TGTGGTATAGGCTTAGTGATGCCATCGGTTCAAGGTGCCGGATCATTTCA
CATGCGCTGTAAGTTACATTACTTCGATTTTTTATATCACGCGGGAAATT
CGATTTGAAGGTTTAATACTAAAAGTGAATAGTCCTCCTGGAGGAAGTTG
AAAAAGATGCTCCCACCATGTTTGGCCCCAATGGTGGGCGTGCGAGGTGC
TTCGCATTGGTGTCTATCTCGTTTAACCTCGGTCTGATGCTGGGTCCATT
TGTTATTGGATGGCTGTTTGAGCAAGTGGGATACTATTATATGAATATCG
CTCTCGGTAGGTCATGGCACGAATCATGTTCCATATGTGCGGCTCTAATA
GTATGTACTCTAGGTGCTGCTTGCATGGGGGTGGCGGGGGTGACGTTTAT
ATTCTGTTGA
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Coding sequence (CDS) from alignment at ch4:393064..394773-

>KJC3_004681-T1 ID=KJC3_004681-T1|Name=KJC3_004681-T1|organism=Aspergillus niger KJC3|type=CDS|length=7080bp|location=Sequence derived from alignment at ch4:393064..394773- (Aspergillus niger KJC3)
GTGCTGCTTGCATGGGGGTGGCGGGGGTGACGTTTATATTCTGTTGATCC
TCCTGGAGGAAGTTGAAAAAGATGCTCCCACCATGTTTGGCCCCAATGGT
GGGCGTGCGAGGTGCTTCGCATTGGTGTCTATCTCGTTTAACCTCGGTCT
GATGCTGGGTCCATTTGTTATTGGATGGCTGTTTGAGCAAGTGGGATACT
ATTATATGAATATCGCTCTCGCATGGGTGCTATACCTGGGCAGGATTCTG
CAGGCAGTTGCTGGCTCGGCTGCATGGCTCGCGTGTACGACCATGCTCAC
CGAGCTCGCAGGTAGTGCAGGAGCTGGGACAATGTTGGGACTGAGCATGT
CTTCTGCAACTTTGGGAACGGTGAGCGGACCAATGCTTGGAGGCGTTCTG
TTGGGCTGGTTCGGATACTGGCCAGCTTGGTCTCTACCAATGGTTCTACT
AATTCTCGACATGATTGCGCGCTTTGTTCTGATTCAACCCGACCATCTTT
TACTGGATTCACCGTCTCTAATCAGACATGCCGAGCGCAGCAAGCTATGT
CATGAAATGGAGGAAACTGTGACGGAAACGTCCCCTTTCCTGCCACAATC
GCCTTCATTTGGCTCAGATACCGCAGCGGAGGAAAAGTCTGACAACGCTG
CGACTACGAAATATCGCAATTACTATACAGTAATGCTCCAAGATGCTGGA
ATGTGGGCAGGCGTTCTGAATACGATGTCCCAAGCTGCACTACGGGCGGC
ATTCAACGCTACCTTGCCCGTGTATCTTCGGGATACCTTTAATTGGGGCC
CATCATCAGTCGGGGCGATTTTCTTTGCCCTCCAAGTCCCTATAATCTTG
TTCTCTCCCCTTATTGGCCACCTCCGAGATCGTGTCGGTACACGATACCC
AACGGCGGTCGGTTGGGCTCTTCTTTGCCCTCTGATGTGCTACTTGGGCA
TACCTGGCAGAGACGTCTCTCAGGCTAGTGGGAGCCGGACAGGTGAAGAG
GTCGCTTTTATTGCGTGCATATGTGGTATAGGCTTAGTGATGCCATCGGT
TCAAGGTGCCGGATCATTTCACATGCGCTAGTCGCTTTTAGCCGGTTTCC
CCGTGCCGATGCTCCCGTATATGCTAGAAGAGCGCCTTCACAACGACCCC
TCCCAAACCACTGCTACCACCAACAGCCTGCTCAGTCTACACGGTCTGGC
GTCAATAATAGCTGCCCCTTCTTGCGCGGCTTTGTTCGACACTATCTCAA
ACCAGAAAATCCCGCTTTATCTGGCACTTGTGCTTTGCCTGGTTGGGACT
GCGCTGTTTGCAATCACCACCACATATGACAGCCTCCGCAGAGCGCTCGA
CCGCCAAGGGATGGAGATCTTCCAGCCAGTTCATCATCGGGACCGCGTGC
CTGGCCATGTTTACTGGTGCTGCTTGCATGGGGGTGGCGGGGGTGACGTT
TATATTCTGTTGATCCTCCTGGAGGAAGTTGAAAAAGATGCTCCCACCAT
GTTTGGCCCCAATGGTGGGCGTGCGAGGTGCTTCGCATTGGTGTCTATCT
CGTTTAACCTCGGTCTGATGCTGGGTCCATTTGTTATTGGATGGCTGTTT
GAGCAAGTGGGATACTATTATATGAATATCGCTCTCGCATGGGTGCTATA
CCTGGGCAGGATTCTGCAGGCAGTTGCTGGCTCGGCTGCATGGCTCGCGT
GTACGACCATGCTCACCGAGCTCGCAGGTAGTGCAGGAGCTGGGACAATG
TTGGGACTGAGCATGTCTTCTGCAACTTTGGGAACGGTGAGCGGACCAAT
GCTTGGAGGCGTTCTGTTGGGCTGGTTCGGATACTGGCCAGCTTGGTCTC
TACCAATGGTTCTACTAATTCTCGACATGATTGCGCGCTTTGTTCTGATT
CAACCCGACCATCTTTTACTGGATTCACCGTCTCTAATCAGACATGCCGA
GCGCAGCAAGCTATGTCATGAAATGGAGGAAACTGTGACGGAAACGTCCC
CTTTCCTGCCACAATCGCCTTCATTTGGCTCAGATACCGCAGCGGAGGAA
AAGTCTGACAACGCTGCGACTACGAAATATCGCAATTACTATACAGTAAT
GCTCCAAGATGCTGGAATGTGGGCAGGCGTTCTGAATACGATGTCCCAAG
CTGCACTACGGGCGGCATTCAACGCTACCTTGCCCGTGTATCTTCGGGAT
ACCTTTAATTGGGGCCCATCATCAGTCGGGGCGATTTTCTTTGCCCTCCA
AGTCCCTATAATCTTGTTCTCTCCCCTTATTGGCCACCTCCGAGATCGTG
TCGGTACACGATACCCAACGGCGGTCGGTTGGGCTCTTCTTTGCCCTCTG
ATGTGCTACTTGGGCATACCTGGCAGAGACGTCTCTCAGGCTAGTGGGAG
CCGGACAGGTGAAGAGGTCGCTTTTATTGCGTGCATATGTGGTATAGGCT
TAGTGATGCCATCGGTTCAAGGTGCCGGATCATTTCACATGCGCTAGTCG
CTTTTAGCCGGTTTCCCCGTGCCGATGCTCCCGTATATGCTAGAAGAGCG
CCTTCACAACGACCCCTCCCAAACCACTGCTACCACCAACAGCCTGCTCA
GTCTACACGGTCTGGCGTCAATAATAGCTGCCCCTTCTTGCGCGGCTTTG
TTCGACACTATCTCAAACCAGAAAATCCCGCTTTATCTGGCACTTGTGCT
TTGCCTGGTTGGGACTGCGCTGTTTGCAATCACCACCACATATGACAGCC
TCCGCAGAGCGCTCGACCGCCAAGGGATGGAGATCTTCCAGCCAGTTCAT
CATCGGGACCGCGTGCCTGGCCATGTTTACTGGTGCTGCTTGCATGGGGG
TGGCGGGGGTGACGTTTATATTCTGTTGATCCTCCTGGAGGAAGTTGAAA
AAGATGCTCCCACCATGTTTGGCCCCAATGGTGGGCGTGCGAGGTGCTTC
GCATTGGTGTCTATCTCGTTTAACCTCGGTCTGATGCTGGGTCCATTTGT
TATTGGATGGCTGTTTGAGCAAGTGGGATACTATTATATGAATATCGCTC
TCGCATGGGTGCTATACCTGGGCAGGATTCTGCAGGCAGTTGCTGGCTCG
GCTGCATGGCTCGCGTGTACGACCATGCTCACCGAGCTCGCAGGTAGTGC
AGGAGCTGGGACAATGTTGGGACTGAGCATGTCTTCTGCAACTTTGGGAA
CGGTGAGCGGACCAATGCTTGGAGGCGTTCTGTTGGGCTGGTTCGGATAC
TGGCCAGCTTGGTCTCTACCAATGGTTCTACTAATTCTCGACATGATTGC
GCGCTTTGTTCTGATTCAACCCGACCATCTTTTACTGGATTCACCGTCTC
TAATCAGACATGCCGAGCGCAGCAAGCTATGTCATGAAATGGAGGAAACT
GTGACGGAAACGTCCCCTTTCCTGCCACAATCGCCTTCATTTGGCTCAGA
TACCGCAGCGGAGGAAAAGTCTGACAACGCTGCGACTACGAAATATCGCA
ATTACTATACAGTAATGCTCCAAGATGCTGGAATGTGGGCAGGCGTTCTG
AATACGATGTCCCAAGCTGCACTACGGGCGGCATTCAACGCTACCTTGCC
CGTGTATCTTCGGGATACCTTTAATTGGGGCCCATCATCAGTCGGGGCGA
TTTTCTTTGCCCTCCAAGTCCCTATAATCTTGTTCTCTCCCCTTATTGGC
CACCTCCGAGATCGTGTCGGTACACGATACCCAACGGCGGTCGGTTGGGC
TCTTCTTTGCCCTCTGATGTGCTACTTGGGCATACCTGGCAGAGACGTCT
CTCAGGCTAGTGGGAGCCGGACAGGTGAAGAGGTCGCTTTTATTGCGTGC
ATATGTGGTATAGGCTTAGTGATGCCATCGGTTCAAGGTGCCGGATCATT
TCACATGCGCTAGTCGCTTTTAGCCGGTTTCCCCGTGCCGATGCTCCCGT
ATATGCTAGAAGAGCGCCTTCACAACGACCCCTCCCAAACCACTGCTACC
ACCAACAGCCTGCTCAGTCTACACGGTCTGGCGTCAATAATAGCTGCCCC
TTCTTGCGCGGCTTTGTTCGACACTATCTCAAACCAGAAAATCCCGCTTT
ATCTGGCACTTGTGCTTTGCCTGGTTGGGACTGCGCTGTTTGCAATCACC
ACCACATATGACAGCCTCCGCAGAGCGCTCGACCGCCAAGGGATGGAGAT
CTTCCAGCCAGTTCATCATCGGGACCGCGTGCCTGGCCATGTTTACTGGT
GCTGCTTGCATGGGGGTGGCGGGGGTGACGTTTATATTCTGTTGATCCTC
CTGGAGGAAGTTGAAAAAGATGCTCCCACCATGTTTGGCCCCAATGGTGG
GCGTGCGAGGTGCTTCGCATTGGTGTCTATCTCGTTTAACCTCGGTCTGA
TGCTGGGTCCATTTGTTATTGGATGGCTGTTTGAGCAAGTGGGATACTAT
TATATGAATATCGCTCTCGCATGGGTGCTATACCTGGGCAGGATTCTGCA
GGCAGTTGCTGGCTCGGCTGCATGGCTCGCGTGTACGACCATGCTCACCG
AGCTCGCAGGTAGTGCAGGAGCTGGGACAATGTTGGGACTGAGCATGTCT
TCTGCAACTTTGGGAACGGTGAGCGGACCAATGCTTGGAGGCGTTCTGTT
GGGCTGGTTCGGATACTGGCCAGCTTGGTCTCTACCAATGGTTCTACTAA
TTCTCGACATGATTGCGCGCTTTGTTCTGATTCAACCCGACCATCTTTTA
CTGGATTCACCGTCTCTAATCAGACATGCCGAGCGCAGCAAGCTATGTCA
TGAAATGGAGGAAACTGTGACGGAAACGTCCCCTTTCCTGCCACAATCGC
CTTCATTTGGCTCAGATACCGCAGCGGAGGAAAAGTCTGACAACGCTGCG
ACTACGAAATATCGCAATTACTATACAGTAATGCTCCAAGATGCTGGAAT
GTGGGCAGGCGTTCTGAATACGATGTCCCAAGCTGCACTACGGGCGGCAT
TCAACGCTACCTTGCCCGTGTATCTTCGGGATACCTTTAATTGGGGCCCA
TCATCAGTCGGGGCGATTTTCTTTGCCCTCCAAGTCCCTATAATCTTGTT
CTCTCCCCTTATTGGCCACCTCCGAGATCGTGTCGGTACACGATACCCAA
CGGCGGTCGGTTGGGCTCTTCTTTGCCCTCTGATGTGCTACTTGGGCATA
CCTGGCAGAGACGTCTCTCAGGCTAGTGGGAGCCGGACAGGTGAAGAGGT
CGCTTTTATTGCGTGCATATGTGGTATAGGCTTAGTGATGCCATCGGTTC
AAGGTGCCGGATCATTTCACATGCGCTAGTCGCTTTTAGCCGGTTTCCCC
GTGCCGATGCTCCCGTATATGCTAGAAGAGCGCCTTCACAACGACCCCTC
CCAAACCACTGCTACCACCAACAGCCTGCTCAGTCTACACGGTCTGGCGT
CAATAATAGCTGCCCCTTCTTGCGCGGCTTTGTTCGACACTATCTCAAAC
CAGAAAATCCCGCTTTATCTGGCACTTGTGCTTTGCCTGGTTGGGACTGC
GCTGTTTGCAATCACCACCACATATGACAGCCTCCGCAGAGCGCTCGACC
GCCAAGGGATGGAGATCTTCCAGCCAGTTCATCATCGGGACCGCGTGCCT
GGCCATGTTTACTGGTGCTGCTTGCATGGGGGTGGCGGGGGTGACGTTTA
TATTCTGTTGATCCTCCTGGAGGAAGTTGAAAAAGATGCTCCCACCATGT
TTGGCCCCAATGGTGGGCGTGCGAGGTGCTTCGCATTGGTGTCTATCTCG
TTTAACCTCGGTCTGATGCTGGGTCCATTTGTTATTGGATGGCTGTTTGA
GCAAGTGGGATACTATTATATGAATATCGCTCTCGCATGGGTGCTATACC
TGGGCAGGATTCTGCAGGCAGTTGCTGGCTCGGCTGCATGGCTCGCGTGT
ACGACCATGCTCACCGAGCTCGCAGGTAGTGCAGGAGCTGGGACAATGTT
GGGACTGAGCATGTCTTCTGCAACTTTGGGAACGGTGAGCGGACCAATGC
TTGGAGGCGTTCTGTTGGGCTGGTTCGGATACTGGCCAGCTTGGTCTCTA
CCAATGGTTCTACTAATTCTCGACATGATTGCGCGCTTTGTTCTGATTCA
ACCCGACCATCTTTTACTGGATTCACCGTCTCTAATCAGACATGCCGAGC
GCAGCAAGCTATGTCATGAAATGGAGGAAACTGTGACGGAAACGTCCCCT
TTCCTGCCACAATCGCCTTCATTTGGCTCAGATACCGCAGCGGAGGAAAA
GTCTGACAACGCTGCGACTACGAAATATCGCAATTACTATACAGTAATGC
TCCAAGATGCTGGAATGTGGGCAGGCGTTCTGAATACGATGTCCCAAGCT
GCACTACGGGCGGCATTCAACGCTACCTTGCCCGTGTATCTTCGGGATAC
CTTTAATTGGGGCCCATCATCAGTCGGGGCGATTTTCTTTGCCCTCCAAG
TCCCTATAATCTTGTTCTCTCCCCTTATTGGCCACCTCCGAGATCGTGTC
GGTACACGATACCCAACGGCGGTCGGTTGGGCTCTTCTTTGCCCTCTGAT
GTGCTACTTGGGCATACCTGGCAGAGACGTCTCTCAGGCTAGTGGGAGCC
GGACAGGTGAAGAGGTCGCTTTTATTGCGTGCATATGTGGTATAGGCTTA
GTGATGCCATCGGTTCAAGGTGCCGGATCATTTCACATGCGCTAGTCGCT
TTTAGCCGGTTTCCCCGTGCCGATGCTCCCGTATATGCTAGAAGAGCGCC
TTCACAACGACCCCTCCCAAACCACTGCTACCACCAACAGCCTGCTCAGT
CTACACGGTCTGGCGTCAATAATAGCTGCCCCTTCTTGCGCGGCTTTGTT
CGACACTATCTCAAACCAGAAAATCCCGCTTTATCTGGCACTTGTGCTTT
GCCTGGTTGGGACTGCGCTGTTTGCAATCACCACCACATATGACAGCCTC
CGCAGAGCGCTCGACCGCCAAGGGATGGAGATCTTCCAGCCAGTTCATCA
TCGGGACCGCGTGCCTGGCCATGTTTACTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004681KJC3_004681Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004681-T1KJC3_004681-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004681-T1.cdsKJC3_004681-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004681-T1.exon5KJC3_004681-T1.exon5Aspergillus niger KJC3exon
KJC3_004681-T1.exon4KJC3_004681-T1.exon4Aspergillus niger KJC3exon
KJC3_004681-T1.exon3KJC3_004681-T1.exon3Aspergillus niger KJC3exon
KJC3_004681-T1.exon2KJC3_004681-T1.exon2Aspergillus niger KJC3exon
KJC3_004681-T1.exon1KJC3_004681-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004681-T1.utr5p1KJC3_004681-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefInterPro:IPR001958
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:393064..394773 -
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