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KJC3_004683-T1, KJC3_004683-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004683-T1
Unique NameKJC3_004683-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:402284..403718+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004683-T1 ID=KJC3_004683-T1|Name=KJC3_004683-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1435bp|location=Sequence derived from alignment at ch4:402284..403718+ (Aspergillus niger KJC3)
ATGTCTGCAAAGCCAGCAGACGCCTCCCGGCCTCGCGCCGCTGACCCTAA
GAAGGTCCACATTGCTGATACTGTCATGACACGCGGCAACTGGTACAAGC
ATGTCAACTGGCTGAACGTCTTCCTCATCATCGGTATCCCCGTGTACGGC
TGTGTTCAGGCCTTCTGGGTGCCCTTGCAGGTCAAGACTGCTATCTGGGC
CGTTATCTATTACTTCTTCACTGGTCTGGGTATCACCGCAGGTTGGTTTG
CCCTATTGGAAAGTAACATACTTCAAGACAACATGCTGATAAAATTTGCT
TTCAGGATACCATCGTCTCTGGGCTCACTGCTCTTACTCTGCTCGTCTTC
CTCTCCGTATCTGGCTCGCCGCTGTTGGTGGTGGTGCCGTCGAAGGTTCT
ATCCGCTGGTGGGCGCGTGATCACCGGGCTCACCACCGTTATACCGATAC
CGACAAGGACCCCTACTCCGTCCGCAAGGGTCTGCTCTACTCCCACCTGG
GATGGATGGTCATGAAGCAGAACCCCAAGCGTATTGGCCGCACCGATATC
TCCGATCTCAACGAAGACCCTGTTGTTGTCTGGCAGCACCGCAACTACCT
CAAGGTCGTCTTCACCATGGGCCTGATTGTTCCCATGCTCGTCTCCGGTC
TTGGCTGGGGTGACTGGTGGGGTGGTTTCGTTTACGCCGGTATCCTGCGT
ATCTTCTTCGTTCAGCAGGCTACCTTCTGTGTCAACTCTCTGGCCCACTG
GCTCGGTGACCAGCCCTTCGACGACCGCAACTCTCCCCGTGACCACGTCA
TCACTGCTCTTGTCACTCTCGGCGAGGGATACCACAACTTTCACCACGAG
TTCCCCTCTGACTACCGCAACGCTATCGAGTGGCACCAGTATGACCCGAC
CAAGTGGAGCATCTGGGCCTGGAAGCAGCTTGGTCTCGCCTACGACCTGA
AGAAGTTCCGTGCCAACGAGATCGAGAAGGGTCGTGTCCAGCAGCTCCAG
AAGAAGCTTGATCAGAAGCGTGCTCGTCTCGATTGGGGTACTCCTCTCGA
CCAGCTTCCCGTTATGGAATGGGACGACTATGTCGAGCAGGCTAAGAACG
GCCGTGGTCTCGTTGCTATTGCTGGTGTTGTCCACGACGTGACCGACTTC
ATCAAGGACCACCCCGGTGGCAAGGCCATGATCAACTCCGGCATCGGCAA
GGACGCTACTGCCATGTTCAACGGTGGTGTGTACTACCATTCCAACGCCG
CCCACAACCTTCTCTCTACCATGCGTGTGGGTGTGATCCGCGGTGGTTGT
GAGGTTGAGATCTGGAAGCGGGCTCAGAAGGAGGGCGCCGGCTATGTTCG
CGACGATGCCGGCCAGCGGGTGATCCGGGCCGGTGAGCAGGTCACCAAGA
TCCCTGAGCCTATCCCCACTGCCGATGCTGCGTAA
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Coding sequence (CDS) from alignment at ch4:402284..403718+

>KJC3_004683-T1 ID=KJC3_004683-T1|Name=KJC3_004683-T1|organism=Aspergillus niger KJC3|type=CDS|length=2742bp|location=Sequence derived from alignment at ch4:402284..403718+ (Aspergillus niger KJC3)
ATGTCTGCAAAGCCAGCAGACGCCTCCCGGCCTCGCGCCGCTGACCCTAA
GAAGGTCCACATTGCTGATACTGTCATGACACGCGGCAACTGGTACAAGC
ATGTCAACTGGCTGAACGTCTTCCTCATCATCGGTATCCCCGTGTACGGC
TGTGTTCAGGCCTTCTGGGTGCCCTTGCAGGTCAAGACTGCTATCTGGGC
CGTTATCTATTACTTCTTCACTGGTCTGGGTATCACCGCAGGATACCATC
GTCTCTGGGCTCACTGCTCTTACTCTGCTCGTCTTCCTCTCCGTATCTGG
CTCGCCGCTGTTGGTGGTGGTGCCGTCGAAGGTTCTATCCGCTGGTGGGC
GCGTGATCACCGGGCTCACCACCGTTATACCGATACCGACAAGGACCCCT
ACTCCGTCCGCAAGGGTCTGCTCTACTCCCACCTGGGATGGATGGTCATG
AAGCAGAACCCCAAGCGTATTGGCCGCACCGATATCTCCGATCTCAACGA
AGACCCTGTTGTTGTCTGGCAGCACCGCAACTACCTCAAGGTCGTCTTCA
CCATGGGCCTGATTGTTCCCATGCTCGTCTCCGGTCTTGGCTGGGGTGAC
TGGTGGGGTGGTTTCGTTTACGCCGGTATCCTGCGTATCTTCTTCGTTCA
GCAGGCTACCTTCTGTGTCAACTCTCTGGCCCACTGGCTCGGTGACCAGC
CCTTCGACGACCGCAACTCTCCCCGTGACCACGTCATCACTGCTCTTGTC
ACTCTCGGCGAGGGATACCACAACTTTCACCACGAGTTCCCCTCTGACTA
CCGCAACGCTATCGAGTGGCACCAGTATGACCCGACCAAGTGGAGCATCT
GGGCCTGGAAGCAGCTTGGTCTCGCCTACGACCTGAAGAAGTTCCGTGCC
AACGAGATCGAGAAGGGTCGTGTCCAGCAGCTCCAGAAGAAGCTTGATCA
GAAGCGTGCTCGTCTCGATTGGGGTACTCCTCTCGACCAGCTTCCCGTTA
TGGAATGGGACGACTATGTCGAGCAGGCTAAGAACGGCCGTGGTCTCGTT
GCTATTGCTGGTGTTGTCCACGACGTGACCGACTTCATCAAGGACCACCC
CGGTGGCAAGGCCATGATCAACTCCGGCATCGGCAAGGACGCTACTGCCA
TGTTCAACGGTGGTGTGTACTACCATTCCAACGCCGCCCACAACCTTCTC
TCTACCATGCGTGTGGGTGTGATCCGCGGTGGTTGTGAGGTTGAGATCTG
GAAGCGGGCTCAGAAGGAGGGCGCCGGCTATGTTCGCGACGATGCCGGCC
AGCGGGTGATCCGGGCCGGTGAGCAGGTCACCAAGATCCCTGAGCCTATC
CCCACTGCCGATGCTGCGTAAATGTCTGCAAAGCCAGCAGACGCCTCCCG
GCCTCGCGCCGCTGACCCTAAGAAGGTCCACATTGCTGATACTGTCATGA
CACGCGGCAACTGGTACAAGCATGTCAACTGGCTGAACGTCTTCCTCATC
ATCGGTATCCCCGTGTACGGCTGTGTTCAGGCCTTCTGGGTGCCCTTGCA
GGTCAAGACTGCTATCTGGGCCGTTATCTATTACTTCTTCACTGGTCTGG
GTATCACCGCAGGATACCATCGTCTCTGGGCTCACTGCTCTTACTCTGCT
CGTCTTCCTCTCCGTATCTGGCTCGCCGCTGTTGGTGGTGGTGCCGTCGA
AGGTTCTATCCGCTGGTGGGCGCGTGATCACCGGGCTCACCACCGTTATA
CCGATACCGACAAGGACCCCTACTCCGTCCGCAAGGGTCTGCTCTACTCC
CACCTGGGATGGATGGTCATGAAGCAGAACCCCAAGCGTATTGGCCGCAC
CGATATCTCCGATCTCAACGAAGACCCTGTTGTTGTCTGGCAGCACCGCA
ACTACCTCAAGGTCGTCTTCACCATGGGCCTGATTGTTCCCATGCTCGTC
TCCGGTCTTGGCTGGGGTGACTGGTGGGGTGGTTTCGTTTACGCCGGTAT
CCTGCGTATCTTCTTCGTTCAGCAGGCTACCTTCTGTGTCAACTCTCTGG
CCCACTGGCTCGGTGACCAGCCCTTCGACGACCGCAACTCTCCCCGTGAC
CACGTCATCACTGCTCTTGTCACTCTCGGCGAGGGATACCACAACTTTCA
CCACGAGTTCCCCTCTGACTACCGCAACGCTATCGAGTGGCACCAGTATG
ACCCGACCAAGTGGAGCATCTGGGCCTGGAAGCAGCTTGGTCTCGCCTAC
GACCTGAAGAAGTTCCGTGCCAACGAGATCGAGAAGGGTCGTGTCCAGCA
GCTCCAGAAGAAGCTTGATCAGAAGCGTGCTCGTCTCGATTGGGGTACTC
CTCTCGACCAGCTTCCCGTTATGGAATGGGACGACTATGTCGAGCAGGCT
AAGAACGGCCGTGGTCTCGTTGCTATTGCTGGTGTTGTCCACGACGTGAC
CGACTTCATCAAGGACCACCCCGGTGGCAAGGCCATGATCAACTCCGGCA
TCGGCAAGGACGCTACTGCCATGTTCAACGGTGGTGTGTACTACCATTCC
AACGCCGCCCACAACCTTCTCTCTACCATGCGTGTGGGTGTGATCCGCGG
TGGTTGTGAGGTTGAGATCTGGAAGCGGGCTCAGAAGGAGGGCGCCGGCT
ATGTTCGCGACGATGCCGGCCAGCGGGTGATCCGGGCCGGTGAGCAGGTC
ACCAAGATCCCTGAGCCTATCCCCACTGCCGATGCTGCGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0020037heme binding
GO:0004768stearoyl-CoA 9-desaturase activity
GO:0016717oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
Vocabulary: Biological Process
TermDefinition
GO:0006636unsaturated fatty acid biosynthetic process
GO:0006629lipid metabolic process
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
OLE1_2KJC3_004683Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004683-T1.exon1KJC3_004683-T1.exon1Aspergillus niger KJC3exon
KJC3_004683-T1.exon2KJC3_004683-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004683-T1.cdsKJC3_004683-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004683-T1KJC3_004683-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR001522
DBxrefInterPro:IPR018506
DBxrefInterPro:IPR009160
DBxrefInterPro:IPR005804
DBxrefInterPro:IPR036400
DBxrefInterPro:IPR015876
DBxrefInterPro:IPR001199
DBxrefPFAM:PF00487
DBxrefPFAM:PF00173
Productstearoyl-CoA 9-desaturase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:402284..403718 +
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