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KJC3_004688-T1, KJC3_004688-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004688-T1
Unique NameKJC3_004688-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:417193..418609-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004688-T1 ID=KJC3_004688-T1|Name=KJC3_004688-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1417bp|location=Sequence derived from alignment at ch4:417193..418609- (Aspergillus niger KJC3)
CTCCATTCTTGATCCCCCACGACCTCTTTCCATCTCCGTTCACCTTTCAT
CCATCACTTCTGCACACTTTCATACCCGCTGGAGCTTGTAATTGTGGAAA
GACGCACTCATGGCTGATCGCTACTCCTTCTCTCTGACCACGTTCTCCCC
CAGGTAAGAGAAGCTCACTGCTCGATAGCTCGGGTCCTTGCTAACATTGC
TCAGCGGAAAGCTGGTTCAGATTGGTAAATAATCGCTGCCACTGCCTGCA
GCCTAAACATTTGTGCTGACGAGTCTTAGAATATGCCTTGAACGCTGTTA
ACCAGGGTGTAACTGCTCTGGGCATCAAAGGTATGACATAGCTCTGACCC
GCTCGAGCTAGCTTCGAATAGCTACTGATGACCAACCCTACTCAATAGCT
ACCAACGGAATTGTTCTTGCAACCGAAAAGAAAGCGAACTCGCCTCTCAT
TGACCCACCTTCCCTCTCCAAGATCTCCCTGATTACGCCCGACATCGGCA
TGGTCTACGCAGGAATGGGTCCCGATTACCGTGTGCTCGTGGATCGGGCC
CGCAAGGTTTCTCACACTGGCTACAAGCGCATTTACAACGAATACCCCCC
TACCCGGATATTAGTGCAGGACGTTGCCCGGGTTGTCCAAGAAGCGACTC
AGTCCGGTGGTGTCCGACCGTACGGTGTCAGCTTGTTGATTGCTGGCTGG
GACGAGGGCGTTGAACCTGAATCGGGAGAGGCTCAGCGGGGTGACGGTGA
GGACGAGCCTAAGAAAGCAACCGGCAAGACGGGTGGTATCTTGAAGGGCG
GCCCCAGTCTGTACCAAGTCGACCCCAGTGGCAGTTACTATCCGTGGAAG
GCTACGGCCATTGGAAGGCACGCGACGAGCGCAAAGACATTCCTTGAGAA
ACGTTACACCGAAGGTCTCGAGCTGGAAGATGCCATTCACATCGCTCTTC
TAACTTTGAAGGAGACTATCGAGGGAGAGATGAACGGTGATACGATAGAA
ATTGGTGAGTTTCACATCTGGCAGTTCCTGATAGCTGTCGTGCTGACGAT
TATAGGCATTGTTGGTCCTCCTGCCGATCACCTGCTTGGTTATGAGGGCG
TCGAAGGATCGCGCGGACCCCGCTTCAGGAAGCTGAGTAAGGAGGAGATT
GAGGACTATCTCACCAACCTATGAACTATTCCATAGATCTATACAGATCT
TGACATATTGAGCCTTGTAGTATAATAGACACGACTCAAGTCTTGCGAGG
TTCCCACGATATGACAGGGCGTCCCGACAACGCAGAAACCGGGAGCTGAA
TGGTGGGTTTTCAGGAGTGACCCTGGAACCTGACGAAATATTTGGGCGAT
TCTAGACTCGCCAGTAATACTTCAAAAACCTGATCCGAAATGAATGCTAT
TGTCAATGAAACTGCAC
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Coding sequence (CDS) from alignment at ch4:417193..418609-

>KJC3_004688-T1 ID=KJC3_004688-T1|Name=KJC3_004688-T1|organism=Aspergillus niger KJC3|type=CDS|length=4200bp|location=Sequence derived from alignment at ch4:417193..418609- (Aspergillus niger KJC3)
GCATTGTTGGTCCTCCTGCCGATCACCTGCTTGGTTATGAGGGCGTCGAA
GGATCGCGCGGACCCCGCTTCAGGAAGCTGAGTAAGGAGGAGATTGAGGA
CTATCTCACCAACCTATGACTACCAACGGAATTGTTCTTGCAACCGAAAA
GAAAGCGAACTCGCCTCTCATTGACCCACCTTCCCTCTCCAAGATCTCCC
TGATTACGCCCGACATCGGCATGGTCTACGCAGGAATGGGTCCCGATTAC
CGTGTGCTCGTGGATCGGGCCCGCAAGGTTTCTCACACTGGCTACAAGCG
CATTTACAACGAATACCCCCCTACCCGGATATTAGTGCAGGACGTTGCCC
GGGTTGTCCAAGAAGCGACTCAGTCCGGTGGTGTCCGACCGTACGGTGTC
AGCTTGTTGATTGCTGGCTGGGACGAGGGCGTTGAACCTGAATCGGGAGA
GGCTCAGCGGGGTGACGGTGAGGACGAGCCTAAGAAAGCAACCGGCAAGA
CGGGTGGTATCTTGAAGGGCGGCCCCAGTCTGTACCAAGTCGACCCCAGT
GGCAGTTACTATCCGTGGAAGGCTACGGCCATTGGAAGGCACGCGACGAG
CGCAAAGACATTCCTTGAGAAACGTTACACCGAAGGTCTCGAGCTGGAAG
ATGCCATTCACATCGCTCTTCTAACTTTGAAGGAGACTATCGAGGGAGAG
ATGAACGGTGATACGATAGAAATTGAATATGCCTTGAACGCTGTTAACCA
GGGTGTAACTGCTCTGGGCATCAAAGCGGAAAGCTGGTTCAGATTGATGG
CTGATCGCTACTCCTTCTCTCTGACCACGTTCTCCCCCAGGCATTGTTGG
TCCTCCTGCCGATCACCTGCTTGGTTATGAGGGCGTCGAAGGATCGCGCG
GACCCCGCTTCAGGAAGCTGAGTAAGGAGGAGATTGAGGACTATCTCACC
AACCTATGACTACCAACGGAATTGTTCTTGCAACCGAAAAGAAAGCGAAC
TCGCCTCTCATTGACCCACCTTCCCTCTCCAAGATCTCCCTGATTACGCC
CGACATCGGCATGGTCTACGCAGGAATGGGTCCCGATTACCGTGTGCTCG
TGGATCGGGCCCGCAAGGTTTCTCACACTGGCTACAAGCGCATTTACAAC
GAATACCCCCCTACCCGGATATTAGTGCAGGACGTTGCCCGGGTTGTCCA
AGAAGCGACTCAGTCCGGTGGTGTCCGACCGTACGGTGTCAGCTTGTTGA
TTGCTGGCTGGGACGAGGGCGTTGAACCTGAATCGGGAGAGGCTCAGCGG
GGTGACGGTGAGGACGAGCCTAAGAAAGCAACCGGCAAGACGGGTGGTAT
CTTGAAGGGCGGCCCCAGTCTGTACCAAGTCGACCCCAGTGGCAGTTACT
ATCCGTGGAAGGCTACGGCCATTGGAAGGCACGCGACGAGCGCAAAGACA
TTCCTTGAGAAACGTTACACCGAAGGTCTCGAGCTGGAAGATGCCATTCA
CATCGCTCTTCTAACTTTGAAGGAGACTATCGAGGGAGAGATGAACGGTG
ATACGATAGAAATTGAATATGCCTTGAACGCTGTTAACCAGGGTGTAACT
GCTCTGGGCATCAAAGCGGAAAGCTGGTTCAGATTGATGGCTGATCGCTA
CTCCTTCTCTCTGACCACGTTCTCCCCCAGGCATTGTTGGTCCTCCTGCC
GATCACCTGCTTGGTTATGAGGGCGTCGAAGGATCGCGCGGACCCCGCTT
CAGGAAGCTGAGTAAGGAGGAGATTGAGGACTATCTCACCAACCTATGAC
TACCAACGGAATTGTTCTTGCAACCGAAAAGAAAGCGAACTCGCCTCTCA
TTGACCCACCTTCCCTCTCCAAGATCTCCCTGATTACGCCCGACATCGGC
ATGGTCTACGCAGGAATGGGTCCCGATTACCGTGTGCTCGTGGATCGGGC
CCGCAAGGTTTCTCACACTGGCTACAAGCGCATTTACAACGAATACCCCC
CTACCCGGATATTAGTGCAGGACGTTGCCCGGGTTGTCCAAGAAGCGACT
CAGTCCGGTGGTGTCCGACCGTACGGTGTCAGCTTGTTGATTGCTGGCTG
GGACGAGGGCGTTGAACCTGAATCGGGAGAGGCTCAGCGGGGTGACGGTG
AGGACGAGCCTAAGAAAGCAACCGGCAAGACGGGTGGTATCTTGAAGGGC
GGCCCCAGTCTGTACCAAGTCGACCCCAGTGGCAGTTACTATCCGTGGAA
GGCTACGGCCATTGGAAGGCACGCGACGAGCGCAAAGACATTCCTTGAGA
AACGTTACACCGAAGGTCTCGAGCTGGAAGATGCCATTCACATCGCTCTT
CTAACTTTGAAGGAGACTATCGAGGGAGAGATGAACGGTGATACGATAGA
AATTGAATATGCCTTGAACGCTGTTAACCAGGGTGTAACTGCTCTGGGCA
TCAAAGCGGAAAGCTGGTTCAGATTGATGGCTGATCGCTACTCCTTCTCT
CTGACCACGTTCTCCCCCAGGCATTGTTGGTCCTCCTGCCGATCACCTGC
TTGGTTATGAGGGCGTCGAAGGATCGCGCGGACCCCGCTTCAGGAAGCTG
AGTAAGGAGGAGATTGAGGACTATCTCACCAACCTATGACTACCAACGGA
ATTGTTCTTGCAACCGAAAAGAAAGCGAACTCGCCTCTCATTGACCCACC
TTCCCTCTCCAAGATCTCCCTGATTACGCCCGACATCGGCATGGTCTACG
CAGGAATGGGTCCCGATTACCGTGTGCTCGTGGATCGGGCCCGCAAGGTT
TCTCACACTGGCTACAAGCGCATTTACAACGAATACCCCCCTACCCGGAT
ATTAGTGCAGGACGTTGCCCGGGTTGTCCAAGAAGCGACTCAGTCCGGTG
GTGTCCGACCGTACGGTGTCAGCTTGTTGATTGCTGGCTGGGACGAGGGC
GTTGAACCTGAATCGGGAGAGGCTCAGCGGGGTGACGGTGAGGACGAGCC
TAAGAAAGCAACCGGCAAGACGGGTGGTATCTTGAAGGGCGGCCCCAGTC
TGTACCAAGTCGACCCCAGTGGCAGTTACTATCCGTGGAAGGCTACGGCC
ATTGGAAGGCACGCGACGAGCGCAAAGACATTCCTTGAGAAACGTTACAC
CGAAGGTCTCGAGCTGGAAGATGCCATTCACATCGCTCTTCTAACTTTGA
AGGAGACTATCGAGGGAGAGATGAACGGTGATACGATAGAAATTGAATAT
GCCTTGAACGCTGTTAACCAGGGTGTAACTGCTCTGGGCATCAAAGCGGA
AAGCTGGTTCAGATTGATGGCTGATCGCTACTCCTTCTCTCTGACCACGT
TCTCCCCCAGGCATTGTTGGTCCTCCTGCCGATCACCTGCTTGGTTATGA
GGGCGTCGAAGGATCGCGCGGACCCCGCTTCAGGAAGCTGAGTAAGGAGG
AGATTGAGGACTATCTCACCAACCTATGACTACCAACGGAATTGTTCTTG
CAACCGAAAAGAAAGCGAACTCGCCTCTCATTGACCCACCTTCCCTCTCC
AAGATCTCCCTGATTACGCCCGACATCGGCATGGTCTACGCAGGAATGGG
TCCCGATTACCGTGTGCTCGTGGATCGGGCCCGCAAGGTTTCTCACACTG
GCTACAAGCGCATTTACAACGAATACCCCCCTACCCGGATATTAGTGCAG
GACGTTGCCCGGGTTGTCCAAGAAGCGACTCAGTCCGGTGGTGTCCGACC
GTACGGTGTCAGCTTGTTGATTGCTGGCTGGGACGAGGGCGTTGAACCTG
AATCGGGAGAGGCTCAGCGGGGTGACGGTGAGGACGAGCCTAAGAAAGCA
ACCGGCAAGACGGGTGGTATCTTGAAGGGCGGCCCCAGTCTGTACCAAGT
CGACCCCAGTGGCAGTTACTATCCGTGGAAGGCTACGGCCATTGGAAGGC
ACGCGACGAGCGCAAAGACATTCCTTGAGAAACGTTACACCGAAGGTCTC
GAGCTGGAAGATGCCATTCACATCGCTCTTCTAACTTTGAAGGAGACTAT
CGAGGGAGAGATGAACGGTGATACGATAGAAATTGAATATGCCTTGAACG
CTGTTAACCAGGGTGTAACTGCTCTGGGCATCAAAGCGGAAAGCTGGTTC
AGATTGATGGCTGATCGCTACTCCTTCTCTCTGACCACGTTCTCCCCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
GO:0019773proteasome core complex, alpha-subunit complex
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
GO:0004175endopeptidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PCA2KJC3_004688Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004688-T1KJC3_004688-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004688-T1.cdsKJC3_004688-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004688-T1.utr3p1KJC3_004688-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004688-T1.exon5KJC3_004688-T1.exon5Aspergillus niger KJC3exon
KJC3_004688-T1.exon4KJC3_004688-T1.exon4Aspergillus niger KJC3exon
KJC3_004688-T1.exon3KJC3_004688-T1.exon3Aspergillus niger KJC3exon
KJC3_004688-T1.exon2KJC3_004688-T1.exon2Aspergillus niger KJC3exon
KJC3_004688-T1.exon1KJC3_004688-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004688-T1.utr5p1KJC3_004688-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092645G0
NoteMEROPS:MER0004996
DBxrefInterPro:IPR023332
DBxrefInterPro:IPR001353
DBxrefInterPro:IPR029055
DBxrefInterPro:IPR000426
DBxrefPFAM:PF10584
DBxrefPFAM:PF00227
ProductProbable proteasome subunit alpha type-2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:417193..418609 -
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