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KJC3_004702-T1, KJC3_004702-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004702-T1
Unique NameKJC3_004702-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:454598..456301-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004702-T1 ID=KJC3_004702-T1|Name=KJC3_004702-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1704bp|location=Sequence derived from alignment at ch4:454598..456301- (Aspergillus niger KJC3)
CTCCCTTCTTCTCCTTCTTCTCTCTCTCTCTCTCTTTCCTCTCCATCGCA
ATTGTTTCTCTTCTCTCCTCTCCATCTCCCCATTTCTTCTTTCAGATAGA
TCTACCTCTGTCTACCCTCACAGTCAAGATGTTCGCTGCTCGTCAGTCCC
TCAACCTCCTCCAGAAGCGTAGCTTCTCCGCTTCTGCCAGCCAGGTGTGT
AGTCCCCCCAAAAAACATTGCCTCGGAGCTCTTCGTTGCCTTGCTAACCA
TCGCAATTTCCATCTCAGGCCTCCAAGGTTGCCGTTCTCGGTGCCGCCGG
TGGCATTGGCCAGCCTCTGTCCCTGCTCATGAAGCAGAACCCCCTTGTCA
CTGACCTCGCCCTCTACGACATCCGCGGTGGACCTGGTACGTCGCACAAC
ATCTCCCTTCCCCCGACCTGAAACACCCATCCGATCATCGGAGTCGACTA
ACAGAAGCTTCAAACAGGTGTCGCTGCTGATATCAGCCACATCAACACCA
ACAGCACCGTCAAGGGCTACGAGCCTACTCCCTCTGGCCTCCGCGATGCC
CTCAAGGGCTCCGAGATCATCCTCATCCCTGCCGGTGTTCCCCGCAAGCC
CGGCATGACCCGTGATGGTATGCGCTGGACCACTTCAAACCTAGAAAAGT
CATGAGCGTCAGACTAATCGCGCCATTGATAGACCTCTTCAACACCAACG
CCTCCATCGTCCGCGACCTCGCCAAGGCCGCCGCTGAGGCTGCTCCCGAG
GCTAACATCCTCGTCATCTCCAACCCCGTACGTATTGACCTTGTTAAACA
ATCCCATTCATCGAACCTTGTACTCATTTTAACATCAGGTCAACTCCACC
GTCCCCATCGTCTCCGAGGTCTACAAGTCCAAGGGTGTCTACAACCCCAA
GCGCCTCTTCGGTGTCACCACCCTGGACGTTGTCCGTGCCTCCCGCTTCA
TCTCCCAGGTCAAGGGCACCAACCCCGCCAACGAGGCCGTCACCGTCATC
GGTGGCCACTCCGGTGTGACCATCGTTCCCCTCCTCTCCCAGTCCAACCA
CCCCGACATCTCTGGCACCGTCCGTGACGAGCTGGTCAACCGCATCCAGT
TCGGTGGTGACGAGGTCGTCAAGGCCAAGGACGGTGCTGGTTCCGCCACC
CTCTCCATGGCCATGGCCGGTGCTCGCTTCGCCGACTCCCTCCTCAGGGC
CGCCAACGGCGAGAAGGGCATCGTCGAGCCCACCTTCGTTGAGAGCCCTC
TCTTCAAGGACCAGGGTGTTAACTTCTTCGCCTCCAAGGTCGAGCTCGGC
CCCAACGGTGTTGAGAAGATCCACGAGGTTGGCCCCGTCAACGAGTACGA
GCAGGGTCTCATCCAGACCGCCCTCGGTGACCTCAAGAAGAACATCCAGA
AGGGTGTTGACTTCGTCAAGCAGAACCCTTGAATGGTTTCTGAATCTGAT
TGAAGAAGGGAACAAAATTGCAACATCTCTCTGCAGCCGCTTTCCTCCCT
GTATAACAGTCTTATGTTAATCCATACCCACTTCCCGTTCCCCTATGCAC
ATCCCCATCTCACATTTGGCTTTTATATCGGAGGAAATGTAGCTGCGGAA
CTCGCATAGCAATGAGTTTTGAGGAGCCTGGGACTGCCAGGGGAGATGGA
CATGACGTGTATTTCCTATAAATAAGAAAAATCTAATGATTCAATGACTA
GTGT
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Coding sequence (CDS) from alignment at ch4:454598..456301-

>KJC3_004702-T1 ID=KJC3_004702-T1|Name=KJC3_004702-T1|organism=Aspergillus niger KJC3|type=CDS|length=5115bp|location=Sequence derived from alignment at ch4:454598..456301- (Aspergillus niger KJC3)
GTCAACTCCACCGTCCCCATCGTCTCCGAGGTCTACAAGTCCAAGGGTGT
CTACAACCCCAAGCGCCTCTTCGGTGTCACCACCCTGGACGTTGTCCGTG
CCTCCCGCTTCATCTCCCAGGTCAAGGGCACCAACCCCGCCAACGAGGCC
GTCACCGTCATCGGTGGCCACTCCGGTGTGACCATCGTTCCCCTCCTCTC
CCAGTCCAACCACCCCGACATCTCTGGCACCGTCCGTGACGAGCTGGTCA
ACCGCATCCAGTTCGGTGGTGACGAGGTCGTCAAGGCCAAGGACGGTGCT
GGTTCCGCCACCCTCTCCATGGCCATGGCCGGTGCTCGCTTCGCCGACTC
CCTCCTCAGGGCCGCCAACGGCGAGAAGGGCATCGTCGAGCCCACCTTCG
TTGAGAGCCCTCTCTTCAAGGACCAGGGTGTTAACTTCTTCGCCTCCAAG
GTCGAGCTCGGCCCCAACGGTGTTGAGAAGATCCACGAGGTTGGCCCCGT
CAACGAGTACGAGCAGGGTCTCATCCAGACCGCCCTCGGTGACCTCAAGA
AGAACATCCAGAAGGGTGTTGACTTCGTCAAGCAGAACCCTTGAACCTCT
TCAACACCAACGCCTCCATCGTCCGCGACCTCGCCAAGGCCGCCGCTGAG
GCTGCTCCCGAGGCTAACATCCTCGTCATCTCCAACCCCGTGTCGCTGCT
GATATCAGCCACATCAACACCAACAGCACCGTCAAGGGCTACGAGCCTAC
TCCCTCTGGCCTCCGCGATGCCCTCAAGGGCTCCGAGATCATCCTCATCC
CTGCCGGTGTTCCCCGCAAGCCCGGCATGACCCGTGATGGCCTCCAAGGT
TGCCGTTCTCGGTGCCGCCGGTGGCATTGGCCAGCCTCTGTCCCTGCTCA
TGAAGCAGAACCCCCTTGTCACTGACCTCGCCCTCTACGACATCCGCGGT
GGACCTGATGTTCGCTGCTCGTCAGTCCCTCAACCTCCTCCAGAAGCGTA
GCTTCTCCGCTTCTGCCAGCCAGGTCAACTCCACCGTCCCCATCGTCTCC
GAGGTCTACAAGTCCAAGGGTGTCTACAACCCCAAGCGCCTCTTCGGTGT
CACCACCCTGGACGTTGTCCGTGCCTCCCGCTTCATCTCCCAGGTCAAGG
GCACCAACCCCGCCAACGAGGCCGTCACCGTCATCGGTGGCCACTCCGGT
GTGACCATCGTTCCCCTCCTCTCCCAGTCCAACCACCCCGACATCTCTGG
CACCGTCCGTGACGAGCTGGTCAACCGCATCCAGTTCGGTGGTGACGAGG
TCGTCAAGGCCAAGGACGGTGCTGGTTCCGCCACCCTCTCCATGGCCATG
GCCGGTGCTCGCTTCGCCGACTCCCTCCTCAGGGCCGCCAACGGCGAGAA
GGGCATCGTCGAGCCCACCTTCGTTGAGAGCCCTCTCTTCAAGGACCAGG
GTGTTAACTTCTTCGCCTCCAAGGTCGAGCTCGGCCCCAACGGTGTTGAG
AAGATCCACGAGGTTGGCCCCGTCAACGAGTACGAGCAGGGTCTCATCCA
GACCGCCCTCGGTGACCTCAAGAAGAACATCCAGAAGGGTGTTGACTTCG
TCAAGCAGAACCCTTGAACCTCTTCAACACCAACGCCTCCATCGTCCGCG
ACCTCGCCAAGGCCGCCGCTGAGGCTGCTCCCGAGGCTAACATCCTCGTC
ATCTCCAACCCCGTGTCGCTGCTGATATCAGCCACATCAACACCAACAGC
ACCGTCAAGGGCTACGAGCCTACTCCCTCTGGCCTCCGCGATGCCCTCAA
GGGCTCCGAGATCATCCTCATCCCTGCCGGTGTTCCCCGCAAGCCCGGCA
TGACCCGTGATGGCCTCCAAGGTTGCCGTTCTCGGTGCCGCCGGTGGCAT
TGGCCAGCCTCTGTCCCTGCTCATGAAGCAGAACCCCCTTGTCACTGACC
TCGCCCTCTACGACATCCGCGGTGGACCTGATGTTCGCTGCTCGTCAGTC
CCTCAACCTCCTCCAGAAGCGTAGCTTCTCCGCTTCTGCCAGCCAGGTCA
ACTCCACCGTCCCCATCGTCTCCGAGGTCTACAAGTCCAAGGGTGTCTAC
AACCCCAAGCGCCTCTTCGGTGTCACCACCCTGGACGTTGTCCGTGCCTC
CCGCTTCATCTCCCAGGTCAAGGGCACCAACCCCGCCAACGAGGCCGTCA
CCGTCATCGGTGGCCACTCCGGTGTGACCATCGTTCCCCTCCTCTCCCAG
TCCAACCACCCCGACATCTCTGGCACCGTCCGTGACGAGCTGGTCAACCG
CATCCAGTTCGGTGGTGACGAGGTCGTCAAGGCCAAGGACGGTGCTGGTT
CCGCCACCCTCTCCATGGCCATGGCCGGTGCTCGCTTCGCCGACTCCCTC
CTCAGGGCCGCCAACGGCGAGAAGGGCATCGTCGAGCCCACCTTCGTTGA
GAGCCCTCTCTTCAAGGACCAGGGTGTTAACTTCTTCGCCTCCAAGGTCG
AGCTCGGCCCCAACGGTGTTGAGAAGATCCACGAGGTTGGCCCCGTCAAC
GAGTACGAGCAGGGTCTCATCCAGACCGCCCTCGGTGACCTCAAGAAGAA
CATCCAGAAGGGTGTTGACTTCGTCAAGCAGAACCCTTGAACCTCTTCAA
CACCAACGCCTCCATCGTCCGCGACCTCGCCAAGGCCGCCGCTGAGGCTG
CTCCCGAGGCTAACATCCTCGTCATCTCCAACCCCGTGTCGCTGCTGATA
TCAGCCACATCAACACCAACAGCACCGTCAAGGGCTACGAGCCTACTCCC
TCTGGCCTCCGCGATGCCCTCAAGGGCTCCGAGATCATCCTCATCCCTGC
CGGTGTTCCCCGCAAGCCCGGCATGACCCGTGATGGCCTCCAAGGTTGCC
GTTCTCGGTGCCGCCGGTGGCATTGGCCAGCCTCTGTCCCTGCTCATGAA
GCAGAACCCCCTTGTCACTGACCTCGCCCTCTACGACATCCGCGGTGGAC
CTGATGTTCGCTGCTCGTCAGTCCCTCAACCTCCTCCAGAAGCGTAGCTT
CTCCGCTTCTGCCAGCCAGGTCAACTCCACCGTCCCCATCGTCTCCGAGG
TCTACAAGTCCAAGGGTGTCTACAACCCCAAGCGCCTCTTCGGTGTCACC
ACCCTGGACGTTGTCCGTGCCTCCCGCTTCATCTCCCAGGTCAAGGGCAC
CAACCCCGCCAACGAGGCCGTCACCGTCATCGGTGGCCACTCCGGTGTGA
CCATCGTTCCCCTCCTCTCCCAGTCCAACCACCCCGACATCTCTGGCACC
GTCCGTGACGAGCTGGTCAACCGCATCCAGTTCGGTGGTGACGAGGTCGT
CAAGGCCAAGGACGGTGCTGGTTCCGCCACCCTCTCCATGGCCATGGCCG
GTGCTCGCTTCGCCGACTCCCTCCTCAGGGCCGCCAACGGCGAGAAGGGC
ATCGTCGAGCCCACCTTCGTTGAGAGCCCTCTCTTCAAGGACCAGGGTGT
TAACTTCTTCGCCTCCAAGGTCGAGCTCGGCCCCAACGGTGTTGAGAAGA
TCCACGAGGTTGGCCCCGTCAACGAGTACGAGCAGGGTCTCATCCAGACC
GCCCTCGGTGACCTCAAGAAGAACATCCAGAAGGGTGTTGACTTCGTCAA
GCAGAACCCTTGAACCTCTTCAACACCAACGCCTCCATCGTCCGCGACCT
CGCCAAGGCCGCCGCTGAGGCTGCTCCCGAGGCTAACATCCTCGTCATCT
CCAACCCCGTGTCGCTGCTGATATCAGCCACATCAACACCAACAGCACCG
TCAAGGGCTACGAGCCTACTCCCTCTGGCCTCCGCGATGCCCTCAAGGGC
TCCGAGATCATCCTCATCCCTGCCGGTGTTCCCCGCAAGCCCGGCATGAC
CCGTGATGGCCTCCAAGGTTGCCGTTCTCGGTGCCGCCGGTGGCATTGGC
CAGCCTCTGTCCCTGCTCATGAAGCAGAACCCCCTTGTCACTGACCTCGC
CCTCTACGACATCCGCGGTGGACCTGATGTTCGCTGCTCGTCAGTCCCTC
AACCTCCTCCAGAAGCGTAGCTTCTCCGCTTCTGCCAGCCAGGTCAACTC
CACCGTCCCCATCGTCTCCGAGGTCTACAAGTCCAAGGGTGTCTACAACC
CCAAGCGCCTCTTCGGTGTCACCACCCTGGACGTTGTCCGTGCCTCCCGC
TTCATCTCCCAGGTCAAGGGCACCAACCCCGCCAACGAGGCCGTCACCGT
CATCGGTGGCCACTCCGGTGTGACCATCGTTCCCCTCCTCTCCCAGTCCA
ACCACCCCGACATCTCTGGCACCGTCCGTGACGAGCTGGTCAACCGCATC
CAGTTCGGTGGTGACGAGGTCGTCAAGGCCAAGGACGGTGCTGGTTCCGC
CACCCTCTCCATGGCCATGGCCGGTGCTCGCTTCGCCGACTCCCTCCTCA
GGGCCGCCAACGGCGAGAAGGGCATCGTCGAGCCCACCTTCGTTGAGAGC
CCTCTCTTCAAGGACCAGGGTGTTAACTTCTTCGCCTCCAAGGTCGAGCT
CGGCCCCAACGGTGTTGAGAAGATCCACGAGGTTGGCCCCGTCAACGAGT
ACGAGCAGGGTCTCATCCAGACCGCCCTCGGTGACCTCAAGAAGAACATC
CAGAAGGGTGTTGACTTCGTCAAGCAGAACCCTTGAACCTCTTCAACACC
AACGCCTCCATCGTCCGCGACCTCGCCAAGGCCGCCGCTGAGGCTGCTCC
CGAGGCTAACATCCTCGTCATCTCCAACCCCGTGTCGCTGCTGATATCAG
CCACATCAACACCAACAGCACCGTCAAGGGCTACGAGCCTACTCCCTCTG
GCCTCCGCGATGCCCTCAAGGGCTCCGAGATCATCCTCATCCCTGCCGGT
GTTCCCCGCAAGCCCGGCATGACCCGTGATGGCCTCCAAGGTTGCCGTTC
TCGGTGCCGCCGGTGGCATTGGCCAGCCTCTGTCCCTGCTCATGAAGCAG
AACCCCCTTGTCACTGACCTCGCCCTCTACGACATCCGCGGTGGACCTGA
TGTTCGCTGCTCGTCAGTCCCTCAACCTCCTCCAGAAGCGTAGCTTCTCC
GCTTCTGCCAGCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016615malate dehydrogenase activity
GO:0003824catalytic activity
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0030060L-malate dehydrogenase activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0006108malate metabolic process
GO:0005975carbohydrate metabolic process
GO:0019752carboxylic acid metabolic process
GO:0006099tricarboxylic acid cycle
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MDH1KJC3_004702Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004702-T1KJC3_004702-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004702-T1.cdsKJC3_004702-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004702-T1.utr3p1KJC3_004702-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004702-T1.exon5KJC3_004702-T1.exon5Aspergillus niger KJC3exon
KJC3_004702-T1.exon4KJC3_004702-T1.exon4Aspergillus niger KJC3exon
KJC3_004702-T1.exon3KJC3_004702-T1.exon3Aspergillus niger KJC3exon
KJC3_004702-T1.exon2KJC3_004702-T1.exon2Aspergillus niger KJC3exon
KJC3_004702-T1.exon1KJC3_004702-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004702-T1.utr5p1KJC3_004702-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR001252
DBxrefInterPro:IPR022383
DBxrefInterPro:IPR015955
DBxrefInterPro:IPR001557
DBxrefInterPro:IPR010097
DBxrefInterPro:IPR001236
DBxrefPFAM:PF00056
DBxrefPFAM:PF02866
Product cytoplasmic
ProductMalate dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:454598..456301 -
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