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KJC3_004703-T1, KJC3_004703-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004703-T1
Unique NameKJC3_004703-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:456614..458100-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004703-T1 ID=KJC3_004703-T1|Name=KJC3_004703-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1487bp|location=Sequence derived from alignment at ch4:456614..458100- (Aspergillus niger KJC3)
GTGGCCTTGGCTAGCATCATTATAAGCCTGATATAGAAGGTCTCTCCTGA
CACGTCGCTATTTCTTGGTACCGACTACTACACATTTCAGAGACAAACTT
AAGATTTTCTTTTTCTTCTTGGAAAGATATTAGTACCTGTAAATCCAAGC
TCACCTCTGTTTTTGCGGCCGGGATTGTATACAGCGCACTCACCCGATAG
GGTACACCGCAACAAAATGGTAAGTCGTCTAAGGCCTCAAAAGTGAAGCC
TCGCTTTGAGGGGGTTGATTGCCATGCCTGATGGGTGCTTACATTGTCTA
TTGCTTAGAATTCCCTCTTCAATTCCGCCCTCAAGCAGTCATCTGCTATC
CGCCGTGACCTGGATACCTTTTCCCAATCTCCAGCTACCTCATCTGCCGC
ACTACAAGGTAGGTTTCGAAACCGGTGCTTGTAGTGGCTCCACTACGCAA
CAGAAGGAAGCTCATGCGCATTGTAGGCCAAATCGCTGCATCGCTAGCAT
CGTTATCGCGCACCGTTGACGACTACTCTGCCCTGTCCAAGAAGGAATTG
ATTCCGGAGAAGCAAGAGAAGGCATTCGAACGAGTCAAGAATTTCCGATC
AGAACTGGCAGATTACCGGCAACACTTTGATCGACTACGGAAAGAACGAG
AGGAAGCTGTAAGAATTTGCACTCAAATCTTCAAGCAGCGTTGAGACTCG
ATATGGCTGACCATGGTTTATCTATAGCAATCCGTCACCAACCGCAATGA
GCTCCTCGGTCGACGTCCCCATCACACAGCTACACCAGAGAACCCATATG
CTCAATCATCCCTCCCCCAGTCCTCTGCGTTCGGCCCTTCTTCGTCACGA
TCGGGGCTCAGCTTTGGAGCCTCGCCAGCCGACTACAACCGGGAAACACA
TGCGCTTCGCGAACAAAGCTTCCTAGCGAGCACCAACACCCAGATTGATG
AGTTTCTTGATCGGGGTCGTGCTGTGCTTGCGGATCTGGGACAGCAGCGT
GAAGTACTGAAGGGCACACAACGTCGACTCTACAGCGTTGCAAACACACT
GGGCGTCAGCGGCGACACAATCCGCAAGGTTGAGCGCCGCGCAAGACAAG
ACAAGTGGATCTTCTGGGGTGGTGTAGTCCTATTCTTCCTGTTCTGCTGG
GCTGTCCTGCACTTCTTGCGATAGTTGTGGTACATATTCCTTTTCCTCTC
CTTTATATTGTTTTTTTGCTTTTACCTGTTCCCTTTCTGGGACTATTGTG
TTTTGGTGCTTGGGTTGTCTTACAAGCGCAGGCGTTTGGAGCGCATTGGC
AGGGGGGCTTATTGCGCATTATTGTATGTACTTAAGTGTGGATGTGGTGA
TGGCTAGTAGTCTATATGTAGTCCCTGCAGCAGGACTGATTAGCTTCGCT
GTCCCCGTGCGCAATGGGATTTGGGTTGAGTGTGGAGTACACCGAAGTAG
TGTGCCGTAGACAGGGAGACGGACGGGTAGATGGAAC
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Coding sequence (CDS) from alignment at ch4:456614..458100-

>KJC3_004703-T1 ID=KJC3_004703-T1|Name=KJC3_004703-T1|organism=Aspergillus niger KJC3|type=CDS|length=2928bp|location=Sequence derived from alignment at ch4:456614..458100- (Aspergillus niger KJC3)
CAATCCGTCACCAACCGCAATGAGCTCCTCGGTCGACGTCCCCATCACAC
AGCTACACCAGAGAACCCATATGCTCAATCATCCCTCCCCCAGTCCTCTG
CGTTCGGCCCTTCTTCGTCACGATCGGGGCTCAGCTTTGGAGCCTCGCCA
GCCGACTACAACCGGGAAACACATGCGCTTCGCGAACAAAGCTTCCTAGC
GAGCACCAACACCCAGATTGATGAGTTTCTTGATCGGGGTCGTGCTGTGC
TTGCGGATCTGGGACAGCAGCGTGAAGTACTGAAGGGCACACAACGTCGA
CTCTACAGCGTTGCAAACACACTGGGCGTCAGCGGCGACACAATCCGCAA
GGTTGAGCGCCGCGCAAGACAAGACAAGTGGATCTTCTGGGGTGGTGTAG
TCCTATTCTTCCTGTTCTGCTGGGCTGTCCTGCACTTCTTGCGATAGGCC
AAATCGCTGCATCGCTAGCATCGTTATCGCGCACCGTTGACGACTACTCT
GCCCTGTCCAAGAAGGAATTGATTCCGGAGAAGCAAGAGAAGGCATTCGA
ACGAGTCAAGAATTTCCGATCAGAACTGGCAGATTACCGGCAACACTTTG
ATCGACTACGGAAAGAACGAGAGGAAGCTAATTCCCTCTTCAATTCCGCC
CTCAAGCAGTCATCTGCTATCCGCCGTGACCTGGATACCTTTTCCCAATC
TCCAGCTACCTCATCTGCCGCACTACAAGATGCAATCCGTCACCAACCGC
AATGAGCTCCTCGGTCGACGTCCCCATCACACAGCTACACCAGAGAACCC
ATATGCTCAATCATCCCTCCCCCAGTCCTCTGCGTTCGGCCCTTCTTCGT
CACGATCGGGGCTCAGCTTTGGAGCCTCGCCAGCCGACTACAACCGGGAA
ACACATGCGCTTCGCGAACAAAGCTTCCTAGCGAGCACCAACACCCAGAT
TGATGAGTTTCTTGATCGGGGTCGTGCTGTGCTTGCGGATCTGGGACAGC
AGCGTGAAGTACTGAAGGGCACACAACGTCGACTCTACAGCGTTGCAAAC
ACACTGGGCGTCAGCGGCGACACAATCCGCAAGGTTGAGCGCCGCGCAAG
ACAAGACAAGTGGATCTTCTGGGGTGGTGTAGTCCTATTCTTCCTGTTCT
GCTGGGCTGTCCTGCACTTCTTGCGATAGGCCAAATCGCTGCATCGCTAG
CATCGTTATCGCGCACCGTTGACGACTACTCTGCCCTGTCCAAGAAGGAA
TTGATTCCGGAGAAGCAAGAGAAGGCATTCGAACGAGTCAAGAATTTCCG
ATCAGAACTGGCAGATTACCGGCAACACTTTGATCGACTACGGAAAGAAC
GAGAGGAAGCTAATTCCCTCTTCAATTCCGCCCTCAAGCAGTCATCTGCT
ATCCGCCGTGACCTGGATACCTTTTCCCAATCTCCAGCTACCTCATCTGC
CGCACTACAAGATGCAATCCGTCACCAACCGCAATGAGCTCCTCGGTCGA
CGTCCCCATCACACAGCTACACCAGAGAACCCATATGCTCAATCATCCCT
CCCCCAGTCCTCTGCGTTCGGCCCTTCTTCGTCACGATCGGGGCTCAGCT
TTGGAGCCTCGCCAGCCGACTACAACCGGGAAACACATGCGCTTCGCGAA
CAAAGCTTCCTAGCGAGCACCAACACCCAGATTGATGAGTTTCTTGATCG
GGGTCGTGCTGTGCTTGCGGATCTGGGACAGCAGCGTGAAGTACTGAAGG
GCACACAACGTCGACTCTACAGCGTTGCAAACACACTGGGCGTCAGCGGC
GACACAATCCGCAAGGTTGAGCGCCGCGCAAGACAAGACAAGTGGATCTT
CTGGGGTGGTGTAGTCCTATTCTTCCTGTTCTGCTGGGCTGTCCTGCACT
TCTTGCGATAGGCCAAATCGCTGCATCGCTAGCATCGTTATCGCGCACCG
TTGACGACTACTCTGCCCTGTCCAAGAAGGAATTGATTCCGGAGAAGCAA
GAGAAGGCATTCGAACGAGTCAAGAATTTCCGATCAGAACTGGCAGATTA
CCGGCAACACTTTGATCGACTACGGAAAGAACGAGAGGAAGCTAATTCCC
TCTTCAATTCCGCCCTCAAGCAGTCATCTGCTATCCGCCGTGACCTGGAT
ACCTTTTCCCAATCTCCAGCTACCTCATCTGCCGCACTACAAGATGCAAT
CCGTCACCAACCGCAATGAGCTCCTCGGTCGACGTCCCCATCACACAGCT
ACACCAGAGAACCCATATGCTCAATCATCCCTCCCCCAGTCCTCTGCGTT
CGGCCCTTCTTCGTCACGATCGGGGCTCAGCTTTGGAGCCTCGCCAGCCG
ACTACAACCGGGAAACACATGCGCTTCGCGAACAAAGCTTCCTAGCGAGC
ACCAACACCCAGATTGATGAGTTTCTTGATCGGGGTCGTGCTGTGCTTGC
GGATCTGGGACAGCAGCGTGAAGTACTGAAGGGCACACAACGTCGACTCT
ACAGCGTTGCAAACACACTGGGCGTCAGCGGCGACACAATCCGCAAGGTT
GAGCGCCGCGCAAGACAAGACAAGTGGATCTTCTGGGGTGGTGTAGTCCT
ATTCTTCCTGTTCTGCTGGGCTGTCCTGCACTTCTTGCGATAGGCCAAAT
CGCTGCATCGCTAGCATCGTTATCGCGCACCGTTGACGACTACTCTGCCC
TGTCCAAGAAGGAATTGATTCCGGAGAAGCAAGAGAAGGCATTCGAACGA
GTCAAGAATTTCCGATCAGAACTGGCAGATTACCGGCAACACTTTGATCG
ACTACGGAAAGAACGAGAGGAAGCTAATTCCCTCTTCAATTCCGCCCTCA
AGCAGTCATCTGCTATCCGCCGTGACCTGGATACCTTTTCCCAATCTCCA
GCTACCTCATCTGCCGCACTACAAGATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005794Golgi apparatus
Vocabulary: Molecular Function
TermDefinition
GO:0005484SNAP receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004703KJC3_004703Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004703-T1KJC3_004703-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004703-T1.cdsKJC3_004703-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004703-T1.utr3p1KJC3_004703-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004703-T1.exon4KJC3_004703-T1.exon4Aspergillus niger KJC3exon
KJC3_004703-T1.exon3KJC3_004703-T1.exon3Aspergillus niger KJC3exon
KJC3_004703-T1.exon2KJC3_004703-T1.exon2Aspergillus niger KJC3exon
KJC3_004703-T1.exon1KJC3_004703-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004703-T1.utr5p1KJC3_004703-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027027
DBxrefPFAM:PF12352
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:456614..458100 -
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