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KJC3_004704-T1, KJC3_004704-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004704-T1
Unique NameKJC3_004704-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:458403..459458-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004704-T1 ID=KJC3_004704-T1|Name=KJC3_004704-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1056bp|location=Sequence derived from alignment at ch4:458403..459458- (Aspergillus niger KJC3)
CCTACCTCGATACTTTCCCGTGCGTCACCCTATTACAGCTTATTTCATCG
TCACTTTGCATCTCTAAAATCTATCTGTACGTTTGTTTGGTCCCTGGGTA
GTTGCTAAGTCCTCTTGGTCTTGGCATACCTCCAACTTAGATGCGCCTAC
TGATGACGTCCTAGATCACTTGTTCCTCTCAAGTCACACGAATCACTTAT
TCATCATGTCTTACGCAGAAGCCGCTGCCAAAGGTCCCAAGCAATCTGCA
GAGGAGGTATGTCTTCAGTCACTCCCCCGCCTAGCGTCCAGTGCTTGTAC
TATACCACTCTAGATGCAGATCCGCTAACACTATGGACAGGCGTAAGTCA
ACACTAAAACAGAACAAACAAACCCTTTCATGCAGCTAACAATTGTGTAG
CCGGGCCCCCAGCGTTGGCGGAGTGTACCGCGATGAAGCTGAGAGCACCG
CTTCCCTGGTCGACGTCGATTCGCCACATGTCCAAGCCGTGGATCCCGAT
TTCCTGAAGCAGAACGTGCAAACCACCACCCAGGCTGAGCGGATAGAGCG
AGAAGAAGAGGAGCGGGAAGCCTACGAAGAACGGAAGGCGAAGAGCAAGG
CTAAGGCTAAAGCCAAGGCGAAGGCTAGTTCGGTCCGCAGCAACGCGCAC
AACCCTGTCTACCTCGGAAATGCTGTGCTTCTGGCCTTGACTGGCGCTGG
TCTGGGGTATGGAGCATACCGGAAGCATGCTGCTGGGCAGCTTTCGTGGG
AGTTGATTGGATGGTGCTCTGGCGCCGTTGGTGCCTTTGGTGCTGTGGAC
TACTTTGTTAGCAAGTGAGTATCGGTCTTAGAAGCTCGTGTGCGGTGATA
GTGTTTGCTAATGTGGGGACGTTCTTTAGATGGCTTTTGCAGAACAAGTA
CCCTCCGAAATAAGGCCTGAAGTTGAGACCGAGCACTTTGTGGCAGTCGT
GATATCCCAGTGTCAGTTTCGCGGTCTATTATTTCTTTACTGTTTTTTTG
TACTCCTTTAGGGTACATGAGGCGTTTGCGCAGCTTTTGGGCGTCATAGT
GTGTCT
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Coding sequence (CDS) from alignment at ch4:458403..459458-

>KJC3_004704-T1 ID=KJC3_004704-T1|Name=KJC3_004704-T1|organism=Aspergillus niger KJC3|type=CDS|length=2004bp|location=Sequence derived from alignment at ch4:458403..459458- (Aspergillus niger KJC3)
ATGGCTTTTGCAGAACAAGTACCCTCCGAAATAACCGGGCCCCCAGCGTT
GGCGGAGTGTACCGCGATGAAGCTGAGAGCACCGCTTCCCTGGTCGACGT
CGATTCGCCACATGTCCAAGCCGTGGATCCCGATTTCCTGAAGCAGAACG
TGCAAACCACCACCCAGGCTGAGCGGATAGAGCGAGAAGAAGAGGAGCGG
GAAGCCTACGAAGAACGGAAGGCGAAGAGCAAGGCTAAGGCTAAAGCCAA
GGCGAAGGCTAGTTCGGTCCGCAGCAACGCGCACAACCCTGTCTACCTCG
GAAATGCTGTGCTTCTGGCCTTGACTGGCGCTGGTCTGGGGTATGGAGCA
TACCGGAAGCATGCTGCTGGGCAGCTTTCGTGGGAGTTGATTGGATGGTG
CTCTGGCGCCGTTGGTGCCTTTGGTGCTGTGGACTACTTTGTTAGCAAGC
ATGTCTTACGCAGAAGCCGCTGCCAAAGGTCCCAAGCAATCTGCAGAGGA
GATGGCTTTTGCAGAACAAGTACCCTCCGAAATAACCGGGCCCCCAGCGT
TGGCGGAGTGTACCGCGATGAAGCTGAGAGCACCGCTTCCCTGGTCGACG
TCGATTCGCCACATGTCCAAGCCGTGGATCCCGATTTCCTGAAGCAGAAC
GTGCAAACCACCACCCAGGCTGAGCGGATAGAGCGAGAAGAAGAGGAGCG
GGAAGCCTACGAAGAACGGAAGGCGAAGAGCAAGGCTAAGGCTAAAGCCA
AGGCGAAGGCTAGTTCGGTCCGCAGCAACGCGCACAACCCTGTCTACCTC
GGAAATGCTGTGCTTCTGGCCTTGACTGGCGCTGGTCTGGGGTATGGAGC
ATACCGGAAGCATGCTGCTGGGCAGCTTTCGTGGGAGTTGATTGGATGGT
GCTCTGGCGCCGTTGGTGCCTTTGGTGCTGTGGACTACTTTGTTAGCAAG
CATGTCTTACGCAGAAGCCGCTGCCAAAGGTCCCAAGCAATCTGCAGAGG
AGATGGCTTTTGCAGAACAAGTACCCTCCGAAATAACCGGGCCCCCAGCG
TTGGCGGAGTGTACCGCGATGAAGCTGAGAGCACCGCTTCCCTGGTCGAC
GTCGATTCGCCACATGTCCAAGCCGTGGATCCCGATTTCCTGAAGCAGAA
CGTGCAAACCACCACCCAGGCTGAGCGGATAGAGCGAGAAGAAGAGGAGC
GGGAAGCCTACGAAGAACGGAAGGCGAAGAGCAAGGCTAAGGCTAAAGCC
AAGGCGAAGGCTAGTTCGGTCCGCAGCAACGCGCACAACCCTGTCTACCT
CGGAAATGCTGTGCTTCTGGCCTTGACTGGCGCTGGTCTGGGGTATGGAG
CATACCGGAAGCATGCTGCTGGGCAGCTTTCGTGGGAGTTGATTGGATGG
TGCTCTGGCGCCGTTGGTGCCTTTGGTGCTGTGGACTACTTTGTTAGCAA
GCATGTCTTACGCAGAAGCCGCTGCCAAAGGTCCCAAGCAATCTGCAGAG
GAGATGGCTTTTGCAGAACAAGTACCCTCCGAAATAACCGGGCCCCCAGC
GTTGGCGGAGTGTACCGCGATGAAGCTGAGAGCACCGCTTCCCTGGTCGA
CGTCGATTCGCCACATGTCCAAGCCGTGGATCCCGATTTCCTGAAGCAGA
ACGTGCAAACCACCACCCAGGCTGAGCGGATAGAGCGAGAAGAAGAGGAG
CGGGAAGCCTACGAAGAACGGAAGGCGAAGAGCAAGGCTAAGGCTAAAGC
CAAGGCGAAGGCTAGTTCGGTCCGCAGCAACGCGCACAACCCTGTCTACC
TCGGAAATGCTGTGCTTCTGGCCTTGACTGGCGCTGGTCTGGGGTATGGA
GCATACCGGAAGCATGCTGCTGGGCAGCTTTCGTGGGAGTTGATTGGATG
GTGCTCTGGCGCCGTTGGTGCCTTTGGTGCTGTGGACTACTTTGTTAGCA
AGCATGTCTTACGCAGAAGCCGCTGCCAAAGGTCCCAAGCAATCTGCAGA
GGAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004704KJC3_004704Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004704-T1KJC3_004704-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004704-T1.cdsKJC3_004704-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004704-T1.utr3p1KJC3_004704-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004704-T1.exon5KJC3_004704-T1.exon5Aspergillus niger KJC3exon
KJC3_004704-T1.exon4KJC3_004704-T1.exon4Aspergillus niger KJC3exon
KJC3_004704-T1.exon3KJC3_004704-T1.exon3Aspergillus niger KJC3exon
KJC3_004704-T1.exon2KJC3_004704-T1.exon2Aspergillus niger KJC3exon
KJC3_004704-T1.exon1KJC3_004704-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004704-T1.utr5p2KJC3_004704-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_004704-T1.utr5p1KJC3_004704-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR039453
DBxrefPFAM:PF17304
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:458403..459458 -
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