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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:511375..513045+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004724-T1 ID=KJC3_004724-T1|Name=KJC3_004724-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1671bp|location=Sequence derived from alignment at ch4:511375..513045+ (Aspergillus niger KJC3)
CCCTGCTTTGTTGCCCCTTTTCATGAGTCCTCATATTCCCATCAACCTAT
AATGCATTCGTTGCCTTCTGCTTTGCCCACCAGCCTCTGTTATTGTGTGC
CGACTGCAATAAAAACCAGCGGTATATAGAGAATGTCTTTGAATCCCCTC
TCATCAATTGCTCTTCAAACTGCCGTGGTGGTGACCACGCTCGGCTTTAC
CCCGGCTCAGTCAAGCCTGAGGCCTGGTGCATTGGTAATCGTTGCACTAT
GTACTGGCCACTGTATCTCCATCGCATTGGAATACTTCATTCGAACACCA
TGGGCCAGCCTTGCAGGCGGCTATTCGGTCATGTTACTGCTTCACTATAT
CGACATTGGCTTGTTGACGCGGTGGGAATTTGTCGACCCCTCACAAGCGA
AATCGCCCGAGACGCTAAAGCCAACCTGGGCCCGGCTGCGGTTTGGCGTC
TGGGCGGCCTTCAACGCGCGATGCATTGGGACGCCTGAACAGGTACACAA
CGTCCCTGAGGCCGTAACCCGCGAGCGAACCGCATTTCTCTGTCGATCTG
CGGGGATTATTCTCCTTAGTTATCTGGGCCTTGATGTGCTTGGGTCAATG
GGTGATCCGGAGGTAGGATCTCGCTTCCTCAATGCATCTTGTGTGCCATT
CTTTCGGAGACTCTCCGAAATCACTGCAGAAGAGACCGCAATTCGAATCT
TTTCTGGCATTGCGGCTGGTATAGGTCTGTTGGCCAGTCAGGGAGGCTTC
TATTATCTCTTCGCTTTCACCAGCGTTCTTCTGAGGTGGAGTAAGCCGCA
GGACTGGCCTCCTTTTTATGGAGACTTAGCGGATGCGTATAGCCTGCAAA
GGCTTTGGAGGTAGGCAACCCTTCTTATGCGTATTCTAGGCCAAAATGGA
ACTGATATCCCATCTAGTCGCGTGTGGCACCAATCCAATTCCCATAAATT
CCGTGCAATCTCTCGCTTTTTCGCTCGTGATGTCTTTCGCTTCCAACCAG
GGACTCTCGCCGACCGATATGCCAAAGTTGTGATGGTGTTTGCAACCTCA
GCATTCATGCACTTTCTCATTGACCTGTCGTCGGGGCTATCGTCCTCTAG
CTCTGGGGCTATGCAGTTCTTCTGCACGCAGGCCCTCGGATTAATGATGG
AGGATTTTGCTGTCAATGCTTACTTTGTTCTACGTGGCGGGCCGTCCCGC
AATTGGAAAGCTTCTCGCGGCGAACGGTTGATCGGATATCTTTGGGTTGG
TGGCTTTTTGGTCTGGTCGTTTCCTGCATATCTTTATCCGATGTTGTATC
GCTCTAACGCGGGCCTTAATGACTCGGTGGTCCCGGTGAGCGTTGTCGGG
ATGCTGCAAGGCAGTTCTTGAACCTGTTACGGCAAAGGCGGATATTCCAG
CGCTCAGCATCGCGGTACTCCTTGAACGTAGGACTCAGCATGCTTGAGGG
TGGAGTGATTCGAGGGCGTTCCGGGTCATATTCTTTTCTTCAAACGGTGA
AGCACCTGCATAGCTAGCATATTACTTAGCGGGCTCGATCAGACTTCCAA
AATATTAATTGGATTGGAATGAAGATGACGGCGCACTTCTCCTCGTTGGC
TAGGCCAACAACTTTAGCTCGTACACAATGGCACTAATATCAGTATTCAC
GTTAGCTACACACTCTCGGAC back to topCoding sequence (CDS) from alignment at ch4:511375..513045+ >KJC3_004724-T1 ID=KJC3_004724-T1|Name=KJC3_004724-T1|organism=Aspergillus niger KJC3|type=CDS|length=2364bp|location=Sequence derived from alignment at ch4:511375..513045+ (Aspergillus niger KJC3)
ATGTCTTTGAATCCCCTCTCATCAATTGCTCTTCAAACTGCCGTGGTGGT
GACCACGCTCGGCTTTACCCCGGCTCAGTCAAGCCTGAGGCCTGGTGCAT
TGGTAATCGTTGCACTATGTACTGGCCACTGTATCTCCATCGCATTGGAA
TACTTCATTCGAACACCATGGGCCAGCCTTGCAGGCGGCTATTCGGTCAT
GTTACTGCTTCACTATATCGACATTGGCTTGTTGACGCGGTGGGAATTTG
TCGACCCCTCACAAGCGAAATCGCCCGAGACGCTAAAGCCAACCTGGGCC
CGGCTGCGGTTTGGCGTCTGGGCGGCCTTCAACGCGCGATGCATTGGGAC
GCCTGAACAGGTACACAACGTCCCTGAGGCCGTAACCCGCGAGCGAACCG
CATTTCTCTGTCGATCTGCGGGGATTATTCTCCTTAGTTATCTGGGCCTT
GATGTGCTTGGGTCAATGGGTGATCCGGAGGTAGGATCTCGCTTCCTCAA
TGCATCTTGTGTGCCATTCTTTCGGAGACTCTCCGAAATCACTGCAGAAG
AGACCGCAATTCGAATCTTTTCTGGCATTGCGGCTGGTATAGGTCTGTTG
GCCAGTCAGGGAGGCTTCTATTATCTCTTCGCTTTCACCAGCGTTCTTCT
GAGGTGGAGTAAGCCGCAGGACTGGCCTCCTTTTTATGGAGACTTAGCGG
ATGCGTATAGCCTGCAAAGGCTTTGGAGTCGCGTGTGGCACCAATCCAAT
TCCCATAAATTCCGTGCAATCTCTCGCTTTTTCGCTCGTGATGTCTTTCG
CTTCCAACCAGGGACTCTCGCCGACCGATATGCCAAAGTTGTGATGGTGT
TTGCAACCTCAGCATTCATGCACTTTCTCATTGACCTGTCGTCGGGGCTA
TCGTCCTCTAGCTCTGGGGCTATGCAGTTCTTCTGCACGCAGGCCCTCGG
ATTAATGATGGAGGATTTTGCTGTCAATGCTTACTTTGTTCTACGTGGCG
GGCCGTCCCGCAATTGGAAAGCTTCTCGCGGCGAACGGTTGATCGGATAT
CTTTGGGTTGGTGGCTTTTTGGTCTGGTCGTTTCCTGCATATCTTTATCC
GATGTTGTATCGCTCTAACGCGGGCCTTAATGACTCGGTGGTCCCGGTGA
GCGTTGTCGGGATGCTGCAAGGCAGTTCTTGAATGTCTTTGAATCCCCTC
TCATCAATTGCTCTTCAAACTGCCGTGGTGGTGACCACGCTCGGCTTTAC
CCCGGCTCAGTCAAGCCTGAGGCCTGGTGCATTGGTAATCGTTGCACTAT
GTACTGGCCACTGTATCTCCATCGCATTGGAATACTTCATTCGAACACCA
TGGGCCAGCCTTGCAGGCGGCTATTCGGTCATGTTACTGCTTCACTATAT
CGACATTGGCTTGTTGACGCGGTGGGAATTTGTCGACCCCTCACAAGCGA
AATCGCCCGAGACGCTAAAGCCAACCTGGGCCCGGCTGCGGTTTGGCGTC
TGGGCGGCCTTCAACGCGCGATGCATTGGGACGCCTGAACAGGTACACAA
CGTCCCTGAGGCCGTAACCCGCGAGCGAACCGCATTTCTCTGTCGATCTG
CGGGGATTATTCTCCTTAGTTATCTGGGCCTTGATGTGCTTGGGTCAATG
GGTGATCCGGAGGTAGGATCTCGCTTCCTCAATGCATCTTGTGTGCCATT
CTTTCGGAGACTCTCCGAAATCACTGCAGAAGAGACCGCAATTCGAATCT
TTTCTGGCATTGCGGCTGGTATAGGTCTGTTGGCCAGTCAGGGAGGCTTC
TATTATCTCTTCGCTTTCACCAGCGTTCTTCTGAGGTGGAGTAAGCCGCA
GGACTGGCCTCCTTTTTATGGAGACTTAGCGGATGCGTATAGCCTGCAAA
GGCTTTGGAGTCGCGTGTGGCACCAATCCAATTCCCATAAATTCCGTGCA
ATCTCTCGCTTTTTCGCTCGTGATGTCTTTCGCTTCCAACCAGGGACTCT
CGCCGACCGATATGCCAAAGTTGTGATGGTGTTTGCAACCTCAGCATTCA
TGCACTTTCTCATTGACCTGTCGTCGGGGCTATCGTCCTCTAGCTCTGGG
GCTATGCAGTTCTTCTGCACGCAGGCCCTCGGATTAATGATGGAGGATTT
TGCTGTCAATGCTTACTTTGTTCTACGTGGCGGGCCGTCCCGCAATTGGA
AAGCTTCTCGCGGCGAACGGTTGATCGGATATCTTTGGGTTGGTGGCTTT
TTGGTCTGGTCGTTTCCTGCATATCTTTATCCGATGTTGTATCGCTCTAA
CGCGGGCCTTAATGACTCGGTGGTCCCGGTGAGCGTTGTCGGGATGCTGC
AAGGCAGTTCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004724-T1.utr5p1 | KJC3_004724-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004724-T1.utr3p1 | KJC3_004724-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032805 |
| DBxref | PFAM:PF13813 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:511375..513045 + |
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