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KJC3_004749-T1, KJC3_004749-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004749-T1
Unique NameKJC3_004749-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:596107..598628+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004749-T1 ID=KJC3_004749-T1|Name=KJC3_004749-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2522bp|location=Sequence derived from alignment at ch4:596107..598628+ (Aspergillus niger KJC3)
AGGCATTCCACCACACACCATCCTTTCACCCTTTTCTTCAATGTTTCTCG
TTTTTTTGCCTGTTCGTACCCAGTCTCGTACTTCCCCAACCTCCTGGCCC
TCGTCTTGGGGGGTGAAGCCTCAAAGTTCCTTCCCTTTGTCATCCTTGAC
ACGCTTCATCTTGTCTTCCTCGCTCTCTCTCTCGCTCTCTTTCCTTCGGG
ACTCTAGGTCTCGTGAATTGACCTCCCACCCATAGACTTAGACATTCCTC
CCCCAACCTTTTCTTCCTCGACGCGACTAAAGCCTCAATTGATCTTTTTT
AATCCTCGTCCACCCCTCCTGCCGTTGTTCGAGTGGCATACGAGCGTGTC
CGGGTCGTGGTTCACGACCAGACGGCCTTACTTTAACTTAATAGCATCAT
GGAGTCTTCGCCTCCAAGGAGCAGTTTGGCTGCTCCTGTGGCAGGCGTGA
AGCGTCCCGCGGCCCTGTTGCCTGCCTTTGAGCCATTGAGCTCCTCTCCC
TCACTTCCTCGTCCACAGAAGCGTGTAGCACGCGACAATCATGGCATTGT
CTCGACTTACCCTACGCCGGTGCCGACCTCGTCGACCCATATCTTGTCCT
CCTCCCCCCCGAGAATGGCCCTGCCGCGAACGGCCTCACGGCGTACATTT
ACTTCGTCCAGCTCCGAACGAACCCCTCTGTCTGCTGTCCCTACCATAAT
GCTTCCCGAGAGCGGGGAGCCCGTCCTGATGGGAAGATCCAGTGCCTCGT
GCCATCACCAGCTCGCGGCCAACCGTATGATATCAAGGGTGCATGTCAAG
GCCACATATAAACCCGCAGCTAATCCCTTTGACCCTGACAGAGTGGAAAT
CATGTGCATGGGATGGAATGGAATCAAATTGCATTGTCAAGGGAAAACAT
ATGATTTGGCCAAGGGGAAGACGTTTACCTCGGATATCAAGGATGCTGAC
ATCATGATTGATGTTCATGACGCCCGCGTGCTGGTCCAGTGGCCTCAAAG
TGACCGAAAGGATTATGCCTCGACGGATTCCGAGCAGACATGGGAGGAGA
CTACGCCCAAACGTAAAGCACAGTCCCGTCGGAGTATTCACGAAAGCCCC
AATGTGGAACGTCAGCGCTTGGCGTCTCCCGTCTCGCCGTCTCCTGCGGT
CAAGTCTCTGGTGCCCCCATCGTCGCCCATATATACCCCAACACGCTCGC
GGAATTCTGTGGTTGTATACGAAGATTCGCCTAGCCGTCGCAACAGCACT
GCTGATGCAGATCAGAAGTCATCGTCCATCGCTAGTGACATTCTCCAGAG
CTCGCAGTCCAGCGAGTTGAGCGAACTGAGCAAGCAAGATGACTTCTCGG
ATCATGATGAAGAAAATGACCCCATTGTTCATTCCTTTGGACCATTTGGT
GACAATCTGCTTCCTCGGATGGCCTCATTCACTGCAGATGAGTCTCCACT
CCGTCCTGCACGGCCCCGCAACCAGGTTGTCCAGCCTACCAAGTCCCCGA
GACAACCATCCAAGACCGTCGAGTCCACCGAGAGCACAGTAACCAAGCTC
GAGCCGTTGAGCGAGAGCTTTGAACGTGTTCAGAACCATGCCGCCAACCA
ATTGGCGTTCTCTCGACTCTCGTCCACGCCATTTTCGACGATCTTGAATA
ACCTCCCACCGTCCTTATGGAGGCGGGACGGCCATCACAAAGAGGGCCCC
ACGAAAGAAGAGATCCGTGCCATCCTGGACACGACCAAGTGCATTGGAAA
GGTGGCACGGGAAGGAAAGGATGCCGCAGGAAAGCCTCTGGAAAGCGAGT
ACTATTACATTCCTGACTTTGATGAGGACGACATGCGACGCGAAGCGGTC
GTGCATGATCTCAGGAAGCCAGGCCTCCGCAACTGCCGCAAGCAGCATAA
GGTACGTGCATTCCTCCTCAAACAAAATGACTTGTAGCTGACCTTAGCAG
CAATACTTCTGGCGCAAACCCAAATAAACAATAAAAAGTCATTCGATCCC
TGCTAATATCTTGATACGACCTTCTTGGATTCTGAGTACATATTTGCAAC
GTTACCCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCAAGGACTCGCA
TAGCGTGGCGTGGGCATACCCTGTCGATTTTTTTGTTGCTGAATGAAGGT
GTATGATGATGTGGATTTCTTTCCTTTGTTGTGTTCTGTTAACGGTCCCC
CAAGCCAGATGTATTGTTCTGTCCACGTGCGATGTCTACTGTGTTTCCTT
TTGTGGCGGCATTGACCATTACGAGTCAGGGTCTCTGTCCATGCCTCATG
GTGTAGACCTTGCTTTTCTGTGGGCGCTCGAGACCAGACCCGTGTCTTGT
GTGACGTCCGTCAACGAATCCCCATCTGAAAAATTTCCTTTGATGTTGTC
CAATGCGCTGTTGGCAAGATGCCCATCAGCCTTGGGACCCTCAACCAACC
CAACCCAACCCCAACCCTCATGACCTGTATGTTATCACAGTTTCTTAGGG
AAACAAAAGCGTTTAGTTTATG
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Coding sequence (CDS) from alignment at ch4:596107..598628+

>KJC3_004749-T1 ID=KJC3_004749-T1|Name=KJC3_004749-T1|organism=Aspergillus niger KJC3|type=CDS|length=3060bp|location=Sequence derived from alignment at ch4:596107..598628+ (Aspergillus niger KJC3)
ATGGAGTCTTCGCCTCCAAGGAGCAGTTTGGCTGCTCCTGTGGCAGGCGT
GAAGCGTCCCGCGGCCCTGTTGCCTGCCTTTGAGCCATTGAGCTCCTCTC
CCTCACTTCCTCGTCCACAGAAGCGTGTAGCACGCGACAATCATGGCATT
GTCTCGACTTACCCTACGCCGGTGCCGACCTCGTCGACCCATATCTTGTC
CTCCTCCCCCCCGAGAATGGCCCTGCCGCGAACGGCCTCACGGCGTACAT
TTACTTCGTCCAGCTCCGAACGAACCCCTCTGTCTGCTGTCCCTACCATA
ATGCTTCCCGAGAGCGGGGAGCCCGTCCTGATGGGAAGATCCAGTGCCTC
GTGCCATCACCAGCTCGCGGCCAACCGTATGATATCAAGGGTGCATGTCA
AGGCCACATATAAACCCGCAGCTAATCCCTTTGACCCTGACAGAGTGGAA
ATCATGTGCATGGGATGGAATGGAATCAAATTGCATTGTCAAGGGAAAAC
ATATGATTTGGCCAAGGGGAAGACGTTTACCTCGGATATCAAGGATGCTG
ACATCATGATTGATGTTCATGACGCCCGCGTGCTGGTCCAGTGGCCTCAA
AGTGACCGAAAGGATTATGCCTCGACGGATTCCGAGCAGACATGGGAGGA
GACTACGCCCAAACGTAAAGCACAGTCCCGTCGGAGTATTCACGAAAGCC
CCAATGTGGAACGTCAGCGCTTGGCGTCTCCCGTCTCGCCGTCTCCTGCG
GTCAAGTCTCTGGTGCCCCCATCGTCGCCCATATATACCCCAACACGCTC
GCGGAATTCTGTGGTTGTATACGAAGATTCGCCTAGCCGTCGCAACAGCA
CTGCTGATGCAGATCAGAAGTCATCGTCCATCGCTAGTGACATTCTCCAG
AGCTCGCAGTCCAGCGAGTTGAGCGAACTGAGCAAGCAAGATGACTTCTC
GGATCATGATGAAGAAAATGACCCCATTGTTCATTCCTTTGGACCATTTG
GTGACAATCTGCTTCCTCGGATGGCCTCATTCACTGCAGATGAGTCTCCA
CTCCGTCCTGCACGGCCCCGCAACCAGGTTGTCCAGCCTACCAAGTCCCC
GAGACAACCATCCAAGACCGTCGAGTCCACCGAGAGCACAGTAACCAAGC
TCGAGCCGTTGAGCGAGAGCTTTGAACGTGTTCAGAACCATGCCGCCAAC
CAATTGGCGTTCTCTCGACTCTCGTCCACGCCATTTTCGACGATCTTGAA
TAACCTCCCACCGTCCTTATGGAGGCGGGACGGCCATCACAAAGAGGGCC
CCACGAAAGAAGAGATCCGTGCCATCCTGGACACGACCAAGTGCATTGGA
AAGGTGGCACGGGAAGGAAAGGATGCCGCAGGAAAGCCTCTGGAAAGCGA
GTACTATTACATTCCTGACTTTGATGAGGACGACATGCGACGCGAAGCGG
TCGTGCATGATCTCAGGAAGCCAGGCCTCCGCAACTGCCGCAAGCAGCAT
AAGCAATACTTCTGGCGCAAACCCAAATAAATGGAGTCTTCGCCTCCAAG
GAGCAGTTTGGCTGCTCCTGTGGCAGGCGTGAAGCGTCCCGCGGCCCTGT
TGCCTGCCTTTGAGCCATTGAGCTCCTCTCCCTCACTTCCTCGTCCACAG
AAGCGTGTAGCACGCGACAATCATGGCATTGTCTCGACTTACCCTACGCC
GGTGCCGACCTCGTCGACCCATATCTTGTCCTCCTCCCCCCCGAGAATGG
CCCTGCCGCGAACGGCCTCACGGCGTACATTTACTTCGTCCAGCTCCGAA
CGAACCCCTCTGTCTGCTGTCCCTACCATAATGCTTCCCGAGAGCGGGGA
GCCCGTCCTGATGGGAAGATCCAGTGCCTCGTGCCATCACCAGCTCGCGG
CCAACCGTATGATATCAAGGGTGCATGTCAAGGCCACATATAAACCCGCA
GCTAATCCCTTTGACCCTGACAGAGTGGAAATCATGTGCATGGGATGGAA
TGGAATCAAATTGCATTGTCAAGGGAAAACATATGATTTGGCCAAGGGGA
AGACGTTTACCTCGGATATCAAGGATGCTGACATCATGATTGATGTTCAT
GACGCCCGCGTGCTGGTCCAGTGGCCTCAAAGTGACCGAAAGGATTATGC
CTCGACGGATTCCGAGCAGACATGGGAGGAGACTACGCCCAAACGTAAAG
CACAGTCCCGTCGGAGTATTCACGAAAGCCCCAATGTGGAACGTCAGCGC
TTGGCGTCTCCCGTCTCGCCGTCTCCTGCGGTCAAGTCTCTGGTGCCCCC
ATCGTCGCCCATATATACCCCAACACGCTCGCGGAATTCTGTGGTTGTAT
ACGAAGATTCGCCTAGCCGTCGCAACAGCACTGCTGATGCAGATCAGAAG
TCATCGTCCATCGCTAGTGACATTCTCCAGAGCTCGCAGTCCAGCGAGTT
GAGCGAACTGAGCAAGCAAGATGACTTCTCGGATCATGATGAAGAAAATG
ACCCCATTGTTCATTCCTTTGGACCATTTGGTGACAATCTGCTTCCTCGG
ATGGCCTCATTCACTGCAGATGAGTCTCCACTCCGTCCTGCACGGCCCCG
CAACCAGGTTGTCCAGCCTACCAAGTCCCCGAGACAACCATCCAAGACCG
TCGAGTCCACCGAGAGCACAGTAACCAAGCTCGAGCCGTTGAGCGAGAGC
TTTGAACGTGTTCAGAACCATGCCGCCAACCAATTGGCGTTCTCTCGACT
CTCGTCCACGCCATTTTCGACGATCTTGAATAACCTCCCACCGTCCTTAT
GGAGGCGGGACGGCCATCACAAAGAGGGCCCCACGAAAGAAGAGATCCGT
GCCATCCTGGACACGACCAAGTGCATTGGAAAGGTGGCACGGGAAGGAAA
GGATGCCGCAGGAAAGCCTCTGGAAAGCGAGTACTATTACATTCCTGACT
TTGATGAGGACGACATGCGACGCGAAGCGGTCGTGCATGATCTCAGGAAG
CCAGGCCTCCGCAACTGCCGCAAGCAGCATAAGCAATACTTCTGGCGCAA
ACCCAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004749KJC3_004749Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004749-T1.utr5p1KJC3_004749-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004749-T1.exon1KJC3_004749-T1.exon1Aspergillus niger KJC3exon
KJC3_004749-T1.exon2KJC3_004749-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004749-T1.cdsKJC3_004749-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004749-T1.utr3p1KJC3_004749-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004749-T1KJC3_004749-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR000253
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:596107..598628 +
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