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KJC3_004754-T1, KJC3_004754-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004754-T1
Unique NameKJC3_004754-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:607851..609275+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004754-T1 ID=KJC3_004754-T1|Name=KJC3_004754-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1425bp|location=Sequence derived from alignment at ch4:607851..609275+ (Aspergillus niger KJC3)
GTTGTTATCACCGAACTCAACCAAATTTTCGCGGGACCGCAACACCCCTC
ACCCCACCAGACTATCTTATCATCCACTTCCTAGCTACTGCCTACTCCTA
ACATAGTAAATCTATTCATATATCTACTACTGATACTACTGAAGCTACTC
ATATACCCACCCCCCAACTTATACCATCCAACCCAACACGCAGTGATCTC
ATGGCCAACCCCAGGATAATGACCTGGGACCCAACCCAATTCTTCCGGAC
GGAAGAAGGCCTTCCCCCGAGTCCCTACGCCCTGCTCATCCTCAACCATC
CAATCAACGAGAGAGCATATGATGTTTTACGAAAGCATGGTATTACCACC
ATATCCTTTACACCCTATATCATATTCCATACAGAAGAATGTATACTGAA
TAAAAGGATAGCACTAACAACCGTCTGCGCCGACGGTGGCGCCAACCACT
TCTACGAGATGATGAAAGCGCGGGGGAGAGAGGATGTAGATGTATGTATA
CACGCACCATATCCATATCCATGTTCATTGTCCATGCTATACATATGCTC
CATACTATACCCATCTATATGCATGCAAATATCCTTCTGGATAGGAAGTA
TAGTACCACACTACATACACCATCACAATAATCCCTATACAATGAAATAA
CTAATAATAATAAATCCAGCACCCCACCACCATAATCGGCGACCTCGACT
CCATCCACCCAGACATAAAATCCCACTACCAGTCCCACGGAGTAAACGTC
ATCTACCACCACGACGACTACAGCACCGATTTCACCAAAGCGCTGCGGTA
CATTCGCGCCAACACCAGCGAAATCTTATCCTCATCTGCTGCATCATCCA
CCCCTGACCATGACCAAGCAAACAACACCCATCAACAATACAATCAAGAT
GACAGTCTCTCAATATTAATCCTCGGCGGCCTCGGTGGCCGCGTCGACCA
GGCATTTTCGCAGATACATCATTTGTATTCTAACTCTACTATTCCCTCCT
CCCCCTCCTCTAGTTCTTCTACTGAAGAAGCACGGAAAAGAGGAGAAGGG
GCATTATACCTCGTCTCTGAAGAAAGTATCACGTTTATTCTGCATCCGGG
GAAGAATGTCATTCGCACGCCGGGGGTTAAGAGGGGTGATATACCATCGT
CGTCATCATCTTTTTCGTCGGACTCAGGTGGCATCAAGGAAAGGGAAGAA
GGGTATTATCTCCTTGAAGAAAACGTGGGCATCATCCCCCTCTCCGGGAT
GGAGCGGATCACGACAAAAGGATTTCAGTGGGATGTGGAATCCTGGGCGA
CGGAGATCGGGGGCCAGATTAGTACGAGTAATCATATCCGGGCGGAGGAG
GTGGAGGTTACGGCTGGGGGAGCGGTGTTGTTTACGGTGGAGTTGGCGGG
GAGGTTTAAGCGGATTTCTTCTTAG
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Coding sequence (CDS) from alignment at ch4:607851..609275+

>KJC3_004754-T1 ID=KJC3_004754-T1|Name=KJC3_004754-T1|organism=Aspergillus niger KJC3|type=CDS|length=2925bp|location=Sequence derived from alignment at ch4:607851..609275+ (Aspergillus niger KJC3)
ATGGCCAACCCCAGGATAATGACCTGGGACCCAACCCAATTCTTCCGGAC
GGAAGAAGGCCTTCCCCCGAGTCCCTACGCCCTGCTCATCCTCAACCATC
CAATCAACGAGAGAGCATATGATGTTTTACGAAAGCATGCACTAACAACC
GTCTGCGCCGACGGTGGCGCCAACCACTTCTACGAGATGATGAAAGCGCG
GGGGAGAGAGGATGTAGATCACCCCACCACCATAATCGGCGACCTCGACT
CCATCCACCCAGACATAAAATCCCACTACCAGTCCCACGGAGTAAACGTC
ATCTACCACCACGACGACTACAGCACCGATTTCACCAAAGCGCTGCGGTA
CATTCGCGCCAACACCAGCGAAATCTTATCCTCATCTGCTGCATCATCCA
CCCCTGACCATGACCAAGCAAACAACACCCATCAACAATACAATCAAGAT
GACAGTCTCTCAATATTAATCCTCGGCGGCCTCGGTGGCCGCGTCGACCA
GGCATTTTCGCAGATACATCATTTGTATTCTAACTCTACTATTCCCTCCT
CCCCCTCCTCTAGTTCTTCTACTGAAGAAGCACGGAAAAGAGGAGAAGGG
GCATTATACCTCGTCTCTGAAGAAAGTATCACGTTTATTCTGCATCCGGG
GAAGAATGTCATTCGCACGCCGGGGGTTAAGAGGGGTGATATACCATCGT
CGTCATCATCTTTTTCGTCGGACTCAGGTGGCATCAAGGAAAGGGAAGAA
GGGTATTATCTCCTTGAAGAAAACGTGGGCATCATCCCCCTCTCCGGGAT
GGAGCGGATCACGACAAAAGGATTTCAGTGGGATGTGGAATCCTGGGCGA
CGGAGATCGGGGGCCAGATTAGTACGAGTAATCATATCCGGGCGGAGGAG
GTGGAGGTTACGGCTGGGGGAGCGGTGTTGTTTACGGTGGAGTTGGCGGG
GAGGTTTAAGCGGATTTCTTCTTAGATGGCCAACCCCAGGATAATGACCT
GGGACCCAACCCAATTCTTCCGGACGGAAGAAGGCCTTCCCCCGAGTCCC
TACGCCCTGCTCATCCTCAACCATCCAATCAACGAGAGAGCATATGATGT
TTTACGAAAGCATGCACTAACAACCGTCTGCGCCGACGGTGGCGCCAACC
ACTTCTACGAGATGATGAAAGCGCGGGGGAGAGAGGATGTAGATCACCCC
ACCACCATAATCGGCGACCTCGACTCCATCCACCCAGACATAAAATCCCA
CTACCAGTCCCACGGAGTAAACGTCATCTACCACCACGACGACTACAGCA
CCGATTTCACCAAAGCGCTGCGGTACATTCGCGCCAACACCAGCGAAATC
TTATCCTCATCTGCTGCATCATCCACCCCTGACCATGACCAAGCAAACAA
CACCCATCAACAATACAATCAAGATGACAGTCTCTCAATATTAATCCTCG
GCGGCCTCGGTGGCCGCGTCGACCAGGCATTTTCGCAGATACATCATTTG
TATTCTAACTCTACTATTCCCTCCTCCCCCTCCTCTAGTTCTTCTACTGA
AGAAGCACGGAAAAGAGGAGAAGGGGCATTATACCTCGTCTCTGAAGAAA
GTATCACGTTTATTCTGCATCCGGGGAAGAATGTCATTCGCACGCCGGGG
GTTAAGAGGGGTGATATACCATCGTCGTCATCATCTTTTTCGTCGGACTC
AGGTGGCATCAAGGAAAGGGAAGAAGGGTATTATCTCCTTGAAGAAAACG
TGGGCATCATCCCCCTCTCCGGGATGGAGCGGATCACGACAAAAGGATTT
CAGTGGGATGTGGAATCCTGGGCGACGGAGATCGGGGGCCAGATTAGTAC
GAGTAATCATATCCGGGCGGAGGAGGTGGAGGTTACGGCTGGGGGAGCGG
TGTTGTTTACGGTGGAGTTGGCGGGGAGGTTTAAGCGGATTTCTTCTTAG
ATGGCCAACCCCAGGATAATGACCTGGGACCCAACCCAATTCTTCCGGAC
GGAAGAAGGCCTTCCCCCGAGTCCCTACGCCCTGCTCATCCTCAACCATC
CAATCAACGAGAGAGCATATGATGTTTTACGAAAGCATGCACTAACAACC
GTCTGCGCCGACGGTGGCGCCAACCACTTCTACGAGATGATGAAAGCGCG
GGGGAGAGAGGATGTAGATCACCCCACCACCATAATCGGCGACCTCGACT
CCATCCACCCAGACATAAAATCCCACTACCAGTCCCACGGAGTAAACGTC
ATCTACCACCACGACGACTACAGCACCGATTTCACCAAAGCGCTGCGGTA
CATTCGCGCCAACACCAGCGAAATCTTATCCTCATCTGCTGCATCATCCA
CCCCTGACCATGACCAAGCAAACAACACCCATCAACAATACAATCAAGAT
GACAGTCTCTCAATATTAATCCTCGGCGGCCTCGGTGGCCGCGTCGACCA
GGCATTTTCGCAGATACATCATTTGTATTCTAACTCTACTATTCCCTCCT
CCCCCTCCTCTAGTTCTTCTACTGAAGAAGCACGGAAAAGAGGAGAAGGG
GCATTATACCTCGTCTCTGAAGAAAGTATCACGTTTATTCTGCATCCGGG
GAAGAATGTCATTCGCACGCCGGGGGTTAAGAGGGGTGATATACCATCGT
CGTCATCATCTTTTTCGTCGGACTCAGGTGGCATCAAGGAAAGGGAAGAA
GGGTATTATCTCCTTGAAGAAAACGTGGGCATCATCCCCCTCTCCGGGAT
GGAGCGGATCACGACAAAAGGATTTCAGTGGGATGTGGAATCCTGGGCGA
CGGAGATCGGGGGCCAGATTAGTACGAGTAATCATATCCGGGCGGAGGAG
GTGGAGGTTACGGCTGGGGGAGCGGTGTTGTTTACGGTGGAGTTGGCGGG
GAGGTTTAAGCGGATTTCTTCTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006772thiamine metabolic process
GO:0009229thiamine diphosphate biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004788thiamine diphosphokinase activity
GO:0030975thiamine binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004754KJC3_004754Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004754-T1.utr5p1KJC3_004754-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004754-T1.exon1KJC3_004754-T1.exon1Aspergillus niger KJC3exon
KJC3_004754-T1.exon2KJC3_004754-T1.exon2Aspergillus niger KJC3exon
KJC3_004754-T1.exon3KJC3_004754-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004754-T1.cdsKJC3_004754-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004754-T1KJC3_004754-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036371
DBxrefInterPro:IPR007371
DBxrefInterPro:IPR016966
DBxrefInterPro:IPR006282
DBxrefInterPro:IPR036759
DBxrefInterPro:IPR007373
DBxrefPFAM:PF04263
DBxrefPFAM:PF04265
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:607851..609275 +
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