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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:609606..611022- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004755-T1 ID=KJC3_004755-T1|Name=KJC3_004755-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1417bp|location=Sequence derived from alignment at ch4:609606..611022- (Aspergillus niger KJC3)
GGTTACTTCTCACTGGTACTATTACTCCTCCTCCCCTGTTCGTCTCTTGT
TTACCTTGTTACCCTTGTTTACCTTTCCCACTACTACCACTACTTCCTCC
TCTTCCTCCCCTCCCTATCTTCCCTATCTATATACCCTTATATCTAGTAT
TACCCACCCACCCTATCTTTATCCCTTGCACTTGTGCCACTGGTCGCATG
GTCTAACGTGGATCCCGTACCCGCGCGAATCGTCATGCCTACCGGATTGC
CTTATTTGCAGAAACTGCGCAAGCCCCAACTTACAGAATGGGCGGAGCTC
ACTGACCTCCAGGAGTAAGCAGCTCCCCATGTCCATGATGACTGGCGTTG
CGCCGTGCCGCGCGCGCACACCCCCCTCCTCTCTCTCTCTCTTCTAACAA
AGCAATAGCTATGAGGACTTGACAAAACCCGACCTCGCTGCCGCTCTGGA
CAGCCATCTCCAAGCCAACGAGTCCATCTTCAAAACTGACGCGCGCCTGG
CCGATTATTACCGGCGACTGTCGCAATCCCCGCGCGTTTACTCCCCCACC
AAGAGAGCTCCCAAGGTCGAAGCCTCCCCGACCCCGGATGAAGCTCCTCG
ATCCGTGCGCCGAAGGCAGGTGAAGGCCAAGGTGGAGCGCGAGCCTACGT
ATGATAACCTCGCATTGTCGCGACTATTTTCGCTAACTTCCCACAGAGAA
GAGTCCGAGCCTCAGACCCCCGGGCAAGTGGTGGGCGTGCAGCCGCCAAC
GATGTCATCGCTGGTGTCGGAGCTACCGCCCTCGCCGGCGGTGGTTACCG
ACGTGATTGATCGCCAGACAGCCGCGTGGGGCAAGTCCGTTAGCGAACTG
TGGTCGGAAACGGGTGTGCACGAGCGCACCGAGTCGCTCCGCTCCAACCT
TAGCAGTGTCAAGGCCTTTGGCACGTTGATATTATCGGTCGAAGCCCTGA
ACGTATTGCGGGCTGTTGTGCCCAAGAATTACGTGGGCACCGTCCCCATG
CCCCCGTGGACGCATGTCTCGGACTTGGAGATCGCCATTCCGGACCTTTT
CGTGCTGGTCGAGGGGCATTTCTGGGCTGTTGTCTCGCTGTGGGCGTTGA
TTAGTGCGGCGCTGCCTTTTACTGTCGCGTACTTTTTCAATCTTAGCTTG
CAGGCTGCGCAGGCTGGGTCGTCCTCTACGCATACGCGTCGCAGTCGCTC
GGGCGTTCATGCGAGCTTTGATCCGTTGAGCTTCTATATTGCCAAGGCGG
TGATCACGTATTTGGTGTATACGGAGCAGTTTACCTTTTGGGGCACTTAC
CAGGGGTTGACGATTGATCGGTTGGAGGGGTCTGTTCCCGGGGGGTTGAA
TGGGGCGTTGGCGGGGTGTGCTATTGGAGTGATTGGGACTTTGTATGAAG
CTATTCTGAGGAAGTGA back to topCoding sequence (CDS) from alignment at ch4:609606..611022- >KJC3_004755-T1 ID=KJC3_004755-T1|Name=KJC3_004755-T1|organism=Aspergillus niger KJC3|type=CDS|length=3123bp|location=Sequence derived from alignment at ch4:609606..611022- (Aspergillus niger KJC3)
AGAAGAGTCCGAGCCTCAGACCCCCGGGCAAGTGGTGGGCGTGCAGCCGC
CAACGATGTCATCGCTGGTGTCGGAGCTACCGCCCTCGCCGGCGGTGGTT
ACCGACGTGATTGATCGCCAGACAGCCGCGTGGGGCAAGTCCGTTAGCGA
ACTGTGGTCGGAAACGGGTGTGCACGAGCGCACCGAGTCGCTCCGCTCCA
ACCTTAGCAGTGTCAAGGCCTTTGGCACGTTGATATTATCGGTCGAAGCC
CTGAACGTATTGCGGGCTGTTGTGCCCAAGAATTACGTGGGCACCGTCCC
CATGCCCCCGTGGACGCATGTCTCGGACTTGGAGATCGCCATTCCGGACC
TTTTCGTGCTGGTCGAGGGGCATTTCTGGGCTGTTGTCTCGCTGTGGGCG
TTGATTAGTGCGGCGCTGCCTTTTACTGTCGCGTACTTTTTCAATCTTAG
CTTGCAGGCTGCGCAGGCTGGGTCGTCCTCTACGCATACGCGTCGCAGTC
GCTCGGGCGTTCATGCGAGCTTTGATCCGTTGAGCTTCTATATTGCCAAG
GCGGTGATCACGTATTTGGTGTATACGGAGCAGTTTACCTTTTGGGGCAC
TTACCAGGGGTTGACGATTGATCGGTTGGAGGGGTCTGTTCCCGGGGGGT
TGAATGGGGCGTTGGCGGGGTGTGCTATTGGAGTGATTGGGACTTTGTAT
GAAGCTATTCTGAGGAAGTGACTATGAGGACTTGACAAAACCCGACCTCG
CTGCCGCTCTGGACAGCCATCTCCAAGCCAACGAGTCCATCTTCAAAACT
GACGCGCGCCTGGCCGATTATTACCGGCGACTGTCGCAATCCCCGCGCGT
TTACTCCCCCACCAAGAGAGCTCCCAAGGTCGAAGCCTCCCCGACCCCGG
ATGAAGCTCCTCGATCCGTGCGCCGAAGGCAGGTGAAGGCCAAGGTGGAG
CGCGAGCCTACATGCCTACCGGATTGCCTTATTTGCAGAAACTGCGCAAG
CCCCAACTTACAGAATGGGCGGAGCTCACTGACCTCCAGGAAGAAGAGTC
CGAGCCTCAGACCCCCGGGCAAGTGGTGGGCGTGCAGCCGCCAACGATGT
CATCGCTGGTGTCGGAGCTACCGCCCTCGCCGGCGGTGGTTACCGACGTG
ATTGATCGCCAGACAGCCGCGTGGGGCAAGTCCGTTAGCGAACTGTGGTC
GGAAACGGGTGTGCACGAGCGCACCGAGTCGCTCCGCTCCAACCTTAGCA
GTGTCAAGGCCTTTGGCACGTTGATATTATCGGTCGAAGCCCTGAACGTA
TTGCGGGCTGTTGTGCCCAAGAATTACGTGGGCACCGTCCCCATGCCCCC
GTGGACGCATGTCTCGGACTTGGAGATCGCCATTCCGGACCTTTTCGTGC
TGGTCGAGGGGCATTTCTGGGCTGTTGTCTCGCTGTGGGCGTTGATTAGT
GCGGCGCTGCCTTTTACTGTCGCGTACTTTTTCAATCTTAGCTTGCAGGC
TGCGCAGGCTGGGTCGTCCTCTACGCATACGCGTCGCAGTCGCTCGGGCG
TTCATGCGAGCTTTGATCCGTTGAGCTTCTATATTGCCAAGGCGGTGATC
ACGTATTTGGTGTATACGGAGCAGTTTACCTTTTGGGGCACTTACCAGGG
GTTGACGATTGATCGGTTGGAGGGGTCTGTTCCCGGGGGGTTGAATGGGG
CGTTGGCGGGGTGTGCTATTGGAGTGATTGGGACTTTGTATGAAGCTATT
CTGAGGAAGTGACTATGAGGACTTGACAAAACCCGACCTCGCTGCCGCTC
TGGACAGCCATCTCCAAGCCAACGAGTCCATCTTCAAAACTGACGCGCGC
CTGGCCGATTATTACCGGCGACTGTCGCAATCCCCGCGCGTTTACTCCCC
CACCAAGAGAGCTCCCAAGGTCGAAGCCTCCCCGACCCCGGATGAAGCTC
CTCGATCCGTGCGCCGAAGGCAGGTGAAGGCCAAGGTGGAGCGCGAGCCT
ACATGCCTACCGGATTGCCTTATTTGCAGAAACTGCGCAAGCCCCAACTT
ACAGAATGGGCGGAGCTCACTGACCTCCAGGAAGAAGAGTCCGAGCCTCA
GACCCCCGGGCAAGTGGTGGGCGTGCAGCCGCCAACGATGTCATCGCTGG
TGTCGGAGCTACCGCCCTCGCCGGCGGTGGTTACCGACGTGATTGATCGC
CAGACAGCCGCGTGGGGCAAGTCCGTTAGCGAACTGTGGTCGGAAACGGG
TGTGCACGAGCGCACCGAGTCGCTCCGCTCCAACCTTAGCAGTGTCAAGG
CCTTTGGCACGTTGATATTATCGGTCGAAGCCCTGAACGTATTGCGGGCT
GTTGTGCCCAAGAATTACGTGGGCACCGTCCCCATGCCCCCGTGGACGCA
TGTCTCGGACTTGGAGATCGCCATTCCGGACCTTTTCGTGCTGGTCGAGG
GGCATTTCTGGGCTGTTGTCTCGCTGTGGGCGTTGATTAGTGCGGCGCTG
CCTTTTACTGTCGCGTACTTTTTCAATCTTAGCTTGCAGGCTGCGCAGGC
TGGGTCGTCCTCTACGCATACGCGTCGCAGTCGCTCGGGCGTTCATGCGA
GCTTTGATCCGTTGAGCTTCTATATTGCCAAGGCGGTGATCACGTATTTG
GTGTATACGGAGCAGTTTACCTTTTGGGGCACTTACCAGGGGTTGACGAT
TGATCGGTTGGAGGGGTCTGTTCCCGGGGGGTTGAATGGGGCGTTGGCGG
GGTGTGCTATTGGAGTGATTGGGACTTTGTATGAAGCTATTCTGAGGAAG
TGACTATGAGGACTTGACAAAACCCGACCTCGCTGCCGCTCTGGACAGCC
ATCTCCAAGCCAACGAGTCCATCTTCAAAACTGACGCGCGCCTGGCCGAT
TATTACCGGCGACTGTCGCAATCCCCGCGCGTTTACTCCCCCACCAAGAG
AGCTCCCAAGGTCGAAGCCTCCCCGACCCCGGATGAAGCTCCTCGATCCG
TGCGCCGAAGGCAGGTGAAGGCCAAGGTGGAGCGCGAGCCTACATGCCTA
CCGGATTGCCTTATTTGCAGAAACTGCGCAAGCCCCAACTTACAGAATGG
GCGGAGCTCACTGACCTCCAGGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004755-T1.utr5p1 | KJC3_004755-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:609606..611022 - |
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