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KJC3_004757-T1, KJC3_004757-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004757-T1
Unique NameKJC3_004757-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:613464..615501-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004757-T1 ID=KJC3_004757-T1|Name=KJC3_004757-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2038bp|location=Sequence derived from alignment at ch4:613464..615501- (Aspergillus niger KJC3)
TCTCCAACTGCACCAGAAACCGTTCCCTTCAAGGCCAAAACCCACCGCCG
TCCCCGCCCAGCCTCCCTTCCAAGTGGATATCCATCTGCTTCCACCGCTC
AATTAGTTTCCCCGATATTCTTTCTTCGTTCCTTCTCCTCCTTTTCCCTT
TTCCTCCTCATCTATTGCTGTTGGCTGCTCCAGTGCCGCACCGCCGTTCC
ACACCCCCCCGGTATCTCGGCCCTTTCTTCTTGCCAACGACCCTCCCTAC
ATTCCTGCTTCTTCACCCGACTTTCCGAGACAAGCGATCGCAATGGCCCC
TGCTCCGCCCGCTAATCTGCCTCTGCCTGAGAGACTCAAGGCTCTGGCTC
AAACACTGCAGTATGTGTCGCATGTCCCGGAACTGACAACTGGTACTGAC
GAGGTCTCTTCTTCTACTTAGATTTGCTTGGTTCGCTGGGTAGGTTATAG
CTCCGCCATGTTTCAGCCTGCCTGTTCTGTTTGACGACGTTTCATCATAC
AATGAAATCACTTGTCCTGGGCCTATCCAGCAGGACTTGCCCACTGGACC
ATCCCTCGCCAGCTCTCGCTTTGAACGGTCGGACCGAGCATATTCGCTAA
CGCACCATAGGCATGTGACGCTGCTCCTTTCGGTCTTCCGCTATGTCCTG
TCCTACATTACGTTCAACTACTACTCCTCGTCGGCGCAGGTAGCTTACCG
CCTTGCGTTTGTTTCCGCTGCCGCGACATACGGAATTGTGGTCTACAAGG
GACACATTGCCCGTGGCCGTCTCCAGGGCAGTGTTCCCAACATTGCGCTG
AAGCTGGCTGGTGATGAAAATGTCCAGTACCTCGGTAAGTGATGGTGTGA
TCGAGTAGCGAAGACAACGATACTGATAAGCAGTAACCAGGTATGGCACT
GGTCTGGCTCTACTCGCGCCAGATCCCGTTGGCCCTGCTTCCTTTCAGCG
TCTACTCCATCTTCCATGTTGCGACTTACACTCGTGCCCACCTGATTCCC
ACCATCCAGGGCCCCGCTCCTGGTGCTGCCCCCGGCTCTCCTGCTTCTCC
TAGCGGTCCCAAGCCCGCCGCCAGACCTTCTCCCTTGGCCGATACCATTG
GACGGTTTGTCAAGCAGTACTATGACGCCAGCATGCACCTGGTCGCTCAG
CTGGAGATGTCTCTTCTCCTCCGCTTGGCCGTGGGCATCCTCACCTTCTC
CAAGGGTAGCTTTGTGCTCTTCTTCTTCTACCTGGCCTTCTTCCGCGCCA
GATACTCCCAGAGCTCCTTTGTCCAGCAGGCGGTCCGCCACTTCATCGCC
AGAGTTGATGCTTCGGTTTCCCACCAGAGCACCCCCCCTGCGGTTCGCCA
GGGATGGGAGTCCTTCAAGGCTGCCGTGGGCCAGGCCTACGAGGCTACGG
ATCTCAACCGTATGAGCTCCGGTGCTGCGAAGAAGCCCCAATAGAGGGCC
ATCAGGAGTGGTTCAGGACGTTCAGGATATACAACGGAATTGGTGAACTG
CCCCGTGATCCTACGTGCATGATTGGGTTTTTGGGAGCCGTTTTGTTCTG
GACACCGATCATTGAGCCTGATGTGCAGGTAATGAATCTCCACGGCCAGC
GATATCATCCTGGCTGAGGAGCACGGCCCTTTGATGAACAATGAAGGTTG
TTAATAGTGGAGGGGAGACGAAGCGAGACTTGGGAGTAGCATCCGGGATG
GTATTTCTAATTGCTCGTGGGGGGAGTACACGGGAGGAAAGGTTACGTGA
AATGTCTCAGCAAGTTTTTCTTTTCTGTCCTTGAATACGTCTCATTGTTA
TATATTCCAATGCGACAGTATAATGTTAGTGGCTGTCGTACTCTGCCTTC
CTACCGGATTATGAGGGACTATGGAGCCGTAGGATCGGAATTAGCCTTTG
GAGAGAGTCGGCGTCGGCGGGTCCGATTTAGACTTCCGATCGAGGCGCGG
AATTGTGTTGCAGTTGGCCACGGCTCAGTCAGCGCGTAAGCAGCGCAGCG
ATAGGCGGATTGGCCGGCGGAAGCTTTATGAGACTGGG
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Coding sequence (CDS) from alignment at ch4:613464..615501-

>KJC3_004757-T1 ID=KJC3_004757-T1|Name=KJC3_004757-T1|organism=Aspergillus niger KJC3|type=CDS|length=3456bp|location=Sequence derived from alignment at ch4:613464..615501- (Aspergillus niger KJC3)
GTATGGCACTGGTCTGGCTCTACTCGCGCCAGATCCCGTTGGCCCTGCTT
CCTTTCAGCGTCTACTCCATCTTCCATGTTGCGACTTACACTCGTGCCCA
CCTGATTCCCACCATCCAGGGCCCCGCTCCTGGTGCTGCCCCCGGCTCTC
CTGCTTCTCCTAGCGGTCCCAAGCCCGCCGCCAGACCTTCTCCCTTGGCC
GATACCATTGGACGGTTTGTCAAGCAGTACTATGACGCCAGCATGCACCT
GGTCGCTCAGCTGGAGATGTCTCTTCTCCTCCGCTTGGCCGTGGGCATCC
TCACCTTCTCCAAGGGTAGCTTTGTGCTCTTCTTCTTCTACCTGGCCTTC
TTCCGCGCCAGATACTCCCAGAGCTCCTTTGTCCAGCAGGCGGTCCGCCA
CTTCATCGCCAGAGTTGATGCTTCGGTTTCCCACCAGAGCACCCCCCCTG
CGGTTCGCCAGGGATGGGAGTCCTTCAAGGCTGCCGTGGGCCAGGCCTAC
GAGGCTACGGATCTCAACCGTATGAGCTCCGGTGCTGCGAAGAAGCCCCA
ATAGGCATGTGACGCTGCTCCTTTCGGTCTTCCGCTATGTCCTGTCCTAC
ATTACGTTCAACTACTACTCCTCGTCGGCGCAGGTAGCTTACCGCCTTGC
GTTTGTTTCCGCTGCCGCGACATACGGAATTGTGGTCTACAAGGGACACA
TTGCCCGTGGCCGTCTCCAGGGCAGTGTTCCCAACATTGCGCTGAAGCTG
GCTGGTGATGAAAATGTCCAGTACCTCGATTTGCTTGGTTCGCTGGATGG
CCCCTGCTCCGCCCGCTAATCTGCCTCTGCCTGAGAGACTCAAGGCTCTG
GCTCAAACACTGCAGTATGGCACTGGTCTGGCTCTACTCGCGCCAGATCC
CGTTGGCCCTGCTTCCTTTCAGCGTCTACTCCATCTTCCATGTTGCGACT
TACACTCGTGCCCACCTGATTCCCACCATCCAGGGCCCCGCTCCTGGTGC
TGCCCCCGGCTCTCCTGCTTCTCCTAGCGGTCCCAAGCCCGCCGCCAGAC
CTTCTCCCTTGGCCGATACCATTGGACGGTTTGTCAAGCAGTACTATGAC
GCCAGCATGCACCTGGTCGCTCAGCTGGAGATGTCTCTTCTCCTCCGCTT
GGCCGTGGGCATCCTCACCTTCTCCAAGGGTAGCTTTGTGCTCTTCTTCT
TCTACCTGGCCTTCTTCCGCGCCAGATACTCCCAGAGCTCCTTTGTCCAG
CAGGCGGTCCGCCACTTCATCGCCAGAGTTGATGCTTCGGTTTCCCACCA
GAGCACCCCCCCTGCGGTTCGCCAGGGATGGGAGTCCTTCAAGGCTGCCG
TGGGCCAGGCCTACGAGGCTACGGATCTCAACCGTATGAGCTCCGGTGCT
GCGAAGAAGCCCCAATAGGCATGTGACGCTGCTCCTTTCGGTCTTCCGCT
ATGTCCTGTCCTACATTACGTTCAACTACTACTCCTCGTCGGCGCAGGTA
GCTTACCGCCTTGCGTTTGTTTCCGCTGCCGCGACATACGGAATTGTGGT
CTACAAGGGACACATTGCCCGTGGCCGTCTCCAGGGCAGTGTTCCCAACA
TTGCGCTGAAGCTGGCTGGTGATGAAAATGTCCAGTACCTCGATTTGCTT
GGTTCGCTGGATGGCCCCTGCTCCGCCCGCTAATCTGCCTCTGCCTGAGA
GACTCAAGGCTCTGGCTCAAACACTGCAGTATGGCACTGGTCTGGCTCTA
CTCGCGCCAGATCCCGTTGGCCCTGCTTCCTTTCAGCGTCTACTCCATCT
TCCATGTTGCGACTTACACTCGTGCCCACCTGATTCCCACCATCCAGGGC
CCCGCTCCTGGTGCTGCCCCCGGCTCTCCTGCTTCTCCTAGCGGTCCCAA
GCCCGCCGCCAGACCTTCTCCCTTGGCCGATACCATTGGACGGTTTGTCA
AGCAGTACTATGACGCCAGCATGCACCTGGTCGCTCAGCTGGAGATGTCT
CTTCTCCTCCGCTTGGCCGTGGGCATCCTCACCTTCTCCAAGGGTAGCTT
TGTGCTCTTCTTCTTCTACCTGGCCTTCTTCCGCGCCAGATACTCCCAGA
GCTCCTTTGTCCAGCAGGCGGTCCGCCACTTCATCGCCAGAGTTGATGCT
TCGGTTTCCCACCAGAGCACCCCCCCTGCGGTTCGCCAGGGATGGGAGTC
CTTCAAGGCTGCCGTGGGCCAGGCCTACGAGGCTACGGATCTCAACCGTA
TGAGCTCCGGTGCTGCGAAGAAGCCCCAATAGGCATGTGACGCTGCTCCT
TTCGGTCTTCCGCTATGTCCTGTCCTACATTACGTTCAACTACTACTCCT
CGTCGGCGCAGGTAGCTTACCGCCTTGCGTTTGTTTCCGCTGCCGCGACA
TACGGAATTGTGGTCTACAAGGGACACATTGCCCGTGGCCGTCTCCAGGG
CAGTGTTCCCAACATTGCGCTGAAGCTGGCTGGTGATGAAAATGTCCAGT
ACCTCGATTTGCTTGGTTCGCTGGATGGCCCCTGCTCCGCCCGCTAATCT
GCCTCTGCCTGAGAGACTCAAGGCTCTGGCTCAAACACTGCAGTATGGCA
CTGGTCTGGCTCTACTCGCGCCAGATCCCGTTGGCCCTGCTTCCTTTCAG
CGTCTACTCCATCTTCCATGTTGCGACTTACACTCGTGCCCACCTGATTC
CCACCATCCAGGGCCCCGCTCCTGGTGCTGCCCCCGGCTCTCCTGCTTCT
CCTAGCGGTCCCAAGCCCGCCGCCAGACCTTCTCCCTTGGCCGATACCAT
TGGACGGTTTGTCAAGCAGTACTATGACGCCAGCATGCACCTGGTCGCTC
AGCTGGAGATGTCTCTTCTCCTCCGCTTGGCCGTGGGCATCCTCACCTTC
TCCAAGGGTAGCTTTGTGCTCTTCTTCTTCTACCTGGCCTTCTTCCGCGC
CAGATACTCCCAGAGCTCCTTTGTCCAGCAGGCGGTCCGCCACTTCATCG
CCAGAGTTGATGCTTCGGTTTCCCACCAGAGCACCCCCCCTGCGGTTCGC
CAGGGATGGGAGTCCTTCAAGGCTGCCGTGGGCCAGGCCTACGAGGCTAC
GGATCTCAACCGTATGAGCTCCGGTGCTGCGAAGAAGCCCCAATAGGCAT
GTGACGCTGCTCCTTTCGGTCTTCCGCTATGTCCTGTCCTACATTACGTT
CAACTACTACTCCTCGTCGGCGCAGGTAGCTTACCGCCTTGCGTTTGTTT
CCGCTGCCGCGACATACGGAATTGTGGTCTACAAGGGACACATTGCCCGT
GGCCGTCTCCAGGGCAGTGTTCCCAACATTGCGCTGAAGCTGGCTGGTGA
TGAAAATGTCCAGTACCTCGATTTGCTTGGTTCGCTGGATGGCCCCTGCT
CCGCCCGCTAATCTGCCTCTGCCTGAGAGACTCAAGGCTCTGGCTCAAAC
ACTGCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004757KJC3_004757Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004757-T1KJC3_004757-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004757-T1.cdsKJC3_004757-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004757-T1.utr3p1KJC3_004757-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004757-T1.exon4KJC3_004757-T1.exon4Aspergillus niger KJC3exon
KJC3_004757-T1.exon3KJC3_004757-T1.exon3Aspergillus niger KJC3exon
KJC3_004757-T1.exon2KJC3_004757-T1.exon2Aspergillus niger KJC3exon
KJC3_004757-T1.exon1KJC3_004757-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004757-T1.utr5p1KJC3_004757-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR005344
DBxrefPFAM:PF03661
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:613464..615501 -
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