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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:632141..636012+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004761-T2 ID=KJC3_004761-T2|Name=KJC3_004761-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3872bp|location=Sequence derived from alignment at ch4:632141..636012+ (Aspergillus niger KJC3)
CTGGAAACTAAATTAGACAGACACTAAAGGCAGGCCCCCCGCTTTTCTTT
TTCGCCCGCTTGCTTGCTTTTCTCTTCCCCCGTCCCGCTCTGTTGGTCGA
TGGGAAAAGGAAAAGGAAAAGGAAGAAAAAAAAGGAAGGGCAGAAAAAGC
GGATGCAGTGAGCTTTGAAGCCGTTCTTTTTTCTCTGCGCCTCTCCTTTT
CGCGCCTCTTTTGCTGCCTTGCGATCGTCCCCCGTTCAGCCTCCTTCGTC
CTCCCTTCCTCTCTCTCGCGCCCTTCCCTCTCTTCTTTTTCCCCAGATAA
TCGCTCTCCGCCTCGGTTGTCGGGCCTAGTCGACTTTAGGGCGCTTTCGG
GCCAGTCTCGCTGGCTGACCTCGACTTGCTCACTTCTCTCTCATTTACCT
CACCCAGAGTTGTTGTTATCGTCGGTTCCCCACTGAGCTCTTTCGGATGC
TGCAGCTCACCTGCCAGCGGTCCCAACCGGTATGCGATCCCGCACAGGCT
GGTACGTCCAACAATAAGACATCACTCCCTCCCCATGTCATATGTGTTGG
GAGATCGGGAACACCCGCCCCGACCTCCTAGCAACAATCACCTTGTCCTT
CTGCTTCTGGCATGTCAAGACACTGACTGTTGGGCCCTCTGCCACACCTA
CCGCAGCCTGACGTGTCGTACCCGGAAACTCAAATGTAGGTCTATAACCT
TGCTTACCATCCCTGCGCTGGGCGGAGATTACAGATGCTAAGAAAAGGTG
CTGGGCTTAGGTGACGAGCAGAAACCCGAATGCTCACAGTGTCGTAAAGG
CGGCAGGGTTTGTCGCCCCAGCGAGGGGATCGTTTTCCGCCATCAGCAAA
ATGCCTCGATGAACAAGGACCTGAGCGATGCCGCCACCGGCCGTGGCACT
CTGAAGGGGTTCTACTCGTATAAGAATACCTTTGACAAGGACAGCGTCTG
GCTCGACATCCCAAAGCATGGTATGGACAAGGAAACCATCCCCGCTGTGA
GTCTTGTTAATCTGACAGGTGCTCTGTCTTCCCTGTAGTCATCTTCGTCG
ATAACTCGGATCCTTATGCGGAAGACCTTGAAGCTGCCCTGGGAGAGTCC
GAAGCCGCCATTTTGGCCGCAAACTCTCATGCGCGTGCTTGGAGTGCTCA
GCGCACGTCGTCCGCTGACGGCGAGACCCATGGCTTGGAGACCCTTTCCA
CGGTGGCAACCACCGATCGCCTTTCTTATCCTCCCTTGAGCATTGATCAA
CAGTCCATCCCGTCAACAGACCACAGCATACCTTATAATAATGTCCCATC
TACAGCATCTTCAGATACTCCAAGCCAGATGCGCGGCGTCATCGCACCTC
AGATCTCTCCCTCTCTCTCGATGTCCTCCAACAATACCAATAATAATAAT
ATCAACTTTCTTCTTAATCCTTCACAATCACGGTCTCCGCCTGTGGATCC
CAGTCTTCAGCATGCACCAGAGCGTAGGAGCTCATCATTGACCGCCAGGC
CACCAGTGCCGCGAGCCACGTCGGCCGATTCGAAGTCGGAGGCACCCGCA
GAAACGGACCACGAGGTTGCGTATCTCCTAAGACATTTTTCAGAGGCACC
AGGACTTTGGTAGGTCACCAAACCACCACCACCACCACCCGGCTGAACAT
TGTTGATGAGATGGATGATAGGATGGATCTGTTCGATTTAGGAACCTATT
TCGCATCGTCCGTGCCGGTTAGAGCTCTCCGAAATCCATTGTTGAAATAC
GCCGCCTGTGCGTATGCTGCGAAGCAACTGGGTCGTGTTAAGGGAACACA
GGTGACAACCGGTGGTGTCTATTCTAGGCATCTCTCCAACAACGTAGATT
GGTCCTGGTCTGGCGCCAAGTATTATGAAAAGGCCATCCAACTCCTAATG
AAAGAATTGCAACCTGATAAAGGACCTCCGCCGCTGAGTACCCCAGAGGC
GTTTGGGCAGTGGCAGGCTGCTGAGTTGTGCGAAGACCAAGAAAACCCTC
GCAAACGCCGCCGCCGTTACTCGGACAGTCGGTTCTCGAAAGGGGTCCAT
TCAGATGAAATTCTTGCTGCCACAGCCATACTATCTGTATATGAGTTTTT
AGATGCCACAGGTCCGGCGTGGAATCGTCACCTGAGCGGCGTGAAGTCCT
TGTTGGATGTAGCGGAGGTAGGAATGATGCCAGTCGAACAGCGCCATTCC
CCCGGGGGAACAGCGTTGCAACAAACCAAGGTTCCGGGGCTCTCGAAGGC
GAGAAAGGCGACCTTCTGGAACTTTGCACGACAAGACTACCTAGCTGCCT
GTGAGTGCATTTATGACCTGCAACAAACGCCCTTAAATGTGCTAACTGGG
TTTCATAGTCATCAATGAGAGCCAGACAAGGTTGAACACGGACGATCTGG
TTTTGTGGACTGAGGCGGGTCTCCAAATCGACAACATGGGCTTTGTACGC
TCCAGTAATGCGACTGCAATAGGCTATCCAGACGGCGAAGAACCCATAAA
GGAAGATCTGGTTTCGAATGGTCTCGTTTGGATTCTCTCAAAGATCGTTA
ACTTTATCAATGCCGGTGATAACGTCCAGTTGAACCACCCTGGCTCGATG
GGGACGGGTCCTCTGGGCCTTTCGCAGCAGGTTTTGCTGGAGCGATGGTA
CCGCCTGGAAGCTGAGCTCGATGCCTGGTACAATGGACTTCCTGAGACGT
TCCAGCCGTGTGCCCGGGTTGACCTGTCCAAATTACCTCAGAATAAGGAT
AACCCGAAGTTTGACGCTGGCTCGCTGTCCGAAATATGGTATAGCTTACC
CCTGTGCTCCTCGGCGATGCAGCATTATCATATGGCTCGTATCCTCCTTC
TCATAAATAAGCCACATGAGTCCACCAGCAGAAGGAGCACCATCGCTGAT
AGGCTTAATTCATATCGCTCGATCGAGAGTGATATTCGATTTCACAGCCG
GGAAATTGTGGGGATTGCGTTGGCTTGTCCAACTGGCGCGGTCCGCATCA
ATTCCCTCCAGCCGCTGTTTGTTAGTGGTCAGTGCCTGACGGAACCCGGA
GAACGGCGGACAGTCCTTGCTTTGCTTCATGGAATCGAAGCGGAACTCGG
CTGGGCAACCGAGTATCGTGTAAACCAGTTGCTCAGAGAATGGGGCTGGA
ACGAGGATGCTGCGAATGCGAGCGTCCCGTGAGGCCTCAAGAGGCAAGAC
AATGCCATGAGTAATGGTGCTCGTCTCTGAGACATTCGAATCAACGAGTC
ATGAGCCACACCTAAGCATACTTGCTTCAGGCCTCGCGATTCTCGCCATC
ACCGTCCATTCAAGTGGAACGAGTCATTTCAAGTCGACGCCAGCGGGACT
TGTAAATATGCGGACCTGCTACATCGACCGCCGCCTAGGACCTGAGACAT
AATCCAGCCTGTCCCAGGCAGGCCAACCCGGAATGGGTTGCATATATGCG
CATCTGTTTTGAGAATCAGCCTGTTGATTTTGAATGATACCAATGTGTTT
TGTGATTTGAACCCATACCGTTGTACCCAGAAACTGCATGAATGCTAATG
CCAGGGAGGAGGCAAGAACGAGGCACCTCTCACTCACTCACTATTATGAC
TTCTTTTCACATCGTGGATATGTGTTTTCCTTCTTGTATCATGAGTCTGT
TTCCAAGCCACATGTTGGCGGTTAGTACGGAGTAGCCATCGAGACAATAT
GACCCCTCTAGCCCATAAGGACACAGCCAACCTAGGAGTAGGAAGACGGG
AAGAAGCTCGAGCGCAGAGGTGGGCAGCAGAAGAAAAGCAGCTAAGAAAG
AGGCCGAGGGCCCTGAGCCTCGAAATTTGCGCCTGGGAATTGATTCGCCG
TCAGACACTCGGCAGAGTTGCC back to topCoding sequence (CDS) from alignment at ch4:632141..636012+ >KJC3_004761-T2 ID=KJC3_004761-T2|Name=KJC3_004761-T2|organism=Aspergillus niger KJC3|type=CDS|length=5202bp|location=Sequence derived from alignment at ch4:632141..636012+ (Aspergillus niger KJC3)
ATGCGCGGCGTCATCGCACCTCAGATCTCTCCCTCTCTCTCGATGTCCTC
CAACAATACCAATAATAATAATATCAACTTTCTTCTTAATCCTTCACAAT
CACGGTCTCCGCCTGTGGATCCCAGTCTTCAGCATGCACCAGAGCGTAGG
AGCTCATCATTGACCGCCAGGCCACCAGTGCCGCGAGCCACGTCGGCCGA
TTCGAAGTCGGAGGCACCCGCAGAAACGGACCACGAGGTTGCGTATCTCC
TAAGACATTTTTCAGAGGCACCAGGACTTTGGATGGATCTGTTCGATTTA
GGAACCTATTTCGCATCGTCCGTGCCGGTTAGAGCTCTCCGAAATCCATT
GTTGAAATACGCCGCCTGTGCGTATGCTGCGAAGCAACTGGGTCGTGTTA
AGGGAACACAGGTGACAACCGGTGGTGTCTATTCTAGGCATCTCTCCAAC
AACGTAGATTGGTCCTGGTCTGGCGCCAAGTATTATGAAAAGGCCATCCA
ACTCCTAATGAAAGAATTGCAACCTGATAAAGGACCTCCGCCGCTGAGTA
CCCCAGAGGCGTTTGGGCAGTGGCAGGCTGCTGAGTTGTGCGAAGACCAA
GAAAACCCTCGCAAACGCCGCCGCCGTTACTCGGACAGTCGGTTCTCGAA
AGGGGTCCATTCAGATGAAATTCTTGCTGCCACAGCCATACTATCTGTAT
ATGAGTTTTTAGATGCCACAGGTCCGGCGTGGAATCGTCACCTGAGCGGC
GTGAAGTCCTTGTTGGATGTAGCGGAGGTAGGAATGATGCCAGTCGAACA
GCGCCATTCCCCCGGGGGAACAGCGTTGCAACAAACCAAGGTTCCGGGGC
TCTCGAAGGCGAGAAAGGCGACCTTCTGGAACTTTGCACGACAAGACTAC
CTAGCTGCCTTCATCAATGAGAGCCAGACAAGGTTGAACACGGACGATCT
GGTTTTGTGGACTGAGGCGGGTCTCCAAATCGACAACATGGGCTTTGTAC
GCTCCAGTAATGCGACTGCAATAGGCTATCCAGACGGCGAAGAACCCATA
AAGGAAGATCTGGTTTCGAATGGTCTCGTTTGGATTCTCTCAAAGATCGT
TAACTTTATCAATGCCGGTGATAACGTCCAGTTGAACCACCCTGGCTCGA
TGGGGACGGGTCCTCTGGGCCTTTCGCAGCAGGTTTTGCTGGAGCGATGG
TACCGCCTGGAAGCTGAGCTCGATGCCTGGTACAATGGACTTCCTGAGAC
GTTCCAGCCGTGTGCCCGGGTTGACCTGTCCAAATTACCTCAGAATAAGG
ATAACCCGAAGTTTGACGCTGGCTCGCTGTCCGAAATATGGTATAGCTTA
CCCCTGTGCTCCTCGGCGATGCAGCATTATCATATGGCTCGTATCCTCCT
TCTCATAAATAAGCCACATGAGTCCACCAGCAGAAGGAGCACCATCGCTG
ATAGGCTTAATTCATATCGCTCGATCGAGAGTGATATTCGATTTCACAGC
CGGGAAATTGTGGGGATTGCGTTGGCTTGTCCAACTGGCGCGGTCCGCAT
CAATTCCCTCCAGCCGCTGTTTGTTAGTGGTCAGTGCCTGACGGAACCCG
GAGAACGGCGGACAGTCCTTGCTTTGCTTCATGGAATCGAAGCGGAACTC
GGCTGGGCAACCGAGTATCGTGTAAACCAGTTGCTCAGAGAATGGGGCTG
GAACGAGGATGCTGCGAATGCGAGCGTCCCGTGAATGCGCGGCGTCATCG
CACCTCAGATCTCTCCCTCTCTCTCGATGTCCTCCAACAATACCAATAAT
AATAATATCAACTTTCTTCTTAATCCTTCACAATCACGGTCTCCGCCTGT
GGATCCCAGTCTTCAGCATGCACCAGAGCGTAGGAGCTCATCATTGACCG
CCAGGCCACCAGTGCCGCGAGCCACGTCGGCCGATTCGAAGTCGGAGGCA
CCCGCAGAAACGGACCACGAGGTTGCGTATCTCCTAAGACATTTTTCAGA
GGCACCAGGACTTTGGATGGATCTGTTCGATTTAGGAACCTATTTCGCAT
CGTCCGTGCCGGTTAGAGCTCTCCGAAATCCATTGTTGAAATACGCCGCC
TGTGCGTATGCTGCGAAGCAACTGGGTCGTGTTAAGGGAACACAGGTGAC
AACCGGTGGTGTCTATTCTAGGCATCTCTCCAACAACGTAGATTGGTCCT
GGTCTGGCGCCAAGTATTATGAAAAGGCCATCCAACTCCTAATGAAAGAA
TTGCAACCTGATAAAGGACCTCCGCCGCTGAGTACCCCAGAGGCGTTTGG
GCAGTGGCAGGCTGCTGAGTTGTGCGAAGACCAAGAAAACCCTCGCAAAC
GCCGCCGCCGTTACTCGGACAGTCGGTTCTCGAAAGGGGTCCATTCAGAT
GAAATTCTTGCTGCCACAGCCATACTATCTGTATATGAGTTTTTAGATGC
CACAGGTCCGGCGTGGAATCGTCACCTGAGCGGCGTGAAGTCCTTGTTGG
ATGTAGCGGAGGTAGGAATGATGCCAGTCGAACAGCGCCATTCCCCCGGG
GGAACAGCGTTGCAACAAACCAAGGTTCCGGGGCTCTCGAAGGCGAGAAA
GGCGACCTTCTGGAACTTTGCACGACAAGACTACCTAGCTGCCTTCATCA
ATGAGAGCCAGACAAGGTTGAACACGGACGATCTGGTTTTGTGGACTGAG
GCGGGTCTCCAAATCGACAACATGGGCTTTGTACGCTCCAGTAATGCGAC
TGCAATAGGCTATCCAGACGGCGAAGAACCCATAAAGGAAGATCTGGTTT
CGAATGGTCTCGTTTGGATTCTCTCAAAGATCGTTAACTTTATCAATGCC
GGTGATAACGTCCAGTTGAACCACCCTGGCTCGATGGGGACGGGTCCTCT
GGGCCTTTCGCAGCAGGTTTTGCTGGAGCGATGGTACCGCCTGGAAGCTG
AGCTCGATGCCTGGTACAATGGACTTCCTGAGACGTTCCAGCCGTGTGCC
CGGGTTGACCTGTCCAAATTACCTCAGAATAAGGATAACCCGAAGTTTGA
CGCTGGCTCGCTGTCCGAAATATGGTATAGCTTACCCCTGTGCTCCTCGG
CGATGCAGCATTATCATATGGCTCGTATCCTCCTTCTCATAAATAAGCCA
CATGAGTCCACCAGCAGAAGGAGCACCATCGCTGATAGGCTTAATTCATA
TCGCTCGATCGAGAGTGATATTCGATTTCACAGCCGGGAAATTGTGGGGA
TTGCGTTGGCTTGTCCAACTGGCGCGGTCCGCATCAATTCCCTCCAGCCG
CTGTTTGTTAGTGGTCAGTGCCTGACGGAACCCGGAGAACGGCGGACAGT
CCTTGCTTTGCTTCATGGAATCGAAGCGGAACTCGGCTGGGCAACCGAGT
ATCGTGTAAACCAGTTGCTCAGAGAATGGGGCTGGAACGAGGATGCTGCG
AATGCGAGCGTCCCGTGAATGCGCGGCGTCATCGCACCTCAGATCTCTCC
CTCTCTCTCGATGTCCTCCAACAATACCAATAATAATAATATCAACTTTC
TTCTTAATCCTTCACAATCACGGTCTCCGCCTGTGGATCCCAGTCTTCAG
CATGCACCAGAGCGTAGGAGCTCATCATTGACCGCCAGGCCACCAGTGCC
GCGAGCCACGTCGGCCGATTCGAAGTCGGAGGCACCCGCAGAAACGGACC
ACGAGGTTGCGTATCTCCTAAGACATTTTTCAGAGGCACCAGGACTTTGG
ATGGATCTGTTCGATTTAGGAACCTATTTCGCATCGTCCGTGCCGGTTAG
AGCTCTCCGAAATCCATTGTTGAAATACGCCGCCTGTGCGTATGCTGCGA
AGCAACTGGGTCGTGTTAAGGGAACACAGGTGACAACCGGTGGTGTCTAT
TCTAGGCATCTCTCCAACAACGTAGATTGGTCCTGGTCTGGCGCCAAGTA
TTATGAAAAGGCCATCCAACTCCTAATGAAAGAATTGCAACCTGATAAAG
GACCTCCGCCGCTGAGTACCCCAGAGGCGTTTGGGCAGTGGCAGGCTGCT
GAGTTGTGCGAAGACCAAGAAAACCCTCGCAAACGCCGCCGCCGTTACTC
GGACAGTCGGTTCTCGAAAGGGGTCCATTCAGATGAAATTCTTGCTGCCA
CAGCCATACTATCTGTATATGAGTTTTTAGATGCCACAGGTCCGGCGTGG
AATCGTCACCTGAGCGGCGTGAAGTCCTTGTTGGATGTAGCGGAGGTAGG
AATGATGCCAGTCGAACAGCGCCATTCCCCCGGGGGAACAGCGTTGCAAC
AAACCAAGGTTCCGGGGCTCTCGAAGGCGAGAAAGGCGACCTTCTGGAAC
TTTGCACGACAAGACTACCTAGCTGCCTTCATCAATGAGAGCCAGACAAG
GTTGAACACGGACGATCTGGTTTTGTGGACTGAGGCGGGTCTCCAAATCG
ACAACATGGGCTTTGTACGCTCCAGTAATGCGACTGCAATAGGCTATCCA
GACGGCGAAGAACCCATAAAGGAAGATCTGGTTTCGAATGGTCTCGTTTG
GATTCTCTCAAAGATCGTTAACTTTATCAATGCCGGTGATAACGTCCAGT
TGAACCACCCTGGCTCGATGGGGACGGGTCCTCTGGGCCTTTCGCAGCAG
GTTTTGCTGGAGCGATGGTACCGCCTGGAAGCTGAGCTCGATGCCTGGTA
CAATGGACTTCCTGAGACGTTCCAGCCGTGTGCCCGGGTTGACCTGTCCA
AATTACCTCAGAATAAGGATAACCCGAAGTTTGACGCTGGCTCGCTGTCC
GAAATATGGTATAGCTTACCCCTGTGCTCCTCGGCGATGCAGCATTATCA
TATGGCTCGTATCCTCCTTCTCATAAATAAGCCACATGAGTCCACCAGCA
GAAGGAGCACCATCGCTGATAGGCTTAATTCATATCGCTCGATCGAGAGT
GATATTCGATTTCACAGCCGGGAAATTGTGGGGATTGCGTTGGCTTGTCC
AACTGGCGCGGTCCGCATCAATTCCCTCCAGCCGCTGTTTGTTAGTGGTC
AGTGCCTGACGGAACCCGGAGAACGGCGGACAGTCCTTGCTTTGCTTCAT
GGAATCGAAGCGGAACTCGGCTGGGCAACCGAGTATCGTGTAAACCAGTT
GCTCAGAGAATGGGGCTGGAACGAGGATGCTGCGAATGCGAGCGTCCCGT
GA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004761-T2.utr3p1 | KJC3_004761-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021858 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:632141..636012 + |
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