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KJC3_004762-T1, KJC3_004762-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004762-T1
Unique NameKJC3_004762-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:637484..639004-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004762-T1 ID=KJC3_004762-T1|Name=KJC3_004762-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1521bp|location=Sequence derived from alignment at ch4:637484..639004- (Aspergillus niger KJC3)
TTCGCCTTCCTCAGCGACAAGCTGATAGATTCTCAATTCACTCGCATAAT
GACTGTCGGCGCCTTTTCAGAATGGCGCAAGTTGCCCGTGAGCCTCAATG
AGCTCTGCATCAACACCACCCTCCGCTGTGGTCAATCTTTTCGGTAACAA
TAACCGCAAGTACCCTCCTCGTCTTCCCCGGACATGCAATCTAACCAAGC
TCCCTATCATCTACAGATGGCACAATGTCCCCGACACAGACGAATGGCGC
TGCGTTCTCCACGGCCGTCTCCTCTCTCTAAAACAAGACCCAACTCACCT
CTACTACCGAACCTACCGCACCACCCAATCCCCCAAACCCAAAATAAATG
ACGACGATACCACCCTCTCCCTCCTAACCCACTACTTCAACCTCTCCGCC
AACCTCACCTCCCTCTACACCGAATGGTCCGCCCAAGACCCCAATTTCCG
CAAGAAGGCCCCTCAATTCACCGGCATCCGCATCCTGCGCCAAGATGCCT
GGGAAGCCCTGATCTCCTTCATCTGCAGCAGCAACAACAACATCGCGCGC
ATCTCGCAGATGGTCGAGAAGCTCTGCCTAAACTACGGTCCCTTCATTGC
GTCCATCAATGGCCGCGCCTATCACGGTTTCCCGGCTCCGAATGCCCTCA
CCGCTCACGACGTGGAGGGTAAGCTGCGCGGGTTGGGGTTCGGGTACCGT
GCCAAATATATCTATCAGACGGCGGTGATGGTGGCCAAGGAGCGAGAGAG
CGGGTGGTTGGATTCGTTATGTAACCCAGAGTGTCCGGCTTGGGGGGTGG
AAGCTGCACCGGCGGGTGAAATGAAGCCCGAGGGGAGGGAAGGGTATCGG
GAGGCGCATGAGAAGTTGCTTGAGTTGCAGGGGGTTGGGCCGAAGGTCGC
TGATTGCGTGTGCTTGATGGGGCTGGGATGGGGGGAGGCAGTTCCGGTTG
ATACGCATGGTTTGTTACCTCGGTTGATCCCTTTGTCACGTCACATTTGA
TTGCTAATGGTCTTTGGTTTAGTCTGGCAAATCGCGCAGAGAGACTACAA
GTTTGGAAAGGGCGGTAATAAGTCCCTGACGAAGGTTACTTATGATGCCG
TGGGAAACCATTTCCGCAAGCTCTGGGGCAAAGAAGCGGGGTGGGCGCAT
AGTGTGCTGTTCACGGCTGATCTGAGGACCTTTTCGGATCGATTGGCTGC
TACTACGTCGAAGAAGGTGGATGTGAAGGTAGAGAAGGATGACAAGGAGG
GTGTCGAGGTGGAGACAAAGGTCACCACGGCGATTGCGGTGCCTACCAAG
AGACCTATAGATGAGGAGGGGGTGAAGGCTGAAGAAGAAGATGAAACTAA
AGAGAAGGAGAAGCTGAACACCATCGTACAAGCTTCACAGACAACGACGG
CAAGGAGGATGTCGAAGCGACTTCGCAAGAAATGATTTTTATACCCTGTA
TAATACCACCACTCTTACTTAATATCATCATAGACCATACTCCAATTCAA
ATCCATGCTACATGCTATACC
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Coding sequence (CDS) from alignment at ch4:637484..639004-

>KJC3_004762-T1 ID=KJC3_004762-T1|Name=KJC3_004762-T1|organism=Aspergillus niger KJC3|type=CDS|length=3753bp|location=Sequence derived from alignment at ch4:637484..639004- (Aspergillus niger KJC3)
TCTGGCAAATCGCGCAGAGAGACTACAAGTTTGGAAAGGGCGGTAATAAG
TCCCTGACGAAGGTTACTTATGATGCCGTGGGAAACCATTTCCGCAAGCT
CTGGGGCAAAGAAGCGGGGTGGGCGCATAGTGTGCTGTTCACGGCTGATC
TGAGGACCTTTTCGGATCGATTGGCTGCTACTACGTCGAAGAAGGTGGAT
GTGAAGGTAGAGAAGGATGACAAGGAGGGTGTCGAGGTGGAGACAAAGGT
CACCACGGCGATTGCGGTGCCTACCAAGAGACCTATAGATGAGGAGGGGG
TGAAGGCTGAAGAAGAAGATGAAACTAAAGAGAAGGAGAAGCTGAACACC
ATCGTACAAGCTTCACAGACAACGACGGCAAGGAGGATGTCGAAGCGACT
TCGCAAGAAATGAATGGCACAATGTCCCCGACACAGACGAATGGCGCTGC
GTTCTCCACGGCCGTCTCCTCTCTCTAAAACAAGACCCAACTCACCTCTA
CTACCGAACCTACCGCACCACCCAATCCCCCAAACCCAAAATAAATGACG
ACGATACCACCCTCTCCCTCCTAACCCACTACTTCAACCTCTCCGCCAAC
CTCACCTCCCTCTACACCGAATGGTCCGCCCAAGACCCCAATTTCCGCAA
GAAGGCCCCTCAATTCACCGGCATCCGCATCCTGCGCCAAGATGCCTGGG
AAGCCCTGATCTCCTTCATCTGCAGCAGCAACAACAACATCGCGCGCATC
TCGCAGATGGTCGAGAAGCTCTGCCTAAACTACGGTCCCTTCATTGCGTC
CATCAATGGCCGCGCCTATCACGGTTTCCCGGCTCCGAATGCCCTCACCG
CTCACGACGTGGAGGGTAAGCTGCGCGGGTTGGGGTTCGGGTACCGTGCC
AAATATATCTATCAGACGGCGGTGATGGTGGCCAAGGAGCGAGAGAGCGG
GTGGTTGGATTCGTTATGTAACCCAGAGTGTCCGGCTTGGGGGGTGGAAG
CTGCACCGGCGGGTGAAATGAAGCCCGAGGGGAGGGAAGGGTATCGGGAG
GCGCATGAGAAGTTGCTTGAGTTGCAGGGGGTTGGGCCGAAGGTCGCTGA
TTGCGTGTGCTTGATGGGGCTGGGATGGGGGGAGGCAGTTCCGGTTGATA
CGCATGATGACTGTCGGCGCCTTTTCAGAATGGCGCAAGTTGCCCGTGAG
CCTCAATGAGCTCTGCATCAACACCACCCTCCGCTGTGGTCAATCTTTTC
GTCTGGCAAATCGCGCAGAGAGACTACAAGTTTGGAAAGGGCGGTAATAA
GTCCCTGACGAAGGTTACTTATGATGCCGTGGGAAACCATTTCCGCAAGC
TCTGGGGCAAAGAAGCGGGGTGGGCGCATAGTGTGCTGTTCACGGCTGAT
CTGAGGACCTTTTCGGATCGATTGGCTGCTACTACGTCGAAGAAGGTGGA
TGTGAAGGTAGAGAAGGATGACAAGGAGGGTGTCGAGGTGGAGACAAAGG
TCACCACGGCGATTGCGGTGCCTACCAAGAGACCTATAGATGAGGAGGGG
GTGAAGGCTGAAGAAGAAGATGAAACTAAAGAGAAGGAGAAGCTGAACAC
CATCGTACAAGCTTCACAGACAACGACGGCAAGGAGGATGTCGAAGCGAC
TTCGCAAGAAATGAATGGCACAATGTCCCCGACACAGACGAATGGCGCTG
CGTTCTCCACGGCCGTCTCCTCTCTCTAAAACAAGACCCAACTCACCTCT
ACTACCGAACCTACCGCACCACCCAATCCCCCAAACCCAAAATAAATGAC
GACGATACCACCCTCTCCCTCCTAACCCACTACTTCAACCTCTCCGCCAA
CCTCACCTCCCTCTACACCGAATGGTCCGCCCAAGACCCCAATTTCCGCA
AGAAGGCCCCTCAATTCACCGGCATCCGCATCCTGCGCCAAGATGCCTGG
GAAGCCCTGATCTCCTTCATCTGCAGCAGCAACAACAACATCGCGCGCAT
CTCGCAGATGGTCGAGAAGCTCTGCCTAAACTACGGTCCCTTCATTGCGT
CCATCAATGGCCGCGCCTATCACGGTTTCCCGGCTCCGAATGCCCTCACC
GCTCACGACGTGGAGGGTAAGCTGCGCGGGTTGGGGTTCGGGTACCGTGC
CAAATATATCTATCAGACGGCGGTGATGGTGGCCAAGGAGCGAGAGAGCG
GGTGGTTGGATTCGTTATGTAACCCAGAGTGTCCGGCTTGGGGGGTGGAA
GCTGCACCGGCGGGTGAAATGAAGCCCGAGGGGAGGGAAGGGTATCGGGA
GGCGCATGAGAAGTTGCTTGAGTTGCAGGGGGTTGGGCCGAAGGTCGCTG
ATTGCGTGTGCTTGATGGGGCTGGGATGGGGGGAGGCAGTTCCGGTTGAT
ACGCATGATGACTGTCGGCGCCTTTTCAGAATGGCGCAAGTTGCCCGTGA
GCCTCAATGAGCTCTGCATCAACACCACCCTCCGCTGTGGTCAATCTTTT
CGTCTGGCAAATCGCGCAGAGAGACTACAAGTTTGGAAAGGGCGGTAATA
AGTCCCTGACGAAGGTTACTTATGATGCCGTGGGAAACCATTTCCGCAAG
CTCTGGGGCAAAGAAGCGGGGTGGGCGCATAGTGTGCTGTTCACGGCTGA
TCTGAGGACCTTTTCGGATCGATTGGCTGCTACTACGTCGAAGAAGGTGG
ATGTGAAGGTAGAGAAGGATGACAAGGAGGGTGTCGAGGTGGAGACAAAG
GTCACCACGGCGATTGCGGTGCCTACCAAGAGACCTATAGATGAGGAGGG
GGTGAAGGCTGAAGAAGAAGATGAAACTAAAGAGAAGGAGAAGCTGAACA
CCATCGTACAAGCTTCACAGACAACGACGGCAAGGAGGATGTCGAAGCGA
CTTCGCAAGAAATGAATGGCACAATGTCCCCGACACAGACGAATGGCGCT
GCGTTCTCCACGGCCGTCTCCTCTCTCTAAAACAAGACCCAACTCACCTC
TACTACCGAACCTACCGCACCACCCAATCCCCCAAACCCAAAATAAATGA
CGACGATACCACCCTCTCCCTCCTAACCCACTACTTCAACCTCTCCGCCA
ACCTCACCTCCCTCTACACCGAATGGTCCGCCCAAGACCCCAATTTCCGC
AAGAAGGCCCCTCAATTCACCGGCATCCGCATCCTGCGCCAAGATGCCTG
GGAAGCCCTGATCTCCTTCATCTGCAGCAGCAACAACAACATCGCGCGCA
TCTCGCAGATGGTCGAGAAGCTCTGCCTAAACTACGGTCCCTTCATTGCG
TCCATCAATGGCCGCGCCTATCACGGTTTCCCGGCTCCGAATGCCCTCAC
CGCTCACGACGTGGAGGGTAAGCTGCGCGGGTTGGGGTTCGGGTACCGTG
CCAAATATATCTATCAGACGGCGGTGATGGTGGCCAAGGAGCGAGAGAGC
GGGTGGTTGGATTCGTTATGTAACCCAGAGTGTCCGGCTTGGGGGGTGGA
AGCTGCACCGGCGGGTGAAATGAAGCCCGAGGGGAGGGAAGGGTATCGGG
AGGCGCATGAGAAGTTGCTTGAGTTGCAGGGGGTTGGGCCGAAGGTCGCT
GATTGCGTGTGCTTGATGGGGCTGGGATGGGGGGAGGCAGTTCCGGTTGA
TACGCATGATGACTGTCGGCGCCTTTTCAGAATGGCGCAAGTTGCCCGTG
AGCCTCAATGAGCTCTGCATCAACACCACCCTCCGCTGTGGTCAATCTTT
TCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003684damaged DNA binding
GO:0008534oxidized purine nucleobase lesion DNA N-glycosylase activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006289nucleotide-excision repair
GO:0006284base-excision repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004762KJC3_004762Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004762-T1KJC3_004762-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004762-T1.cdsKJC3_004762-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004762-T1.utr3p1KJC3_004762-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004762-T1.exon3KJC3_004762-T1.exon3Aspergillus niger KJC3exon
KJC3_004762-T1.exon2KJC3_004762-T1.exon2Aspergillus niger KJC3exon
KJC3_004762-T1.exon1KJC3_004762-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004762-T1.utr5p1KJC3_004762-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092628HC
DBxrefInterPro:IPR011257
DBxrefInterPro:IPR012904
DBxrefInterPro:IPR023170
DBxrefInterPro:IPR003265
DBxrefPFAM:PF07934
DBxrefPFAM:PF00730
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:637484..639004 -
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