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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:644831..647025- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004764-T1 ID=KJC3_004764-T1|Name=KJC3_004764-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2195bp|location=Sequence derived from alignment at ch4:644831..647025- (Aspergillus niger KJC3)
CTCCTGCTCCCCTCTCTTCCTACTAGTATCATGCGATAAATTGCAAGGCT
GTCTGTTCGATCGATATCAATCGTTCCACGGCCGTGAGCCTCTTGCGCGG
GGTAACCACGCCCGGGCACAGTCACTAGTATTATTGATAATCCCGCCACT
CGTTTGCCCCCGAGGACAGGACATGACCCTCTCCGGGCCTCTATCGCATC
CGTCGCGCATTCACGAAGATTTCTGAGAGCCGTCAAGGCTGGCACCATGG
CCAACGAAACATTGTCTGGATACTGTCCGACTCCTTTCCTCCAGGAGTCA
TTGTTCCCATCGAAAGGTGGATGTACGCTATCCCTTGCTAGTGTGGGCCC
AATTGCCGGTGACAAAACTGATCGTGTGCTTCGTCGCAGTCATTGATGGA
CGGTTTTGTGAGGAGCTTACTACAGAGCATGGCAAAGTTTCTTGCTGTCT
GCCCTGTCCATTGGCAGAATGGACCTATGGCGAAAGTATGTCTGCCACAC
GCATCCTCATTGTCCGAAAAGCCCTAGCTAACAAGGACGTTGTCGCAACT
AGAATTGATCTCCCAAACCAAGGTCGCTAGTTGGCTTGGTGTCGCGACAT
TGCCCCTGTGCATCTTCCTCCTGGTATCATTCGCCGTGCTGCCCCCGAAA
TGGACGCATCGTCATTATCTGAGCATTTGCTTCACCCTGGGAATCTGCTG
TATGGAGGTGGGTCGATTGCAATCGTGAATCAACTGGCCTGTATTCTGAC
TCAACCCCAGATCGCCTTCATCATCCCGCTAGGAGTCAAGCCAGAGCAAT
GCTACAACCAAATCACCCCCAATGACATGCATACCGATCTGTCGTGTGCC
TGGACCGGAGCCCTCCTCCTCTTCGGGGGCTGGGTATGCGTCACATTTAG
TATGCCTCTATACCATCCACCACCAGTACCAACAACCACTAACCAGCGAC
TGCAGGCTTCATCCGCACACTCGCCTTCCACCTCCAAGTCTGCTGGGAAA
TCATGCTTGGTCCGAAATTCATGTGGACAGCACTCATCCTAGGCTGGGGT
ATCCCGGCCGTCGGCCTGACCGAGATGCTAATCCTCACGGGGGTATCCTA
CCGCTTCGGCACCGTCTGCCACATCAACGTCCACGACAGCAACAAGGACT
ACTGGGCGCCTGTCGTCGCCTTCGGCGGAGCATCCCTCTTCCTCCAATTC
GCCACCCTCGTCTACTGCATCTACGTCTACGTCAAATCCCTCTACGACGA
GGAAACCTCCACCACCAGCTCCGGTCTCCCCTCCTACTCCGCCAGCGTCC
GCACCGTCACTGCCCGTCAAGCCTACCGCCGCATCCGCCGTGTCCTACAA
CTCCAATGGCGCGGCGTCGCCCTAGTCCTCGTCATTCTCACCAACGTCAT
CTTCTTCGCCGTCGTCTTCATCAAAATGGATAACCATCTTACCAGCACCG
TCGCTAATATGAAACTCGCCACCCCCTGGCTCACCTGTCTCGTCGAAACT
CAAGGCAACATCCAGAAATGCGCCAGTGAAGCTGAAGCCATCGTCCCGAA
CAAAGCTACCCTCCTCGCTGTCCTTATTCTTCTCGCGACGGTCGGCTTCT
GGAACTTCGTCCTCTACGCCCGTCCCTCTATCTTCGCCGGCTGGGCTGAG
TTCTTCAAGGCCCGCGTTACTCCGCCTCATGAGTTCGTCTCCGTTGATGC
GCGCAGGACGCCAGATCCTCGCGCCTACGAGATGATCTCGGGCTCCAGTC
TACCTCCGTATAAGACCCCTGAACCGGTTGTGCGGTCCCCGAGTCCCGCA
CGGACGATGGGCGCCCGTAGTCCGGAGGCGACGGGAGGACAGCACTATGG
TCGTGAGGCTCGCTATGTACGGCCTTCAATGAGTTTCTCGTCCCCGAGAC
CGCCTAGTGCGACGCAGGGTGGCCCGGAGCGCGAATGGGATCCAGAGTCT
ACGTTTGCTAAGAGCCATTCACAGAAGGGGTCCATATGATGCAGTGGGAT
TGGCGTTTTGTGAAAGGGTTCTTTTGTTAGCATGGGGCGCATGGAAGAGC
TGCTCTATCTTATTATTGTGTGATATGATGTGAAACTACTAACTGTTTAC
GGCTGGATTTGAGATTTTTATATACCCTGATGCATTTATGTTTGTATGTA
TACAATACCATAACTAGAAGAAAAGAAGAGATAAATCATTACACC back to topCoding sequence (CDS) from alignment at ch4:644831..647025- >KJC3_004764-T1 ID=KJC3_004764-T1|Name=KJC3_004764-T1|organism=Aspergillus niger KJC3|type=CDS|length=7500bp|location=Sequence derived from alignment at ch4:644831..647025- (Aspergillus niger KJC3)
GCTTCATCCGCACACTCGCCTTCCACCTCCAAGTCTGCTGGGAAATCATG
CTTGGTCCGAAATTCATGTGGACAGCACTCATCCTAGGCTGGGGTATCCC
GGCCGTCGGCCTGACCGAGATGCTAATCCTCACGGGGGTATCCTACCGCT
TCGGCACCGTCTGCCACATCAACGTCCACGACAGCAACAAGGACTACTGG
GCGCCTGTCGTCGCCTTCGGCGGAGCATCCCTCTTCCTCCAATTCGCCAC
CCTCGTCTACTGCATCTACGTCTACGTCAAATCCCTCTACGACGAGGAAA
CCTCCACCACCAGCTCCGGTCTCCCCTCCTACTCCGCCAGCGTCCGCACC
GTCACTGCCCGTCAAGCCTACCGCCGCATCCGCCGTGTCCTACAACTCCA
ATGGCGCGGCGTCGCCCTAGTCCTCGTCATTCTCACCAACGTCATCTTCT
TCGCCGTCGTCTTCATCAAAATGGATAACCATCTTACCAGCACCGTCGCT
AATATGAAACTCGCCACCCCCTGGCTCACCTGTCTCGTCGAAACTCAAGG
CAACATCCAGAAATGCGCCAGTGAAGCTGAAGCCATCGTCCCGAACAAAG
CTACCCTCCTCGCTGTCCTTATTCTTCTCGCGACGGTCGGCTTCTGGAAC
TTCGTCCTCTACGCCCGTCCCTCTATCTTCGCCGGCTGGGCTGAGTTCTT
CAAGGCCCGCGTTACTCCGCCTCATGAGTTCGTCTCCGTTGATGCGCGCA
GGACGCCAGATCCTCGCGCCTACGAGATGATCTCGGGCTCCAGTCTACCT
CCGTATAAGACCCCTGAACCGGTTGTGCGGTCCCCGAGTCCCGCACGGAC
GATGGGCGCCCGTAGTCCGGAGGCGACGGGAGGACAGCACTATGGTCGTG
AGGCTCGCTATGTACGGCCTTCAATGAGTTTCTCGTCCCCGAGACCGCCT
AGTGCGACGCAGGGTGGCCCGGAGCGCGAATGGGATCCAGAGTCTACGTT
TGCTAAGAGCCATTCACAGAAGGGGTCCATATGAATCGCCTTCATCATCC
CGCTAGGAGTCAAGCCAGAGCAATGCTACAACCAAATCACCCCCAATGAC
ATGCATACCGATCTGTCGTGTGCCTGGACCGGAGCCCTCCTCCTCTTCGG
GGGCTGGGTATGCGTCACATTTAAATTGATCTCCCAAACCAAGGTCGCTA
GTTGGCTTGGTGTCGCGACATTGCCCCTGTGCATCTTCCTCCTGGTATCA
TTCGCCGTGCTGCCCCCGAAATGGACGCATCGTCATTATCTGAGCATTTG
CTTCACCCTGGGAATCTGCTGTATGGAGTCATTGATGGACGGTTTTGTGA
GGAGCTTACTACAGAGCATGGCAAAGTTTCTTGCTGTCTGCCCTGTCCAT
TGGCAGAATGGACCTATGGCGAAAATGGCCAACGAAACATTGTCTGGATA
CTGTCCGACTCCTTTCCTCCAGGAGTCATTGTTCCCATCGAAAGGTGGAT
GCTTCATCCGCACACTCGCCTTCCACCTCCAAGTCTGCTGGGAAATCATG
CTTGGTCCGAAATTCATGTGGACAGCACTCATCCTAGGCTGGGGTATCCC
GGCCGTCGGCCTGACCGAGATGCTAATCCTCACGGGGGTATCCTACCGCT
TCGGCACCGTCTGCCACATCAACGTCCACGACAGCAACAAGGACTACTGG
GCGCCTGTCGTCGCCTTCGGCGGAGCATCCCTCTTCCTCCAATTCGCCAC
CCTCGTCTACTGCATCTACGTCTACGTCAAATCCCTCTACGACGAGGAAA
CCTCCACCACCAGCTCCGGTCTCCCCTCCTACTCCGCCAGCGTCCGCACC
GTCACTGCCCGTCAAGCCTACCGCCGCATCCGCCGTGTCCTACAACTCCA
ATGGCGCGGCGTCGCCCTAGTCCTCGTCATTCTCACCAACGTCATCTTCT
TCGCCGTCGTCTTCATCAAAATGGATAACCATCTTACCAGCACCGTCGCT
AATATGAAACTCGCCACCCCCTGGCTCACCTGTCTCGTCGAAACTCAAGG
CAACATCCAGAAATGCGCCAGTGAAGCTGAAGCCATCGTCCCGAACAAAG
CTACCCTCCTCGCTGTCCTTATTCTTCTCGCGACGGTCGGCTTCTGGAAC
TTCGTCCTCTACGCCCGTCCCTCTATCTTCGCCGGCTGGGCTGAGTTCTT
CAAGGCCCGCGTTACTCCGCCTCATGAGTTCGTCTCCGTTGATGCGCGCA
GGACGCCAGATCCTCGCGCCTACGAGATGATCTCGGGCTCCAGTCTACCT
CCGTATAAGACCCCTGAACCGGTTGTGCGGTCCCCGAGTCCCGCACGGAC
GATGGGCGCCCGTAGTCCGGAGGCGACGGGAGGACAGCACTATGGTCGTG
AGGCTCGCTATGTACGGCCTTCAATGAGTTTCTCGTCCCCGAGACCGCCT
AGTGCGACGCAGGGTGGCCCGGAGCGCGAATGGGATCCAGAGTCTACGTT
TGCTAAGAGCCATTCACAGAAGGGGTCCATATGAATCGCCTTCATCATCC
CGCTAGGAGTCAAGCCAGAGCAATGCTACAACCAAATCACCCCCAATGAC
ATGCATACCGATCTGTCGTGTGCCTGGACCGGAGCCCTCCTCCTCTTCGG
GGGCTGGGTATGCGTCACATTTAAATTGATCTCCCAAACCAAGGTCGCTA
GTTGGCTTGGTGTCGCGACATTGCCCCTGTGCATCTTCCTCCTGGTATCA
TTCGCCGTGCTGCCCCCGAAATGGACGCATCGTCATTATCTGAGCATTTG
CTTCACCCTGGGAATCTGCTGTATGGAGTCATTGATGGACGGTTTTGTGA
GGAGCTTACTACAGAGCATGGCAAAGTTTCTTGCTGTCTGCCCTGTCCAT
TGGCAGAATGGACCTATGGCGAAAATGGCCAACGAAACATTGTCTGGATA
CTGTCCGACTCCTTTCCTCCAGGAGTCATTGTTCCCATCGAAAGGTGGAT
GCTTCATCCGCACACTCGCCTTCCACCTCCAAGTCTGCTGGGAAATCATG
CTTGGTCCGAAATTCATGTGGACAGCACTCATCCTAGGCTGGGGTATCCC
GGCCGTCGGCCTGACCGAGATGCTAATCCTCACGGGGGTATCCTACCGCT
TCGGCACCGTCTGCCACATCAACGTCCACGACAGCAACAAGGACTACTGG
GCGCCTGTCGTCGCCTTCGGCGGAGCATCCCTCTTCCTCCAATTCGCCAC
CCTCGTCTACTGCATCTACGTCTACGTCAAATCCCTCTACGACGAGGAAA
CCTCCACCACCAGCTCCGGTCTCCCCTCCTACTCCGCCAGCGTCCGCACC
GTCACTGCCCGTCAAGCCTACCGCCGCATCCGCCGTGTCCTACAACTCCA
ATGGCGCGGCGTCGCCCTAGTCCTCGTCATTCTCACCAACGTCATCTTCT
TCGCCGTCGTCTTCATCAAAATGGATAACCATCTTACCAGCACCGTCGCT
AATATGAAACTCGCCACCCCCTGGCTCACCTGTCTCGTCGAAACTCAAGG
CAACATCCAGAAATGCGCCAGTGAAGCTGAAGCCATCGTCCCGAACAAAG
CTACCCTCCTCGCTGTCCTTATTCTTCTCGCGACGGTCGGCTTCTGGAAC
TTCGTCCTCTACGCCCGTCCCTCTATCTTCGCCGGCTGGGCTGAGTTCTT
CAAGGCCCGCGTTACTCCGCCTCATGAGTTCGTCTCCGTTGATGCGCGCA
GGACGCCAGATCCTCGCGCCTACGAGATGATCTCGGGCTCCAGTCTACCT
CCGTATAAGACCCCTGAACCGGTTGTGCGGTCCCCGAGTCCCGCACGGAC
GATGGGCGCCCGTAGTCCGGAGGCGACGGGAGGACAGCACTATGGTCGTG
AGGCTCGCTATGTACGGCCTTCAATGAGTTTCTCGTCCCCGAGACCGCCT
AGTGCGACGCAGGGTGGCCCGGAGCGCGAATGGGATCCAGAGTCTACGTT
TGCTAAGAGCCATTCACAGAAGGGGTCCATATGAATCGCCTTCATCATCC
CGCTAGGAGTCAAGCCAGAGCAATGCTACAACCAAATCACCCCCAATGAC
ATGCATACCGATCTGTCGTGTGCCTGGACCGGAGCCCTCCTCCTCTTCGG
GGGCTGGGTATGCGTCACATTTAAATTGATCTCCCAAACCAAGGTCGCTA
GTTGGCTTGGTGTCGCGACATTGCCCCTGTGCATCTTCCTCCTGGTATCA
TTCGCCGTGCTGCCCCCGAAATGGACGCATCGTCATTATCTGAGCATTTG
CTTCACCCTGGGAATCTGCTGTATGGAGTCATTGATGGACGGTTTTGTGA
GGAGCTTACTACAGAGCATGGCAAAGTTTCTTGCTGTCTGCCCTGTCCAT
TGGCAGAATGGACCTATGGCGAAAATGGCCAACGAAACATTGTCTGGATA
CTGTCCGACTCCTTTCCTCCAGGAGTCATTGTTCCCATCGAAAGGTGGAT
GCTTCATCCGCACACTCGCCTTCCACCTCCAAGTCTGCTGGGAAATCATG
CTTGGTCCGAAATTCATGTGGACAGCACTCATCCTAGGCTGGGGTATCCC
GGCCGTCGGCCTGACCGAGATGCTAATCCTCACGGGGGTATCCTACCGCT
TCGGCACCGTCTGCCACATCAACGTCCACGACAGCAACAAGGACTACTGG
GCGCCTGTCGTCGCCTTCGGCGGAGCATCCCTCTTCCTCCAATTCGCCAC
CCTCGTCTACTGCATCTACGTCTACGTCAAATCCCTCTACGACGAGGAAA
CCTCCACCACCAGCTCCGGTCTCCCCTCCTACTCCGCCAGCGTCCGCACC
GTCACTGCCCGTCAAGCCTACCGCCGCATCCGCCGTGTCCTACAACTCCA
ATGGCGCGGCGTCGCCCTAGTCCTCGTCATTCTCACCAACGTCATCTTCT
TCGCCGTCGTCTTCATCAAAATGGATAACCATCTTACCAGCACCGTCGCT
AATATGAAACTCGCCACCCCCTGGCTCACCTGTCTCGTCGAAACTCAAGG
CAACATCCAGAAATGCGCCAGTGAAGCTGAAGCCATCGTCCCGAACAAAG
CTACCCTCCTCGCTGTCCTTATTCTTCTCGCGACGGTCGGCTTCTGGAAC
TTCGTCCTCTACGCCCGTCCCTCTATCTTCGCCGGCTGGGCTGAGTTCTT
CAAGGCCCGCGTTACTCCGCCTCATGAGTTCGTCTCCGTTGATGCGCGCA
GGACGCCAGATCCTCGCGCCTACGAGATGATCTCGGGCTCCAGTCTACCT
CCGTATAAGACCCCTGAACCGGTTGTGCGGTCCCCGAGTCCCGCACGGAC
GATGGGCGCCCGTAGTCCGGAGGCGACGGGAGGACAGCACTATGGTCGTG
AGGCTCGCTATGTACGGCCTTCAATGAGTTTCTCGTCCCCGAGACCGCCT
AGTGCGACGCAGGGTGGCCCGGAGCGCGAATGGGATCCAGAGTCTACGTT
TGCTAAGAGCCATTCACAGAAGGGGTCCATATGAATCGCCTTCATCATCC
CGCTAGGAGTCAAGCCAGAGCAATGCTACAACCAAATCACCCCCAATGAC
ATGCATACCGATCTGTCGTGTGCCTGGACCGGAGCCCTCCTCCTCTTCGG
GGGCTGGGTATGCGTCACATTTAAATTGATCTCCCAAACCAAGGTCGCTA
GTTGGCTTGGTGTCGCGACATTGCCCCTGTGCATCTTCCTCCTGGTATCA
TTCGCCGTGCTGCCCCCGAAATGGACGCATCGTCATTATCTGAGCATTTG
CTTCACCCTGGGAATCTGCTGTATGGAGTCATTGATGGACGGTTTTGTGA
GGAGCTTACTACAGAGCATGGCAAAGTTTCTTGCTGTCTGCCCTGTCCAT
TGGCAGAATGGACCTATGGCGAAAATGGCCAACGAAACATTGTCTGGATA
CTGTCCGACTCCTTTCCTCCAGGAGTCATTGTTCCCATCGAAAGGTGGAT
GCTTCATCCGCACACTCGCCTTCCACCTCCAAGTCTGCTGGGAAATCATG
CTTGGTCCGAAATTCATGTGGACAGCACTCATCCTAGGCTGGGGTATCCC
GGCCGTCGGCCTGACCGAGATGCTAATCCTCACGGGGGTATCCTACCGCT
TCGGCACCGTCTGCCACATCAACGTCCACGACAGCAACAAGGACTACTGG
GCGCCTGTCGTCGCCTTCGGCGGAGCATCCCTCTTCCTCCAATTCGCCAC
CCTCGTCTACTGCATCTACGTCTACGTCAAATCCCTCTACGACGAGGAAA
CCTCCACCACCAGCTCCGGTCTCCCCTCCTACTCCGCCAGCGTCCGCACC
GTCACTGCCCGTCAAGCCTACCGCCGCATCCGCCGTGTCCTACAACTCCA
ATGGCGCGGCGTCGCCCTAGTCCTCGTCATTCTCACCAACGTCATCTTCT
TCGCCGTCGTCTTCATCAAAATGGATAACCATCTTACCAGCACCGTCGCT
AATATGAAACTCGCCACCCCCTGGCTCACCTGTCTCGTCGAAACTCAAGG
CAACATCCAGAAATGCGCCAGTGAAGCTGAAGCCATCGTCCCGAACAAAG
CTACCCTCCTCGCTGTCCTTATTCTTCTCGCGACGGTCGGCTTCTGGAAC
TTCGTCCTCTACGCCCGTCCCTCTATCTTCGCCGGCTGGGCTGAGTTCTT
CAAGGCCCGCGTTACTCCGCCTCATGAGTTCGTCTCCGTTGATGCGCGCA
GGACGCCAGATCCTCGCGCCTACGAGATGATCTCGGGCTCCAGTCTACCT
CCGTATAAGACCCCTGAACCGGTTGTGCGGTCCCCGAGTCCCGCACGGAC
GATGGGCGCCCGTAGTCCGGAGGCGACGGGAGGACAGCACTATGGTCGTG
AGGCTCGCTATGTACGGCCTTCAATGAGTTTCTCGTCCCCGAGACCGCCT
AGTGCGACGCAGGGTGGCCCGGAGCGCGAATGGGATCCAGAGTCTACGTT
TGCTAAGAGCCATTCACAGAAGGGGTCCATATGAATCGCCTTCATCATCC
CGCTAGGAGTCAAGCCAGAGCAATGCTACAACCAAATCACCCCCAATGAC
ATGCATACCGATCTGTCGTGTGCCTGGACCGGAGCCCTCCTCCTCTTCGG
GGGCTGGGTATGCGTCACATTTAAATTGATCTCCCAAACCAAGGTCGCTA
GTTGGCTTGGTGTCGCGACATTGCCCCTGTGCATCTTCCTCCTGGTATCA
TTCGCCGTGCTGCCCCCGAAATGGACGCATCGTCATTATCTGAGCATTTG
CTTCACCCTGGGAATCTGCTGTATGGAGTCATTGATGGACGGTTTTGTGA
GGAGCTTACTACAGAGCATGGCAAAGTTTCTTGCTGTCTGCCCTGTCCAT
TGGCAGAATGGACCTATGGCGAAAATGGCCAACGAAACATTGTCTGGATA
CTGTCCGACTCCTTTCCTCCAGGAGTCATTGTTCCCATCGAAAGGTGGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004888 | transmembrane signaling receptor activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007166 | cell surface receptor signaling pathway |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004764-T1.utr3p1 | KJC3_004764-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004764-T1.utr5p1 | KJC3_004764-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017981 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:644831..647025 - |
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