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KJC3_004772-T1, KJC3_004772-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004772-T1
Unique NameKJC3_004772-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:667285..668947-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004772-T1 ID=KJC3_004772-T1|Name=KJC3_004772-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1663bp|location=Sequence derived from alignment at ch4:667285..668947- (Aspergillus niger KJC3)
CCCGATACGATAGTCTTTAGTTTTCCCGCCGACAAGCCATACCCAGAAAG
CTTGCCTCAGCCTTTCTTCGCTTGTCTTTCAAATCCTCTCCAATGTTGAG
CAGAGTTTCCACCTCAGCATTACGCAAAGGCTTGTGTACTGCTCCGAGGT
GGAGTCTTCTACCTCGAAGCCGCCGCGGCCTGCTCACACTTGCCATCGAA
ACTTCCTGGTGCGTCTAATCCGCCCGGACTTACTTTCGCGACAGCATAGC
TAATCGTTCTAATCTATCTAGCGATGACACATCGGTAGCTATCGTCGAGA
AGGAATCCAATGCCGTCCAAATCCATTTCCTCGATAAGGTGACATGCGAC
ACCAGCGCATACCAGGGCATCCACCCGGTCGTGGCTCTCGAATCGCATCA
AGAGAATATCGCAAGTCTCGTCCATAAAGCACTCGCTCACCTGCCCGTCG
CGAAGCACGAAAAGCAACAAACGATCAATGTATCGAGTGATTCTGAATTG
CGCAGGAAACCCGACTTCGTATGCTCCACTAGGGGACCAGGGTTCCGCTC
GAACCTCTTTGTCGGGCTAGATACAGGAAAGGCGCTTTCCGTCGCATGGC
AGGTGCCGTTCGTTGGAGTCCATCATATGCAGGCTCATCTGTTGACTCCT
CGTCTTGTATCCTGTATGAACCGTGGCAAGGGCCAAGACAGCAGCCAGGA
TGTCGCGGCGTCGCAGCAGCAGCAGCAGCCCATCACTCCCGAGTTTCCCT
TCCTCTCTATCCTCATCTCCGGCGGCCATACAATGCTAGTCAAGTCCTCC
TCCATAACCGACCACGAAATCATGGCTTCGACGGTGGACCGAGCCCTCGG
AGAAGCTCTAGACAAGGCCGCCCGCGAAATCATTCCTCCTTTTCTCCTCC
AGACGTCAAAGAGCACCATGTACGGGAAATTGCTAGAAGAGTTCGCCTTC
CCGAACGGCAAAGCCGACTACGCCGACTACCAAGCTCCCAAATCTCGCCA
CGACGAACTTATCCCACGAGAAAACCCCTGGGGCTGGTCGTTCACAGAGC
CGTGGGCCCACAGCCGTCAACTGCAATACAGCTTCTGCTTCATAGGCAGT
ACGCTGGCGAGGATATTTTCCGCCCGCGAAGCAGCCGGTCAAACTATAAG
TCATGAGGAGAGGATAGCACTCGCTCGGGAGGCAATGCGGACTAGCTTTG
AGCATCTCGCGTCGCGCACTATCATGGCGCTGGAAAGCCTTGCGAAACAA
GGGCCTGAGAAGGAGGTTAAGACCCTCGTTGTTAGTGGTGGCGTTGCGGC
GAACCAGTACCTTATGACTGTGTTGCGCTCGTGGCTGGATGCCCGCGGGT
TCGGGCACGTTGGGCTTGTTGCTCCTCCGCCATACTTGTGTACGGATAAT
GCTGCTATGATTGCTTGGGCGGGTATGGAGATGTTCGAGGCGGGCTGGCG
CACGAATCTTACCTCTCGGGCTATTAGAAAGTGGTCGCTTGATCCGCGGG
AGGGGGATGGTGGTGTGCTGGGGCCTTTCGGGTGGGAGAGAGCTGAGGAT
CATTTTGTACAATAGACCGTAGGATGTTGTTTAGCGGCACTTCACTCTTT
CGAGTGTGTATTTTTATGAGCTGTATATAGATCACAACCAATGTATCACC
ACTACTACTGGGC
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Coding sequence (CDS) from alignment at ch4:667285..668947-

>KJC3_004772-T1 ID=KJC3_004772-T1|Name=KJC3_004772-T1|organism=Aspergillus niger KJC3|type=CDS|length=2820bp|location=Sequence derived from alignment at ch4:667285..668947- (Aspergillus niger KJC3)
CGATGACACATCGGTAGCTATCGTCGAGAAGGAATCCAATGCCGTCCAAA
TCCATTTCCTCGATAAGGTGACATGCGACACCAGCGCATACCAGGGCATC
CACCCGGTCGTGGCTCTCGAATCGCATCAAGAGAATATCGCAAGTCTCGT
CCATAAAGCACTCGCTCACCTGCCCGTCGCGAAGCACGAAAAGCAACAAA
CGATCAATGTATCGAGTGATTCTGAATTGCGCAGGAAACCCGACTTCGTA
TGCTCCACTAGGGGACCAGGGTTCCGCTCGAACCTCTTTGTCGGGCTAGA
TACAGGAAAGGCGCTTTCCGTCGCATGGCAGGTGCCGTTCGTTGGAGTCC
ATCATATGCAGGCTCATCTGTTGACTCCTCGTCTTGTATCCTGTATGAAC
CGTGGCAAGGGCCAAGACAGCAGCCAGGATGTCGCGGCGTCGCAGCAGCA
GCAGCAGCCCATCACTCCCGAGTTTCCCTTCCTCTCTATCCTCATCTCCG
GCGGCCATACAATGCTAGTCAAGTCCTCCTCCATAACCGACCACGAAATC
ATGGCTTCGACGGTGGACCGAGCCCTCGGAGAAGCTCTAGACAAGGCCGC
CCGCGAAATCATTCCTCCTTTTCTCCTCCAGACGTCAAAGAGCACCATGT
ACGGGAAATTGCTAGAAGAGTTCGCCTTCCCGAACGGCAAAGCCGACTAC
GCCGACTACCAAGCTCCCAAATCTCGCCACGACGAACTTATCCCACGAGA
AAACCCCTGGGGCTGGTCGTTCACAGAGCCGTGGGCCCACAGCCGTCAAC
TGCAATACAGCTTCTGCTTCATAGGCAGTACGCTGGCGAGGATATTTTCC
GCCCGCGAAGCAGCCGGTCAAACTATAAGTCATGAGGAGAGGATAGCACT
CGCTCGGGAGGCAATGCGGACTAGCTTTGAGCATCTCGCGTCGCGCACTA
TCATGGCGCTGGAAAGCCTTGCGAAACAAGGGCCTGAGAAGGAGGTTAAG
ACCCTCGTTGTTAGTGGTGGCGTTGCGGCGAACCAGTACCTTATGACTGT
GTTGCGCTCGTGGCTGGATGCCCGCGGGTTCGGGCACGTTGGGCTTGTTG
CTCCTCCGCCATACTTGTGTACGGATAATGCTGCTATGATTGCTTGGGCG
GGTATGGAGATGTTCGAGGCGGGCTGGCGCACGAATCTTACCTCTCGGGC
TATTAGAAAGTGGTCGCTTGATCCGCGGGAGGGGGATGGTGGTGTGCTGG
GGCCTTTCGGGTGGGAGAGAGCTGAGGATCATTTTGTACAATAGATGTTG
AGCAGAGTTTCCACCTCAGCATTACGCAAAGGCTTGTGTACTGCTCCGAG
GTGGAGTCTTCTACCTCGAAGCCGCCGCGGCCTGCTCACACTTGCCATCG
AAACTTCCTGCGATGACACATCGGTAGCTATCGTCGAGAAGGAATCCAAT
GCCGTCCAAATCCATTTCCTCGATAAGGTGACATGCGACACCAGCGCATA
CCAGGGCATCCACCCGGTCGTGGCTCTCGAATCGCATCAAGAGAATATCG
CAAGTCTCGTCCATAAAGCACTCGCTCACCTGCCCGTCGCGAAGCACGAA
AAGCAACAAACGATCAATGTATCGAGTGATTCTGAATTGCGCAGGAAACC
CGACTTCGTATGCTCCACTAGGGGACCAGGGTTCCGCTCGAACCTCTTTG
TCGGGCTAGATACAGGAAAGGCGCTTTCCGTCGCATGGCAGGTGCCGTTC
GTTGGAGTCCATCATATGCAGGCTCATCTGTTGACTCCTCGTCTTGTATC
CTGTATGAACCGTGGCAAGGGCCAAGACAGCAGCCAGGATGTCGCGGCGT
CGCAGCAGCAGCAGCAGCCCATCACTCCCGAGTTTCCCTTCCTCTCTATC
CTCATCTCCGGCGGCCATACAATGCTAGTCAAGTCCTCCTCCATAACCGA
CCACGAAATCATGGCTTCGACGGTGGACCGAGCCCTCGGAGAAGCTCTAG
ACAAGGCCGCCCGCGAAATCATTCCTCCTTTTCTCCTCCAGACGTCAAAG
AGCACCATGTACGGGAAATTGCTAGAAGAGTTCGCCTTCCCGAACGGCAA
AGCCGACTACGCCGACTACCAAGCTCCCAAATCTCGCCACGACGAACTTA
TCCCACGAGAAAACCCCTGGGGCTGGTCGTTCACAGAGCCGTGGGCCCAC
AGCCGTCAACTGCAATACAGCTTCTGCTTCATAGGCAGTACGCTGGCGAG
GATATTTTCCGCCCGCGAAGCAGCCGGTCAAACTATAAGTCATGAGGAGA
GGATAGCACTCGCTCGGGAGGCAATGCGGACTAGCTTTGAGCATCTCGCG
TCGCGCACTATCATGGCGCTGGAAAGCCTTGCGAAACAAGGGCCTGAGAA
GGAGGTTAAGACCCTCGTTGTTAGTGGTGGCGTTGCGGCGAACCAGTACC
TTATGACTGTGTTGCGCTCGTGGCTGGATGCCCGCGGGTTCGGGCACGTT
GGGCTTGTTGCTCCTCCGCCATACTTGTGTACGGATAATGCTGCTATGAT
TGCTTGGGCGGGTATGGAGATGTTCGAGGCGGGCTGGCGCACGAATCTTA
CCTCTCGGGCTATTAGAAAGTGGTCGCTTGATCCGCGGGAGGGGGATGGT
GGTGTGCTGGGGCCTTTCGGGTGGGAGAGAGCTGAGGATCATTTTGTACA
ATAGATGTTGAGCAGAGTTTCCACCTCAGCATTACGCAAAGGCTTGTGTA
CTGCTCCGAGGTGGAGTCTTCTACCTCGAAGCCGCCGCGGCCTGCTCACA
CTTGCCATCGAAACTTCCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0002949tRNA threonylcarbamoyladenosine modification
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004772KJC3_004772Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004772-T1KJC3_004772-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004772-T1.cdsKJC3_004772-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004772-T1.utr3p1KJC3_004772-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004772-T1.exon2KJC3_004772-T1.exon2Aspergillus niger KJC3exon
KJC3_004772-T1.exon1KJC3_004772-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004772-T1.utr5p1KJC3_004772-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR043129
DBxrefInterPro:IPR022450
DBxrefInterPro:IPR017860
DBxrefInterPro:IPR000905
DBxrefInterPro:IPR017861
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:667285..668947 -
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