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KJC3_004775-T1, KJC3_004775-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004775-T1
Unique NameKJC3_004775-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:676906..679189+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004775-T1 ID=KJC3_004775-T1|Name=KJC3_004775-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2284bp|location=Sequence derived from alignment at ch4:676906..679189+ (Aspergillus niger KJC3)
CTTACGCTAAGATGGCTTCGATCGACAAACAAAAATAGGATGAGCTAACT
CTCACTGTACCCCACAAATCGCATCAACTGCAAGTCCCCTTATTTATCTT
TTCGAAAAATGGTAAAACGCTGAGAAAGGAATAAAACATTGATGAGGAAA
AGAGTCGTTCATGTAGTGAAGATCGGCGAAGCTTTTGGTCGAAGGAATTA
GTGCGTGGTAGGAACCAATAAAGCGGGACCGTAAACACTTGGCTCTCTGG
GCGTCACTGCCCGTACTACTAGGATCACCATCTCACTCAGTGTACTCCGT
ACCTGTAGCTAATTTGGATACGAACTTCTGCAACGTTTGAACTCCAGCCT
TACCCGCCATGGTGGCTGAAATGTAGCAGAACAGTGGCAGCCCGATTCGG
CCACCGGTTCCATCGGATACGATGGATCCTGATGAACGGCCGCTAAGTTC
GGGCCCAGACCAGAGTGGCTCTCAAAGGAGGTAATACCGCGTGTGACCTA
CTTCGGTGTGGTCCATAGGCAGTTTCTCCATGACTTCTTAGAAATCGTTA
GAGCGTTCATGGTTGCTGGACAAAGGTGATGGGTCTGCCTAACCTAGCAG
ACTAGTCAAACTCGCCTGCCTGCCGCCCTGTTTTTTTTCCTTTTGCCAGG
GCTCTTCCACATCGGCCATGCAAACACGCCAAACCCCACCAGGCGCCAGG
TATCCACGGAAGTATGGCAACCACGGAGGATGACGACAACTTGTGAACTC
AGTCCTTCGCTGTCACCTTGGCTCCCTTCTCCTTTTCCTCCGACTGGCTT
CCGGGATCTTTTTGCAAGACTTCAGACAAGGTAGATCCTCTGGCGTTGGG
CTCGAGGAAACAACATCAATTCCATTTGCTGGGCCCATCGATAAGTCCCA
GCGTATGCGAAGCTTCCGCCTGCAGTGCAGGGTAACCTCGACGACCGGTG
TACATGACCTAATCCTGGTTTCCATACATTGAGCATCGCAAATGGGCGCA
GTGAAGAACATTCTAGAGCCTGCGGGTAAGTTATATCCCTGCTACTTGCA
ATCCCGCATCATCCGAAGAAGCATACTGATATTCCCGTCCTCTTGTAGCG
ATTGTTGCCGCCTTCACCGCAGGATCACTCATCAATCGGCGCAAGAACGC
TAAGCTCCTCGCTACGCCGGACGTCGAGTCACCACTGCTGGAAGCCCCTC
CAGTAGACATAAAGCCAAACGAGGAGGACGCTGATGAGCGCACAATCCGA
AACCGCCGAACCATACAATCACGGATCCTAGCCAAGTTCCCCTTCTTGTT
GGAAATATGGTACTGGCTACTCACATATTGGGTGAGACACATCTCGATGC
CCAAGGCACACTTCCTATAGTACCACGCATAACTGACTAGGTGGGCAGAT
CTATCAAGGTTTACGGGCGTTTTCCGCTAGAATGATTAGTGGCCATGAGG
CTATCTTCGACACTGCCGAGCGTCATGCCCTTTCCATCCTCTCATTCGAG
CACTTCCTTCACCTCGATGTCGAGCTGTCAGTACAAAGGTATGTGCTTGA
GCAGAAGCCATGGCTCATGGGATTCCTGGCTCGGGTATACTATTCACACA
TTGTCCTCGGCGTGATATTCATCGTCTACTGCTATACCTTCCTCCAACGA
GACAAATATCAAGCAATCAGGCGTACGCTGGCGTTCGAGAATGTCATTGC
CTTCACCATCCTTACCTTGTGGAGGTGCATGCCACCTCGCCTGCTGCCAG
AAGAGTACGGCTTCATCGACGTTCTGCACAGCAATACAGGCGGCTCAGCT
TGGACGCAGAACAAATTCCAACTTACAATTGCAGCGATGCCCTCACTTCA
TTTTGGAAACTCGATGTTCATTGCATTCTGCCTGCTGAAGTTCAGTCCGC
ATTGGTACCTTCGGGCTGTGGCGCCCATCTGGCCCATGCTCATGGCACTC
ACTATCGTTGCGACGGCCAATCATTTCATCCTAGATGCTGTCGTCGGTGC
ATGTGTGACGCTGACGGCATTTAGATATAACACCGTCATGTTGTATCTTC
TTCCTGTGGAAAGAGTACTCTTCAGGTTGTTGCGTATAGAGAAACCCTAG
GCCGCCAGAGGTGCCTAGCTTACCGGTATAAAGTCTTGGGAACTTGGGGT
CACGATATCCATATCGTCATTCGTACTGGATCAATATTCTTTGGTGAAGA
GTACATAGTCATTGTTAATCAACATACATTTGGATCGCGTCTGTACAGGC
ACAGTGTCTTTCCCATCAACCGTATCGTACGGGC
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Coding sequence (CDS) from alignment at ch4:676906..679189+

>KJC3_004775-T1 ID=KJC3_004775-T1|Name=KJC3_004775-T1|organism=Aspergillus niger KJC3|type=CDS|length=2907bp|location=Sequence derived from alignment at ch4:676906..679189+ (Aspergillus niger KJC3)
ATGGGCGCAGTGAAGAACATTCTAGAGCCTGCGGCGATTGTTGCCGCCTT
CACCGCAGGATCACTCATCAATCGGCGCAAGAACGCTAAGCTCCTCGCTA
CGCCGGACGTCGAGTCACCACTGCTGGAAGCCCCTCCAGTAGACATAAAG
CCAAACGAGGAGGACGCTGATGAGCGCACAATCCGAAACCGCCGAACCAT
ACAATCACGGATCCTAGCCAAGTTCCCCTTCTTGTTGGAAATATGGTACT
GGCTACTCACATATTGGATCTATCAAGGTTTACGGGCGTTTTCCGCTAGA
ATGATTAGTGGCCATGAGGCTATCTTCGACACTGCCGAGCGTCATGCCCT
TTCCATCCTCTCATTCGAGCACTTCCTTCACCTCGATGTCGAGCTGTCAG
TACAAAGGTATGTGCTTGAGCAGAAGCCATGGCTCATGGGATTCCTGGCT
CGGGTATACTATTCACACATTGTCCTCGGCGTGATATTCATCGTCTACTG
CTATACCTTCCTCCAACGAGACAAATATCAAGCAATCAGGCGTACGCTGG
CGTTCGAGAATGTCATTGCCTTCACCATCCTTACCTTGTGGAGGTGCATG
CCACCTCGCCTGCTGCCAGAAGAGTACGGCTTCATCGACGTTCTGCACAG
CAATACAGGCGGCTCAGCTTGGACGCAGAACAAATTCCAACTTACAATTG
CAGCGATGCCCTCACTTCATTTTGGAAACTCGATGTTCATTGCATTCTGC
CTGCTGAAGTTCAGTCCGCATTGGTACCTTCGGGCTGTGGCGCCCATCTG
GCCCATGCTCATGGCACTCACTATCGTTGCGACGGCCAATCATTTCATCC
TAGATGCTGTCGTCGGTGCATGTGTGACGCTGACGGCATTTAGATATAAC
ACCGTCATGTTGTATCTTCTTCCTGTGGAAAGAGTACTCTTCAGGTTGTT
GCGTATAGAGAAACCCTAGATGGGCGCAGTGAAGAACATTCTAGAGCCTG
CGGCGATTGTTGCCGCCTTCACCGCAGGATCACTCATCAATCGGCGCAAG
AACGCTAAGCTCCTCGCTACGCCGGACGTCGAGTCACCACTGCTGGAAGC
CCCTCCAGTAGACATAAAGCCAAACGAGGAGGACGCTGATGAGCGCACAA
TCCGAAACCGCCGAACCATACAATCACGGATCCTAGCCAAGTTCCCCTTC
TTGTTGGAAATATGGTACTGGCTACTCACATATTGGATCTATCAAGGTTT
ACGGGCGTTTTCCGCTAGAATGATTAGTGGCCATGAGGCTATCTTCGACA
CTGCCGAGCGTCATGCCCTTTCCATCCTCTCATTCGAGCACTTCCTTCAC
CTCGATGTCGAGCTGTCAGTACAAAGGTATGTGCTTGAGCAGAAGCCATG
GCTCATGGGATTCCTGGCTCGGGTATACTATTCACACATTGTCCTCGGCG
TGATATTCATCGTCTACTGCTATACCTTCCTCCAACGAGACAAATATCAA
GCAATCAGGCGTACGCTGGCGTTCGAGAATGTCATTGCCTTCACCATCCT
TACCTTGTGGAGGTGCATGCCACCTCGCCTGCTGCCAGAAGAGTACGGCT
TCATCGACGTTCTGCACAGCAATACAGGCGGCTCAGCTTGGACGCAGAAC
AAATTCCAACTTACAATTGCAGCGATGCCCTCACTTCATTTTGGAAACTC
GATGTTCATTGCATTCTGCCTGCTGAAGTTCAGTCCGCATTGGTACCTTC
GGGCTGTGGCGCCCATCTGGCCCATGCTCATGGCACTCACTATCGTTGCG
ACGGCCAATCATTTCATCCTAGATGCTGTCGTCGGTGCATGTGTGACGCT
GACGGCATTTAGATATAACACCGTCATGTTGTATCTTCTTCCTGTGGAAA
GAGTACTCTTCAGGTTGTTGCGTATAGAGAAACCCTAGATGGGCGCAGTG
AAGAACATTCTAGAGCCTGCGGCGATTGTTGCCGCCTTCACCGCAGGATC
ACTCATCAATCGGCGCAAGAACGCTAAGCTCCTCGCTACGCCGGACGTCG
AGTCACCACTGCTGGAAGCCCCTCCAGTAGACATAAAGCCAAACGAGGAG
GACGCTGATGAGCGCACAATCCGAAACCGCCGAACCATACAATCACGGAT
CCTAGCCAAGTTCCCCTTCTTGTTGGAAATATGGTACTGGCTACTCACAT
ATTGGATCTATCAAGGTTTACGGGCGTTTTCCGCTAGAATGATTAGTGGC
CATGAGGCTATCTTCGACACTGCCGAGCGTCATGCCCTTTCCATCCTCTC
ATTCGAGCACTTCCTTCACCTCGATGTCGAGCTGTCAGTACAAAGGTATG
TGCTTGAGCAGAAGCCATGGCTCATGGGATTCCTGGCTCGGGTATACTAT
TCACACATTGTCCTCGGCGTGATATTCATCGTCTACTGCTATACCTTCCT
CCAACGAGACAAATATCAAGCAATCAGGCGTACGCTGGCGTTCGAGAATG
TCATTGCCTTCACCATCCTTACCTTGTGGAGGTGCATGCCACCTCGCCTG
CTGCCAGAAGAGTACGGCTTCATCGACGTTCTGCACAGCAATACAGGCGG
CTCAGCTTGGACGCAGAACAAATTCCAACTTACAATTGCAGCGATGCCCT
CACTTCATTTTGGAAACTCGATGTTCATTGCATTCTGCCTGCTGAAGTTC
AGTCCGCATTGGTACCTTCGGGCTGTGGCGCCCATCTGGCCCATGCTCAT
GGCACTCACTATCGTTGCGACGGCCAATCATTTCATCCTAGATGCTGTCG
TCGGTGCATGTGTGACGCTGACGGCATTTAGATATAACACCGTCATGTTG
TATCTTCTTCCTGTGGAAAGAGTACTCTTCAGGTTGTTGCGTATAGAGAA
ACCCTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004775KJC3_004775Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004775-T1KJC3_004775-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004775-T1.utr5p1KJC3_004775-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004775-T1.exon1KJC3_004775-T1.exon1Aspergillus niger KJC3exon
KJC3_004775-T1.exon2KJC3_004775-T1.exon2Aspergillus niger KJC3exon
KJC3_004775-T1.exon3KJC3_004775-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004775-T1.cdsKJC3_004775-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004775-T1.utr3p1KJC3_004775-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR026841
DBxrefPFAM:PF14378
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:676906..679189 +
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