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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:685142..685943- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004778-T1 ID=KJC3_004778-T1|Name=KJC3_004778-T1|organism=Aspergillus niger KJC3|type=mRNA|length=802bp|location=Sequence derived from alignment at ch4:685142..685943- (Aspergillus niger KJC3)
AGACCCCAGTGAGGCAGCTTTGAGAGCATCTCGACGTCGCAATTCGACAC
AGTCCCCAGGACGGACCTCTTCATCATGAATTCAGCAAGACTTTCCCTCC
GGCATCTGGCCCAAGCGGTCCCAGCCCTCCGACCTGCCGGCGCTTTCCAC
ATCCCAACAACTCAATTACATTATCGGCTACAGTCCACTTCTTCCAGATC
GATACCCAGATTCGCTCAAACGTCAATATGGACATCCATGATCCCCAAGT
TTATCCGGAACCGCGGCGCTAAAGAAACCAAGCCGTATAAGCCGAAATCC
AAGGAATGGAACCCCGCAAGTTTCTACATCATCATCTTCATCCTGATCGG
ATCTCAGGCCATCCGGATGATCGCATTGAAGAATGACTATGCGGCGTATA
CGCGATCGACAGATGCGAAGATCAGGCTCCTCCGGGAGGTGATAGAAAGG
GTGAACAATGGAGAGAAGGTCGATGTGGAGAAATTGTTGGGCACGGGGGA
TGAGGCGAAGGAAAGAGAATGGGAGGAAGGTTGGTGCTTTTTTACCGTTC
TACCATACTTGGAAATCTGCTTTTACTGACATGGGGCTCTTCTTTGATAT
AGTACTCCGTGAGATCGAAGCGGAAGATTCATTATGGCATCGCAAGGCGG
CCGCATCGGAAGCTCAGCAAGAGCAGGTTGAGGAACCAAAACAATCGATA
ATGAAGTCAATTATCAAAGAGCCTGCTGTACCTGCTGAGGGACCTCGGGA
TCAAGGTCTACCTGCCGATAGCCCGTCTAAGAAGAAGCTCAATTTCTTCT
AA back to topCoding sequence (CDS) from alignment at ch4:685142..685943- >KJC3_004778-T1 ID=KJC3_004778-T1|Name=KJC3_004778-T1|organism=Aspergillus niger KJC3|type=CDS|length=1308bp|location=Sequence derived from alignment at ch4:685142..685943- (Aspergillus niger KJC3)
TACTCCGTGAGATCGAAGCGGAAGATTCATTATGGCATCGCAAGGCGGCC
GCATCGGAAGCTCAGCAAGAGCAGGTTGAGGAACCAAAACAATCGATAAT
GAAGTCAATTATCAAAGAGCCTGCTGTACCTGCTGAGGGACCTCGGGATC
AAGGTCTACCTGCCGATAGCCCGTCTAAGAAGAAGCTCAATTTCTTCTAA
ATGAATTCAGCAAGACTTTCCCTCCGGCATCTGGCCCAAGCGGTCCCAGC
CCTCCGACCTGCCGGCGCTTTCCACATCCCAACAACTCAATTACATTATC
GGCTACAGTCCACTTCTTCCAGATCGATACCCAGATTCGCTCAAACGTCA
ATATGGACATCCATGATCCCCAAGTTTATCCGGAACCGCGGCGCTAAAGA
AACCAAGCCGTATAAGCCGAAATCCAAGGAATGGAACCCCGCAAGTTTCT
ACATCATCATCTTCATCCTGATCGGATCTCAGGCCATCCGGATGATCGCA
TTGAAGAATGACTATGCGGCGTATACGCGATCGACAGATGCGAAGATCAG
GCTCCTCCGGGAGGTGATAGAAAGGGTGAACAATGGAGAGAAGGTCGATG
TGGAGAAATTGTTGGGCACGGGGGATGAGGCGAAGGAAAGAGAATGGGAG
GAAGTACTCCGTGAGATCGAAGCGGAAGATTCATTATGGCATCGCAAGGC
GGCCGCATCGGAAGCTCAGCAAGAGCAGGTTGAGGAACCAAAACAATCGA
TAATGAAGTCAATTATCAAAGAGCCTGCTGTACCTGCTGAGGGACCTCGG
GATCAAGGTCTACCTGCCGATAGCCCGTCTAAGAAGAAGCTCAATTTCTT
CTAAATGAATTCAGCAAGACTTTCCCTCCGGCATCTGGCCCAAGCGGTCC
CAGCCCTCCGACCTGCCGGCGCTTTCCACATCCCAACAACTCAATTACAT
TATCGGCTACAGTCCACTTCTTCCAGATCGATACCCAGATTCGCTCAAAC
GTCAATATGGACATCCATGATCCCCAAGTTTATCCGGAACCGCGGCGCTA
AAGAAACCAAGCCGTATAAGCCGAAATCCAAGGAATGGAACCCCGCAAGT
TTCTACATCATCATCTTCATCCTGATCGGATCTCAGGCCATCCGGATGAT
CGCATTGAAGAATGACTATGCGGCGTATACGCGATCGACAGATGCGAAGA
TCAGGCTCCTCCGGGAGGTGATAGAAAGGGTGAACAATGGAGAGAAGGTC
GATGTGGAGAAATTGTTGGGCACGGGGGATGAGGCGAAGGAAAGAGAATG
GGAGGAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004778-T1.utr5p1 | KJC3_004778-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035213 |
| DBxref | PFAM:PF17254 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:685142..685943 - |
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