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KJC3_004781-T1, KJC3_004781-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004781-T1
Unique NameKJC3_004781-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:694204..696203-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004781-T1 ID=KJC3_004781-T1|Name=KJC3_004781-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2000bp|location=Sequence derived from alignment at ch4:694204..696203- (Aspergillus niger KJC3)
CCCCTCGATATCACATCCCCTCTCACGCTATCTTCTCTGGCGCAGCTTCC
ATGTAATTTCATTGCTCATCACACTTGGCGTCTGTCAGGTCGGCCAAGAC
CAACCCATGGCTTATACTAACCGCTGCACTTTTCCAGCACGACACGCTGG
AATCTCAGCACAGCTGATCCGTTGGGATCAGGGTAACTACGCAGGACTTA
TTGGCTAACAATGTCTCGTGGGGTGATATGAAGTCGCAACATTCGTGGTG
TCTCCCGAAAACCATGGCATCGAAAGCTGCTTCATTGATAGGTCCCATTT
AACCTGCTGCCTCCCACCATGCAATATAAATATTCTGAAGTCGACACGAT
CCAGAACCTGCTCCTCTGCCACATCATATTTAAGCTTAAAAAAACAATCT
CCATCTTGGTGCACATATTTTGGTATATACATCGTGCTCATAAGTCGTCA
TAATGATAGACCTCCTGGAAGTGAAAAGACGCTACGAAGCCGTGCTGGCA
GTTGAAGATAGCAGAGACAAAATCCTCCAGGTACTCTTCTACACAGCATA
AAGCATAATCAGCTTATTGACTTTTTGTTTGACAGAATCTATTTGCCCAA
GTTGAAAGCCTGCAGAAGGCTCTCCAAAATACACTTGGTGATGCCAAATT
CCAAGAACTGAAAAAATACAAGACAGAGTACGACGATTTGCGACTTGACC
AGGTACTTCTTCCCTATTTAGTGTCTAGCTTCCATAGGCTTATACAGCTC
CGCAGGCCAAGTTGAGTTTTGTTTCTGTGCTTGTCGATGGTGACTGCATG
AATGTAAGTCAAGCGTCCTCTGTTGTCTCGTACGCCTACTGACGACTAAG
TTCAACGATGCTCTCATCCGACAAGGCTACAACGGCGGGCGCAAGGCTGC
CATGCTTCTTCGAAAGTCTGTCGAGCGTCACATTCGTGATATCGACCCTC
AAGCCAGTCCGAACATCCAATACCGAATTCGAGTGTACGCCAACGTTCCA
GGTCTGATGAAAACGTACCGGGAAGCACACATCCTGCGTTCGAATGAAGC
GCTAGATCCATTCATTCGGGGGTTCAATATGGAGAACAGCTTGTGTGATT
TCATCGATGCGGGAAACGGCAAGGAGTGTTCAGATGTCAAGATACGGGGT
ACGTTGCCCTCTTCACCAGAGCAGACATAGCATGTGCTAACCATCACCAT
AGCAATGTTCGAACAAGACATTCTAGACGTCCACTGCCGTCGCATCGTCT
TCTGTGGCTCCACCGACAATGGCTACGCACGCATCCTCGGCTCCCACCAG
GGGTCCAACCGCATCTCGCTCGTCCAGGGAGCACCCTTTGCATGGGAAAT
GGAGCAGCTTGCGAGCGAGTTCCAAACCACATCCTTTCCCGAGGTCTTCC
GATCCACGAAGCTCCCCTCCCGAGCATCATCCTTCAGCGCATTCAAAACA
GCATCCGCCAACTCCTCACCCAGCAGCTCCCCAACCAGCCTCAGCACGCC
CTCAACGCCTAAACGCAACTATGCCACAATCGCCAAGTCGAATCTCCAGG
CGACATCTCCCACCAGAACAAACAGATCCAAGCGGTCCAAAATCTCAGTA
ATAACATTCGATATCTCCCCCTCGTACGACACCCACATTCAATTCAACAA
AGTCCAGCTCAACAGCAAGAGCCAGCGAGTCGATCCGCCACCCCGGGCCA
GCAGCAAAGACAATTACGAAAGACTACGAAGGTCAAAATACTGCAGTAGA
TATCATATTCTGGGAGAGTGTCTCCTTGGCGATGAGTGCGGGCACAGACA
CGGACGCCGACTGGGATCTAGGGATGTTCATGACCTTTGGTGTGTTACGC
GAACGTGCGTCTGTCCGAATGATATCTGGTGTACGGATCCCAAGTGTATC
TGTGGACATCAGTGTCCGTGGGAAAATCAGCAAGGGCATTGCAGTGGAGA
TTGCAAGTTTCCCGAGTCTATGCATGGGGTTGATAAGTCGGTTGCAGTGA
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Coding sequence (CDS) from alignment at ch4:694204..696203-

>KJC3_004781-T1 ID=KJC3_004781-T1|Name=KJC3_004781-T1|organism=Aspergillus niger KJC3|type=CDS|length=7758bp|location=Sequence derived from alignment at ch4:694204..696203- (Aspergillus niger KJC3)
AGCCAGCGAGTCGATCCGCCACCCCGGGCCAGCAGCAAAGACAATTACGA
AAGACTACGAAGGTCAAAATACTGCAGTAGATATCATATTCTGGGAGAGT
GTCTCCTTGGCGATGAGTGCGGGCACAGACACGGACGCCGACTGGGATCT
AGGGATGTTCATGACCTTTGGTGTGTTACGCGAACGTGCGTCTGTCCGAA
TGATATCTGGTGTACGGATCCCAAGTGTATCTGTGGACATCAGTGTCCGT
GGGAAAATCAGCAAGGGCATTGCAGTGGAGATTGCAAGTTTCCCGAGTCT
ATGCATGGGGTTGATAAGTCGGTTGCAGTGACAATGTTCGAACAAGACAT
TCTAGACGTCCACTGCCGTCGCATCGTCTTCTGTGGCTCCACCGACAATG
GCTACGCACGCATCCTCGGCTCCCACCAGGGGTCCAACCGCATCTCGCTC
GTCCAGGGAGCACCCTTTGCATGGGAAATGGAGCAGCTTGCGAGCGAGTT
CCAAACCACATCCTTTCCCGAGGTCTTCCGATCCACGAAGCTCCCCTCCC
GAGCATCATCCTTCAGCGCATTCAAAACAGCATCCGCCAACTCCTCACCC
AGCAGCTCCCCAACCAGCCTCAGCACGCCCTCAACGCCTAAACGCAACTA
TGCCACAATCGCCAAGTCGAATCTCCAGGCGACATCTCCCACCAGAACAA
ACAGATCCAAGCGGTCCAAAATCTCAGTAATAACATTCGATATCTCCCCC
TCTTCAACGATGCTCTCATCCGACAAGGCTACAACGGCGGGCGCAAGGCT
GCCATGCTTCTTCGAAAGTCTGTCGAGCGTCACATTCGTGATATCGACCC
TCAAGCCAGTCCGAACATCCAATACCGAATTCGAGTGTACGCCAACGTTC
CAGGTCTGATGAAAACGTACCGGGAAGCACACATCCTGCGTTCGAATGAA
GCGCTAGATCCATTCATTCGGGGGTTCAATATGGAGAACAGCTTGTGTGA
TTTCATCGATGCGGGAAACGGCAAGGAGTGTTCAGATGTCAAGATACGGG
GCCAAGTTGAGTTTTGTTTCTGTGCTTGTCGATGGTGACTGCATGAATAA
TCTATTTGCCCAAGTTGAAAGCCTGCAGAAGGCTCTCCAAAATACACTTG
GTGATGCCAAATTCCAAGAACTGAAAAAATACAAGACAGAGTACGACGAT
TTGCGACTTGACCAGATGATAGACCTCCTGGAAGTGAAAAGACGCTACGA
AGCCGTGCTGGCAGTTGAAGATAGCAGAGACAAAATCCTCCAGAGCCAGC
GAGTCGATCCGCCACCCCGGGCCAGCAGCAAAGACAATTACGAAAGACTA
CGAAGGTCAAAATACTGCAGTAGATATCATATTCTGGGAGAGTGTCTCCT
TGGCGATGAGTGCGGGCACAGACACGGACGCCGACTGGGATCTAGGGATG
TTCATGACCTTTGGTGTGTTACGCGAACGTGCGTCTGTCCGAATGATATC
TGGTGTACGGATCCCAAGTGTATCTGTGGACATCAGTGTCCGTGGGAAAA
TCAGCAAGGGCATTGCAGTGGAGATTGCAAGTTTCCCGAGTCTATGCATG
GGGTTGATAAGTCGGTTGCAGTGACAATGTTCGAACAAGACATTCTAGAC
GTCCACTGCCGTCGCATCGTCTTCTGTGGCTCCACCGACAATGGCTACGC
ACGCATCCTCGGCTCCCACCAGGGGTCCAACCGCATCTCGCTCGTCCAGG
GAGCACCCTTTGCATGGGAAATGGAGCAGCTTGCGAGCGAGTTCCAAACC
ACATCCTTTCCCGAGGTCTTCCGATCCACGAAGCTCCCCTCCCGAGCATC
ATCCTTCAGCGCATTCAAAACAGCATCCGCCAACTCCTCACCCAGCAGCT
CCCCAACCAGCCTCAGCACGCCCTCAACGCCTAAACGCAACTATGCCACA
ATCGCCAAGTCGAATCTCCAGGCGACATCTCCCACCAGAACAAACAGATC
CAAGCGGTCCAAAATCTCAGTAATAACATTCGATATCTCCCCCTCTTCAA
CGATGCTCTCATCCGACAAGGCTACAACGGCGGGCGCAAGGCTGCCATGC
TTCTTCGAAAGTCTGTCGAGCGTCACATTCGTGATATCGACCCTCAAGCC
AGTCCGAACATCCAATACCGAATTCGAGTGTACGCCAACGTTCCAGGTCT
GATGAAAACGTACCGGGAAGCACACATCCTGCGTTCGAATGAAGCGCTAG
ATCCATTCATTCGGGGGTTCAATATGGAGAACAGCTTGTGTGATTTCATC
GATGCGGGAAACGGCAAGGAGTGTTCAGATGTCAAGATACGGGGCCAAGT
TGAGTTTTGTTTCTGTGCTTGTCGATGGTGACTGCATGAATAATCTATTT
GCCCAAGTTGAAAGCCTGCAGAAGGCTCTCCAAAATACACTTGGTGATGC
CAAATTCCAAGAACTGAAAAAATACAAGACAGAGTACGACGATTTGCGAC
TTGACCAGATGATAGACCTCCTGGAAGTGAAAAGACGCTACGAAGCCGTG
CTGGCAGTTGAAGATAGCAGAGACAAAATCCTCCAGAGCCAGCGAGTCGA
TCCGCCACCCCGGGCCAGCAGCAAAGACAATTACGAAAGACTACGAAGGT
CAAAATACTGCAGTAGATATCATATTCTGGGAGAGTGTCTCCTTGGCGAT
GAGTGCGGGCACAGACACGGACGCCGACTGGGATCTAGGGATGTTCATGA
CCTTTGGTGTGTTACGCGAACGTGCGTCTGTCCGAATGATATCTGGTGTA
CGGATCCCAAGTGTATCTGTGGACATCAGTGTCCGTGGGAAAATCAGCAA
GGGCATTGCAGTGGAGATTGCAAGTTTCCCGAGTCTATGCATGGGGTTGA
TAAGTCGGTTGCAGTGACAATGTTCGAACAAGACATTCTAGACGTCCACT
GCCGTCGCATCGTCTTCTGTGGCTCCACCGACAATGGCTACGCACGCATC
CTCGGCTCCCACCAGGGGTCCAACCGCATCTCGCTCGTCCAGGGAGCACC
CTTTGCATGGGAAATGGAGCAGCTTGCGAGCGAGTTCCAAACCACATCCT
TTCCCGAGGTCTTCCGATCCACGAAGCTCCCCTCCCGAGCATCATCCTTC
AGCGCATTCAAAACAGCATCCGCCAACTCCTCACCCAGCAGCTCCCCAAC
CAGCCTCAGCACGCCCTCAACGCCTAAACGCAACTATGCCACAATCGCCA
AGTCGAATCTCCAGGCGACATCTCCCACCAGAACAAACAGATCCAAGCGG
TCCAAAATCTCAGTAATAACATTCGATATCTCCCCCTCTTCAACGATGCT
CTCATCCGACAAGGCTACAACGGCGGGCGCAAGGCTGCCATGCTTCTTCG
AAAGTCTGTCGAGCGTCACATTCGTGATATCGACCCTCAAGCCAGTCCGA
ACATCCAATACCGAATTCGAGTGTACGCCAACGTTCCAGGTCTGATGAAA
ACGTACCGGGAAGCACACATCCTGCGTTCGAATGAAGCGCTAGATCCATT
CATTCGGGGGTTCAATATGGAGAACAGCTTGTGTGATTTCATCGATGCGG
GAAACGGCAAGGAGTGTTCAGATGTCAAGATACGGGGCCAAGTTGAGTTT
TGTTTCTGTGCTTGTCGATGGTGACTGCATGAATAATCTATTTGCCCAAG
TTGAAAGCCTGCAGAAGGCTCTCCAAAATACACTTGGTGATGCCAAATTC
CAAGAACTGAAAAAATACAAGACAGAGTACGACGATTTGCGACTTGACCA
GATGATAGACCTCCTGGAAGTGAAAAGACGCTACGAAGCCGTGCTGGCAG
TTGAAGATAGCAGAGACAAAATCCTCCAGAGCCAGCGAGTCGATCCGCCA
CCCCGGGCCAGCAGCAAAGACAATTACGAAAGACTACGAAGGTCAAAATA
CTGCAGTAGATATCATATTCTGGGAGAGTGTCTCCTTGGCGATGAGTGCG
GGCACAGACACGGACGCCGACTGGGATCTAGGGATGTTCATGACCTTTGG
TGTGTTACGCGAACGTGCGTCTGTCCGAATGATATCTGGTGTACGGATCC
CAAGTGTATCTGTGGACATCAGTGTCCGTGGGAAAATCAGCAAGGGCATT
GCAGTGGAGATTGCAAGTTTCCCGAGTCTATGCATGGGGTTGATAAGTCG
GTTGCAGTGACAATGTTCGAACAAGACATTCTAGACGTCCACTGCCGTCG
CATCGTCTTCTGTGGCTCCACCGACAATGGCTACGCACGCATCCTCGGCT
CCCACCAGGGGTCCAACCGCATCTCGCTCGTCCAGGGAGCACCCTTTGCA
TGGGAAATGGAGCAGCTTGCGAGCGAGTTCCAAACCACATCCTTTCCCGA
GGTCTTCCGATCCACGAAGCTCCCCTCCCGAGCATCATCCTTCAGCGCAT
TCAAAACAGCATCCGCCAACTCCTCACCCAGCAGCTCCCCAACCAGCCTC
AGCACGCCCTCAACGCCTAAACGCAACTATGCCACAATCGCCAAGTCGAA
TCTCCAGGCGACATCTCCCACCAGAACAAACAGATCCAAGCGGTCCAAAA
TCTCAGTAATAACATTCGATATCTCCCCCTCTTCAACGATGCTCTCATCC
GACAAGGCTACAACGGCGGGCGCAAGGCTGCCATGCTTCTTCGAAAGTCT
GTCGAGCGTCACATTCGTGATATCGACCCTCAAGCCAGTCCGAACATCCA
ATACCGAATTCGAGTGTACGCCAACGTTCCAGGTCTGATGAAAACGTACC
GGGAAGCACACATCCTGCGTTCGAATGAAGCGCTAGATCCATTCATTCGG
GGGTTCAATATGGAGAACAGCTTGTGTGATTTCATCGATGCGGGAAACGG
CAAGGAGTGTTCAGATGTCAAGATACGGGGCCAAGTTGAGTTTTGTTTCT
GTGCTTGTCGATGGTGACTGCATGAATAATCTATTTGCCCAAGTTGAAAG
CCTGCAGAAGGCTCTCCAAAATACACTTGGTGATGCCAAATTCCAAGAAC
TGAAAAAATACAAGACAGAGTACGACGATTTGCGACTTGACCAGATGATA
GACCTCCTGGAAGTGAAAAGACGCTACGAAGCCGTGCTGGCAGTTGAAGA
TAGCAGAGACAAAATCCTCCAGAGCCAGCGAGTCGATCCGCCACCCCGGG
CCAGCAGCAAAGACAATTACGAAAGACTACGAAGGTCAAAATACTGCAGT
AGATATCATATTCTGGGAGAGTGTCTCCTTGGCGATGAGTGCGGGCACAG
ACACGGACGCCGACTGGGATCTAGGGATGTTCATGACCTTTGGTGTGTTA
CGCGAACGTGCGTCTGTCCGAATGATATCTGGTGTACGGATCCCAAGTGT
ATCTGTGGACATCAGTGTCCGTGGGAAAATCAGCAAGGGCATTGCAGTGG
AGATTGCAAGTTTCCCGAGTCTATGCATGGGGTTGATAAGTCGGTTGCAG
TGACAATGTTCGAACAAGACATTCTAGACGTCCACTGCCGTCGCATCGTC
TTCTGTGGCTCCACCGACAATGGCTACGCACGCATCCTCGGCTCCCACCA
GGGGTCCAACCGCATCTCGCTCGTCCAGGGAGCACCCTTTGCATGGGAAA
TGGAGCAGCTTGCGAGCGAGTTCCAAACCACATCCTTTCCCGAGGTCTTC
CGATCCACGAAGCTCCCCTCCCGAGCATCATCCTTCAGCGCATTCAAAAC
AGCATCCGCCAACTCCTCACCCAGCAGCTCCCCAACCAGCCTCAGCACGC
CCTCAACGCCTAAACGCAACTATGCCACAATCGCCAAGTCGAATCTCCAG
GCGACATCTCCCACCAGAACAAACAGATCCAAGCGGTCCAAAATCTCAGT
AATAACATTCGATATCTCCCCCTCTTCAACGATGCTCTCATCCGACAAGG
CTACAACGGCGGGCGCAAGGCTGCCATGCTTCTTCGAAAGTCTGTCGAGC
GTCACATTCGTGATATCGACCCTCAAGCCAGTCCGAACATCCAATACCGA
ATTCGAGTGTACGCCAACGTTCCAGGTCTGATGAAAACGTACCGGGAAGC
ACACATCCTGCGTTCGAATGAAGCGCTAGATCCATTCATTCGGGGGTTCA
ATATGGAGAACAGCTTGTGTGATTTCATCGATGCGGGAAACGGCAAGGAG
TGTTCAGATGTCAAGATACGGGGCCAAGTTGAGTTTTGTTTCTGTGCTTG
TCGATGGTGACTGCATGAATAATCTATTTGCCCAAGTTGAAAGCCTGCAG
AAGGCTCTCCAAAATACACTTGGTGATGCCAAATTCCAAGAACTGAAAAA
ATACAAGACAGAGTACGACGATTTGCGACTTGACCAGATGATAGACCTCC
TGGAAGTGAAAAGACGCTACGAAGCCGTGCTGGCAGTTGAAGATAGCAGA
GACAAAATCCTCCAGAGCCAGCGAGTCGATCCGCCACCCCGGGCCAGCAG
CAAAGACAATTACGAAAGACTACGAAGGTCAAAATACTGCAGTAGATATC
ATATTCTGGGAGAGTGTCTCCTTGGCGATGAGTGCGGGCACAGACACGGA
CGCCGACTGGGATCTAGGGATGTTCATGACCTTTGGTGTGTTACGCGAAC
GTGCGTCTGTCCGAATGATATCTGGTGTACGGATCCCAAGTGTATCTGTG
GACATCAGTGTCCGTGGGAAAATCAGCAAGGGCATTGCAGTGGAGATTGC
AAGTTTCCCGAGTCTATGCATGGGGTTGATAAGTCGGTTGCAGTGACAAT
GTTCGAACAAGACATTCTAGACGTCCACTGCCGTCGCATCGTCTTCTGTG
GCTCCACCGACAATGGCTACGCACGCATCCTCGGCTCCCACCAGGGGTCC
AACCGCATCTCGCTCGTCCAGGGAGCACCCTTTGCATGGGAAATGGAGCA
GCTTGCGAGCGAGTTCCAAACCACATCCTTTCCCGAGGTCTTCCGATCCA
CGAAGCTCCCCTCCCGAGCATCATCCTTCAGCGCATTCAAAACAGCATCC
GCCAACTCCTCACCCAGCAGCTCCCCAACCAGCCTCAGCACGCCCTCAAC
GCCTAAACGCAACTATGCCACAATCGCCAAGTCGAATCTCCAGGCGACAT
CTCCCACCAGAACAAACAGATCCAAGCGGTCCAAAATCTCAGTAATAACA
TTCGATATCTCCCCCTCTTCAACGATGCTCTCATCCGACAAGGCTACAAC
GGCGGGCGCAAGGCTGCCATGCTTCTTCGAAAGTCTGTCGAGCGTCACAT
TCGTGATATCGACCCTCAAGCCAGTCCGAACATCCAATACCGAATTCGAG
TGTACGCCAACGTTCCAGGTCTGATGAAAACGTACCGGGAAGCACACATC
CTGCGTTCGAATGAAGCGCTAGATCCATTCATTCGGGGGTTCAATATGGA
GAACAGCTTGTGTGATTTCATCGATGCGGGAAACGGCAAGGAGTGTTCAG
ATGTCAAGATACGGGGCCAAGTTGAGTTTTGTTTCTGTGCTTGTCGATGG
TGACTGCATGAATAATCTATTTGCCCAAGTTGAAAGCCTGCAGAAGGCTC
TCCAAAATACACTTGGTGATGCCAAATTCCAAGAACTGAAAAAATACAAG
ACAGAGTACGACGATTTGCGACTTGACCAGATGATAGACCTCCTGGAAGT
GAAAAGACGCTACGAAGCCGTGCTGGCAGTTGAAGATAGCAGAGACAAAA
TCCTCCAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004781KJC3_004781Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004781-T1KJC3_004781-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004781-T1.cdsKJC3_004781-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004781-T1.exon6KJC3_004781-T1.exon6Aspergillus niger KJC3exon
KJC3_004781-T1.exon5KJC3_004781-T1.exon5Aspergillus niger KJC3exon
KJC3_004781-T1.exon4KJC3_004781-T1.exon4Aspergillus niger KJC3exon
KJC3_004781-T1.exon3KJC3_004781-T1.exon3Aspergillus niger KJC3exon
KJC3_004781-T1.exon2KJC3_004781-T1.exon2Aspergillus niger KJC3exon
KJC3_004781-T1.exon1KJC3_004781-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004781-T1.utr5p1KJC3_004781-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:694204..696203 -
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