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KJC3_004782-T1, KJC3_004782-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004782-T1
Unique NameKJC3_004782-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:696709..698741-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004782-T1 ID=KJC3_004782-T1|Name=KJC3_004782-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2033bp|location=Sequence derived from alignment at ch4:696709..698741- (Aspergillus niger KJC3)
ATGCCAGGTAGCTGTCGTTGAAGACGAGGCTGCCAGAGGAGCATATAAAT
TGTAGATAGAATCAGAAATGAGATCCAAGTTCCTCTTCAATCAACAATAA
TATAGGAATACTGCTAATCTTGTCAGCACGATGGCACTTCACGAGCGACG
TTTCCCCACGTTCCTGCGCCGTCTCCTTGGAGAAACAACCCAAATCACCT
CGATCCCTCCTCCAGACTTATTCAAGACATTATCCTTCGAGTTGAATGAC
GCGAGTCCCACTCAAGGAAGCAAGAACGATATCCCAACGATCGGAGAATG
TGCCGTCCATCTCGAACTGCTCGAAGTGTTCCGTAACCTGCGTATCCAAG
TCATCCAGTCCAAGGAATTAGACCACGTATTCCGTCTCGATTCAAATCGC
TTATGGATATCGAAACATCGTAGAGCAACACAGAGGACGAAAACGTGGCA
CTGTTTCGTGTCGCTTGCTGTTGAGAAATTCCAGGTCTGGATCCGTGCTG
CGGAGAAGCAGCTTGAGGGTGATGGAAACAATGGAACGCTTATACTTCCC
CCTGTTGGTAAGTTCCATTGTCGACCATAATGGGCGTATCCAGTTACTGA
AACTGTCAGACATACTCATGGTCTGGCACGCATTCTTGCTCAATCCATCC
GATTACAAGGAATTCTGTACACGCCATCAGCTTGATCGGATTCAGGAAGT
GCCTTTTCCTTGGCCTGTCATCGTAAGTTGGCACAAGGGATTGAACTGTG
ATACTAACATGCTAAGCAACTACTGCCATGCAGCACGGCTGTATCGACCC
AACCAACTGGTCATTAACCCTCCCCAGCGCGAACAAACAATGGCTCGAAT
CTACAGCAAACATAACAACAGACCCTCTTATCAGTCTCACAGATACTATC
AGCAAAATCCAGTCTACACCAAACCAAACAAACCAAAGAACCATCCCATC
AATATCCCCCGAAAACGAAGCCCTCCTGCACAACGTTCTCCGCCAAACGA
ACTTCATCGACCAGATGCACGACTGTCTCTGGATTCTCTATCCCGATGCC
GAAGAGATACTAGAGAGCGCTCGAAAACGCTACAACAACTTCGTTGAGTT
ATTACGTCTTCATCCCGGCGTTATGCTCGTCCCGACGTTGGATATAGATC
TAGTCTGGCATACGCATCTGTGTAGTGCGGCGCGGTACAGGAATTCCATG
ATGAAAAGGGTGGGGCGGTTTATCAATCACGACGATAAGTTGGGGAAGCG
TACGTTGTATGATGGATTTGAGAGGACGAAAGAACTGTATGAGGAGCTGG
AGAGTCGTGGGGGAGCTTAGCTGTGAAGGGTGTTCTTGTTGCCGTGTTGT
GGTATGAATTATGTGGGATGATCACAGAAGCAATAGAATGGGATCGGATG
GTAGTCTGAAACGATTGTACTATTTTAGTATCCTCTTATTGAAGTGGCTT
CTGGAGCTTGGAAGAAGTAAATGATCAACACGTGCGATGGCCTGCACACG
TCGGTTGACAATGTCAATTATTATAGGATAAATCTCGATATTTTAGTAGC
TTGTCCAAGCCCGCAGGCATAAACATGGTCCTCAATCCTAGGCCCATGGA
TCGTGATTGCTTGAAGATCAGTCGGCAATATTGCGAAGGATTCCCAAAGC
CCATACGCTTGATCAACCATTCTCATCGGAGCCCTTGGGTCCACGGTCAG
CATCCTCGATTCTCTAGCGATGTTGCGTATGCATTTTCTTGATTCCGTTA
TCCTGGATATTACCTTCCATCTCAAAACGAGCCATGTACTGTGAGGTCTC
ATAAACCTCAACGTGGTTGGTATGAAGTCAAGTATCAGGATAAAAAGCTT
GAGTGAGGGTTAGGATCAATGACGACTTCTCTTCCTCGCTAACTTTGATA
TCGACTGAAGGGAGGAAGAGGTGCAGTTGCCAGCAAGGGCAAATTATATA
AACACGCATGCTGTGTAGGCATCCATCAGCTTTGAGAAAATAAATAGTCT
CATTGTCTGAGACTCGCGGCCATGTTTGTTGCC
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Coding sequence (CDS) from alignment at ch4:696709..698741-

>KJC3_004782-T1 ID=KJC3_004782-T1|Name=KJC3_004782-T1|organism=Aspergillus niger KJC3|type=CDS|length=3231bp|location=Sequence derived from alignment at ch4:696709..698741- (Aspergillus niger KJC3)
CACGGCTGTATCGACCCAACCAACTGGTCATTAACCCTCCCCAGCGCGAA
CAAACAATGGCTCGAATCTACAGCAAACATAACAACAGACCCTCTTATCA
GTCTCACAGATACTATCAGCAAAATCCAGTCTACACCAAACCAAACAAAC
CAAAGAACCATCCCATCAATATCCCCCGAAAACGAAGCCCTCCTGCACAA
CGTTCTCCGCCAAACGAACTTCATCGACCAGATGCACGACTGTCTCTGGA
TTCTCTATCCCGATGCCGAAGAGATACTAGAGAGCGCTCGAAAACGCTAC
AACAACTTCGTTGAGTTATTACGTCTTCATCCCGGCGTTATGCTCGTCCC
GACGTTGGATATAGATCTAGTCTGGCATACGCATCTGTGTAGTGCGGCGC
GGTACAGGAATTCCATGATGAAAAGGGTGGGGCGGTTTATCAATCACGAC
GATAAGTTGGGGAAGCGTACGTTGTATGATGGATTTGAGAGGACGAAAGA
ACTGTATGAGGAGCTGGAGAGTCGTGGGGGAGCTTAGACATACTCATGGT
CTGGCACGCATTCTTGCTCAATCCATCCGATTACAAGGAATTCTGTACAC
GCCATCAGCTTGATCGGATTCAGGAAGTGCCTTTTCCTTGGCCTGTCATC
ATGGCACTTCACGAGCGACGTTTCCCCACGTTCCTGCGCCGTCTCCTTGG
AGAAACAACCCAAATCACCTCGATCCCTCCTCCAGACTTATTCAAGACAT
TATCCTTCGAGTTGAATGACGCGAGTCCCACTCAAGGAAGCAAGAACGAT
ATCCCAACGATCGGAGAATGTGCCGTCCATCTCGAACTGCTCGAAGTGTT
CCGTAACCTGCGTATCCAAGTCATCCAGTCCAAGGAATTAGACCACGTAT
TCCGTCTCGATTCAAATCGCTTATGGATATCGAAACATCGTAGAGCAACA
CAGAGGACGAAAACGTGGCACTGTTTCGTGTCGCTTGCTGTTGAGAAATT
CCAGGTCTGGATCCGTGCTGCGGAGAAGCAGCTTGAGGGTGATGGAAACA
ATGGAACGCTTATACTTCCCCCTGTTGCACGGCTGTATCGACCCAACCAA
CTGGTCATTAACCCTCCCCAGCGCGAACAAACAATGGCTCGAATCTACAG
CAAACATAACAACAGACCCTCTTATCAGTCTCACAGATACTATCAGCAAA
ATCCAGTCTACACCAAACCAAACAAACCAAAGAACCATCCCATCAATATC
CCCCGAAAACGAAGCCCTCCTGCACAACGTTCTCCGCCAAACGAACTTCA
TCGACCAGATGCACGACTGTCTCTGGATTCTCTATCCCGATGCCGAAGAG
ATACTAGAGAGCGCTCGAAAACGCTACAACAACTTCGTTGAGTTATTACG
TCTTCATCCCGGCGTTATGCTCGTCCCGACGTTGGATATAGATCTAGTCT
GGCATACGCATCTGTGTAGTGCGGCGCGGTACAGGAATTCCATGATGAAA
AGGGTGGGGCGGTTTATCAATCACGACGATAAGTTGGGGAAGCGTACGTT
GTATGATGGATTTGAGAGGACGAAAGAACTGTATGAGGAGCTGGAGAGTC
GTGGGGGAGCTTAGACATACTCATGGTCTGGCACGCATTCTTGCTCAATC
CATCCGATTACAAGGAATTCTGTACACGCCATCAGCTTGATCGGATTCAG
GAAGTGCCTTTTCCTTGGCCTGTCATCATGGCACTTCACGAGCGACGTTT
CCCCACGTTCCTGCGCCGTCTCCTTGGAGAAACAACCCAAATCACCTCGA
TCCCTCCTCCAGACTTATTCAAGACATTATCCTTCGAGTTGAATGACGCG
AGTCCCACTCAAGGAAGCAAGAACGATATCCCAACGATCGGAGAATGTGC
CGTCCATCTCGAACTGCTCGAAGTGTTCCGTAACCTGCGTATCCAAGTCA
TCCAGTCCAAGGAATTAGACCACGTATTCCGTCTCGATTCAAATCGCTTA
TGGATATCGAAACATCGTAGAGCAACACAGAGGACGAAAACGTGGCACTG
TTTCGTGTCGCTTGCTGTTGAGAAATTCCAGGTCTGGATCCGTGCTGCGG
AGAAGCAGCTTGAGGGTGATGGAAACAATGGAACGCTTATACTTCCCCCT
GTTGCACGGCTGTATCGACCCAACCAACTGGTCATTAACCCTCCCCAGCG
CGAACAAACAATGGCTCGAATCTACAGCAAACATAACAACAGACCCTCTT
ATCAGTCTCACAGATACTATCAGCAAAATCCAGTCTACACCAAACCAAAC
AAACCAAAGAACCATCCCATCAATATCCCCCGAAAACGAAGCCCTCCTGC
ACAACGTTCTCCGCCAAACGAACTTCATCGACCAGATGCACGACTGTCTC
TGGATTCTCTATCCCGATGCCGAAGAGATACTAGAGAGCGCTCGAAAACG
CTACAACAACTTCGTTGAGTTATTACGTCTTCATCCCGGCGTTATGCTCG
TCCCGACGTTGGATATAGATCTAGTCTGGCATACGCATCTGTGTAGTGCG
GCGCGGTACAGGAATTCCATGATGAAAAGGGTGGGGCGGTTTATCAATCA
CGACGATAAGTTGGGGAAGCGTACGTTGTATGATGGATTTGAGAGGACGA
AAGAACTGTATGAGGAGCTGGAGAGTCGTGGGGGAGCTTAGACATACTCA
TGGTCTGGCACGCATTCTTGCTCAATCCATCCGATTACAAGGAATTCTGT
ACACGCCATCAGCTTGATCGGATTCAGGAAGTGCCTTTTCCTTGGCCTGT
CATCATGGCACTTCACGAGCGACGTTTCCCCACGTTCCTGCGCCGTCTCC
TTGGAGAAACAACCCAAATCACCTCGATCCCTCCTCCAGACTTATTCAAG
ACATTATCCTTCGAGTTGAATGACGCGAGTCCCACTCAAGGAAGCAAGAA
CGATATCCCAACGATCGGAGAATGTGCCGTCCATCTCGAACTGCTCGAAG
TGTTCCGTAACCTGCGTATCCAAGTCATCCAGTCCAAGGAATTAGACCAC
GTATTCCGTCTCGATTCAAATCGCTTATGGATATCGAAACATCGTAGAGC
AACACAGAGGACGAAAACGTGGCACTGTTTCGTGTCGCTTGCTGTTGAGA
AATTCCAGGTCTGGATCCGTGCTGCGGAGAAGCAGCTTGAGGGTGATGGA
AACAATGGAACGCTTATACTTCCCCCTGTTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004782KJC3_004782Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004782-T1KJC3_004782-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004782-T1.cdsKJC3_004782-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004782-T1.utr3p1KJC3_004782-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004782-T1.exon3KJC3_004782-T1.exon3Aspergillus niger KJC3exon
KJC3_004782-T1.exon2KJC3_004782-T1.exon2Aspergillus niger KJC3exon
KJC3_004782-T1.exon1KJC3_004782-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004782-T1.utr5p1KJC3_004782-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR009836
DBxrefPFAM:PF07173
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:696709..698741 -
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