You are here

Home

KJC3_004786-T1, KJC3_004786-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004786-T1
Unique NameKJC3_004786-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:708708..710318-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004786-T1 ID=KJC3_004786-T1|Name=KJC3_004786-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1611bp|location=Sequence derived from alignment at ch4:708708..710318- (Aspergillus niger KJC3)
CTATCTACTTCGTATTCTTTATCCAAATCCCTTCGACTCTCCATCACCAA
GATATCCAGCAATACTATCGAGATCATCAATCAATAACCCTTCATAATCA
GTAAAGCGATCACCATGACCATCAAATCTGGACTCGACTACATCCGCTCT
CGCTCCATTGTCGACTGCGACACCATGGACGAGCAAGGCACGTATCTCGC
TTCCATGCACCTTTTACTATTTGCTAATATAAAAGCACAGTCGCCAAAAC
CTTTGGTCCCTTTCACGACTGCACCTCCAACCAGGTATATACATACAATC
CACTGCACTCACCCCACCATACCACTCGGCTAACAACAACACCAGGCAAT
AGCCTACAACGAACTCATCAAGCCCGAACATGATGAGCTTCTCCACTCCT
CTCTCACCCAAGCCAAAGCCCTCATCCAAGAATACCCTGGTCTAACCATC
GAAGAACTTGCCATCGAGATAGCAGTGAGTATACCCTGCCCTTCTCTTCA
CCACCATCAACAAACACTACTAAATAATACATCTATCAAAAAAGATGATT
TCCCTCTCCCTAAGAATCGCCCCTGACATCACCGGCCACATCCACATCCA
AACAAACCCCTACTACTCATACTCCACCGAAAAGACCATCGTCAACGCCC
TCCGTACGTGCATACAACTATCCCCTCTACATACAATACCCCATCTCTAA
CCGCAACAAAAACAGGCATAGTCAAACTAACCCACCGCCTCTCCCCCACC
CACCCCCAATCCCACATCTGCATCAAAATCCCCAGCACCTGGGAGGGTCT
CAAAGCATGCCAAGTACTCGAACAAGCCGGGGTCCGAACCCTAGCCACAA
CCCTTTTCACCATGCCTCAAGCCATCCTAGCAGCAGAAGTAGGATGCACG
TACATAGCACCATACGTGAACCAACTGAGAGTCCATTTCGAGCCAGGGTA
GATATATACCCCCCAAATACTCACCATCAACACAACCCACATAATCTATA
TATTGGTACTGACAATTCATCACAGCTTCAAAGACCCCTCCCCCCTCCTC
CACTTCAGCGCCCTGGCCCAGAAATATTACGCCTCCATCGGATCCCAAAC
ACAGGTATTACCCGCTAGTCTGACGTCCACGAACGAGATCTTCGCGTTGG
CGGGTGTACAGCACATTACTATCGCACCGGGATTATTGGAAGAGTTGGCC
AAGCCGTTGGAGGGGAAGGTACCTGTGGAGTCGTTGTTTGATTCCCCTGC
TGTGGTGGAGGGGGCTGTGCCGGGTAAGGAAGTGTCGTATGTGAATGATG
AGTCTGGGTATCGGATTGCGTTTACGAGGGATGCGGGTGGGTTGAGTGAG
GAGAAACTTACTCAGGTAAGCTATTTACTTTTGATATTGGGGGTAGATGG
GTGGAGTAGAATATTTGAGTGGTTGATCTGTTGCTAATGGTTTATACTAC
TATCTAGGCTGTGAATATCTTCTGTGATATGCAAGACAAGTTGGTTCAGG
TATTCAAGGGGTTGAATTGAGTTAAGGGGAGGGTGGCAGTGAGATACTAC
TAGCTACGTAATTGAGGTTGGGTTTATAGGATACACCTCTACACTCAAGT
TCAAACCAGAC
back to top

Coding sequence (CDS) from alignment at ch4:708708..710318-

>KJC3_004786-T1 ID=KJC3_004786-T1|Name=KJC3_004786-T1|organism=Aspergillus niger KJC3|type=CDS|length=6930bp|location=Sequence derived from alignment at ch4:708708..710318- (Aspergillus niger KJC3)
GCTGTGAATATCTTCTGTGATATGCAAGACAAGTTGGTTCAGGTATTCAA
GGGGTTGAATTGACTTCAAAGACCCCTCCCCCCTCCTCCACTTCAGCGCC
CTGGCCCAGAAATATTACGCCTCCATCGGATCCCAAACACAGGTATTACC
CGCTAGTCTGACGTCCACGAACGAGATCTTCGCGTTGGCGGGTGTACAGC
ACATTACTATCGCACCGGGATTATTGGAAGAGTTGGCCAAGCCGTTGGAG
GGGAAGGTACCTGTGGAGTCGTTGTTTGATTCCCCTGCTGTGGTGGAGGG
GGCTGTGCCGGGTAAGGAAGTGTCGTATGTGAATGATGAGTCTGGGTATC
GGATTGCGTTTACGAGGGATGCGGGTGGGTTGAGTGAGGAGAAACTTACT
CAGGCATAGTCAAACTAACCCACCGCCTCTCCCCCACCCACCCCCAATCC
CACATCTGCATCAAAATCCCCAGCACCTGGGAGGGTCTCAAAGCATGCCA
AGTACTCGAACAAGCCGGGGTCCGAACCCTAGCCACAACCCTTTTCACCA
TGCCTCAAGCCATCCTAGCAGCAGAAGTAGGATGCACGTACATAGCACCA
TACGTGAACCAACTGAGAGTCCATTTCGAGCCAGGATGATTTCCCTCTCC
CTAAGAATCGCCCCTGACATCACCGGCCACATCCACATCCAAACAAACCC
CTACTACTCATACTCCACCGAAAAGACCATCGTCAACGCCCTCCGCAATA
GCCTACAACGAACTCATCAAGCCCGAACATGATGAGCTTCTCCACTCCTC
TCTCACCCAAGCCAAAGCCCTCATCCAAGAATACCCTGGTCTAACCATCG
AAGAACTTGCCATCGAGATAGCATCGCCAAAACCTTTGGTCCCTTTCACG
ACTGCACCTCCAACCAGATGACCATCAAATCTGGACTCGACTACATCCGC
TCTCGCTCCATTGTCGACTGCGACACCATGGACGAGCAAGGCTGTGAATA
TCTTCTGTGATATGCAAGACAAGTTGGTTCAGGTATTCAAGGGGTTGAAT
TGACTTCAAAGACCCCTCCCCCCTCCTCCACTTCAGCGCCCTGGCCCAGA
AATATTACGCCTCCATCGGATCCCAAACACAGGTATTACCCGCTAGTCTG
ACGTCCACGAACGAGATCTTCGCGTTGGCGGGTGTACAGCACATTACTAT
CGCACCGGGATTATTGGAAGAGTTGGCCAAGCCGTTGGAGGGGAAGGTAC
CTGTGGAGTCGTTGTTTGATTCCCCTGCTGTGGTGGAGGGGGCTGTGCCG
GGTAAGGAAGTGTCGTATGTGAATGATGAGTCTGGGTATCGGATTGCGTT
TACGAGGGATGCGGGTGGGTTGAGTGAGGAGAAACTTACTCAGGCATAGT
CAAACTAACCCACCGCCTCTCCCCCACCCACCCCCAATCCCACATCTGCA
TCAAAATCCCCAGCACCTGGGAGGGTCTCAAAGCATGCCAAGTACTCGAA
CAAGCCGGGGTCCGAACCCTAGCCACAACCCTTTTCACCATGCCTCAAGC
CATCCTAGCAGCAGAAGTAGGATGCACGTACATAGCACCATACGTGAACC
AACTGAGAGTCCATTTCGAGCCAGGATGATTTCCCTCTCCCTAAGAATCG
CCCCTGACATCACCGGCCACATCCACATCCAAACAAACCCCTACTACTCA
TACTCCACCGAAAAGACCATCGTCAACGCCCTCCGCAATAGCCTACAACG
AACTCATCAAGCCCGAACATGATGAGCTTCTCCACTCCTCTCTCACCCAA
GCCAAAGCCCTCATCCAAGAATACCCTGGTCTAACCATCGAAGAACTTGC
CATCGAGATAGCATCGCCAAAACCTTTGGTCCCTTTCACGACTGCACCTC
CAACCAGATGACCATCAAATCTGGACTCGACTACATCCGCTCTCGCTCCA
TTGTCGACTGCGACACCATGGACGAGCAAGGCTGTGAATATCTTCTGTGA
TATGCAAGACAAGTTGGTTCAGGTATTCAAGGGGTTGAATTGACTTCAAA
GACCCCTCCCCCCTCCTCCACTTCAGCGCCCTGGCCCAGAAATATTACGC
CTCCATCGGATCCCAAACACAGGTATTACCCGCTAGTCTGACGTCCACGA
ACGAGATCTTCGCGTTGGCGGGTGTACAGCACATTACTATCGCACCGGGA
TTATTGGAAGAGTTGGCCAAGCCGTTGGAGGGGAAGGTACCTGTGGAGTC
GTTGTTTGATTCCCCTGCTGTGGTGGAGGGGGCTGTGCCGGGTAAGGAAG
TGTCGTATGTGAATGATGAGTCTGGGTATCGGATTGCGTTTACGAGGGAT
GCGGGTGGGTTGAGTGAGGAGAAACTTACTCAGGCATAGTCAAACTAACC
CACCGCCTCTCCCCCACCCACCCCCAATCCCACATCTGCATCAAAATCCC
CAGCACCTGGGAGGGTCTCAAAGCATGCCAAGTACTCGAACAAGCCGGGG
TCCGAACCCTAGCCACAACCCTTTTCACCATGCCTCAAGCCATCCTAGCA
GCAGAAGTAGGATGCACGTACATAGCACCATACGTGAACCAACTGAGAGT
CCATTTCGAGCCAGGATGATTTCCCTCTCCCTAAGAATCGCCCCTGACAT
CACCGGCCACATCCACATCCAAACAAACCCCTACTACTCATACTCCACCG
AAAAGACCATCGTCAACGCCCTCCGCAATAGCCTACAACGAACTCATCAA
GCCCGAACATGATGAGCTTCTCCACTCCTCTCTCACCCAAGCCAAAGCCC
TCATCCAAGAATACCCTGGTCTAACCATCGAAGAACTTGCCATCGAGATA
GCATCGCCAAAACCTTTGGTCCCTTTCACGACTGCACCTCCAACCAGATG
ACCATCAAATCTGGACTCGACTACATCCGCTCTCGCTCCATTGTCGACTG
CGACACCATGGACGAGCAAGGCTGTGAATATCTTCTGTGATATGCAAGAC
AAGTTGGTTCAGGTATTCAAGGGGTTGAATTGACTTCAAAGACCCCTCCC
CCCTCCTCCACTTCAGCGCCCTGGCCCAGAAATATTACGCCTCCATCGGA
TCCCAAACACAGGTATTACCCGCTAGTCTGACGTCCACGAACGAGATCTT
CGCGTTGGCGGGTGTACAGCACATTACTATCGCACCGGGATTATTGGAAG
AGTTGGCCAAGCCGTTGGAGGGGAAGGTACCTGTGGAGTCGTTGTTTGAT
TCCCCTGCTGTGGTGGAGGGGGCTGTGCCGGGTAAGGAAGTGTCGTATGT
GAATGATGAGTCTGGGTATCGGATTGCGTTTACGAGGGATGCGGGTGGGT
TGAGTGAGGAGAAACTTACTCAGGCATAGTCAAACTAACCCACCGCCTCT
CCCCCACCCACCCCCAATCCCACATCTGCATCAAAATCCCCAGCACCTGG
GAGGGTCTCAAAGCATGCCAAGTACTCGAACAAGCCGGGGTCCGAACCCT
AGCCACAACCCTTTTCACCATGCCTCAAGCCATCCTAGCAGCAGAAGTAG
GATGCACGTACATAGCACCATACGTGAACCAACTGAGAGTCCATTTCGAG
CCAGGATGATTTCCCTCTCCCTAAGAATCGCCCCTGACATCACCGGCCAC
ATCCACATCCAAACAAACCCCTACTACTCATACTCCACCGAAAAGACCAT
CGTCAACGCCCTCCGCAATAGCCTACAACGAACTCATCAAGCCCGAACAT
GATGAGCTTCTCCACTCCTCTCTCACCCAAGCCAAAGCCCTCATCCAAGA
ATACCCTGGTCTAACCATCGAAGAACTTGCCATCGAGATAGCATCGCCAA
AACCTTTGGTCCCTTTCACGACTGCACCTCCAACCAGATGACCATCAAAT
CTGGACTCGACTACATCCGCTCTCGCTCCATTGTCGACTGCGACACCATG
GACGAGCAAGGCTGTGAATATCTTCTGTGATATGCAAGACAAGTTGGTTC
AGGTATTCAAGGGGTTGAATTGACTTCAAAGACCCCTCCCCCCTCCTCCA
CTTCAGCGCCCTGGCCCAGAAATATTACGCCTCCATCGGATCCCAAACAC
AGGTATTACCCGCTAGTCTGACGTCCACGAACGAGATCTTCGCGTTGGCG
GGTGTACAGCACATTACTATCGCACCGGGATTATTGGAAGAGTTGGCCAA
GCCGTTGGAGGGGAAGGTACCTGTGGAGTCGTTGTTTGATTCCCCTGCTG
TGGTGGAGGGGGCTGTGCCGGGTAAGGAAGTGTCGTATGTGAATGATGAG
TCTGGGTATCGGATTGCGTTTACGAGGGATGCGGGTGGGTTGAGTGAGGA
GAAACTTACTCAGGCATAGTCAAACTAACCCACCGCCTCTCCCCCACCCA
CCCCCAATCCCACATCTGCATCAAAATCCCCAGCACCTGGGAGGGTCTCA
AAGCATGCCAAGTACTCGAACAAGCCGGGGTCCGAACCCTAGCCACAACC
CTTTTCACCATGCCTCAAGCCATCCTAGCAGCAGAAGTAGGATGCACGTA
CATAGCACCATACGTGAACCAACTGAGAGTCCATTTCGAGCCAGGATGAT
TTCCCTCTCCCTAAGAATCGCCCCTGACATCACCGGCCACATCCACATCC
AAACAAACCCCTACTACTCATACTCCACCGAAAAGACCATCGTCAACGCC
CTCCGCAATAGCCTACAACGAACTCATCAAGCCCGAACATGATGAGCTTC
TCCACTCCTCTCTCACCCAAGCCAAAGCCCTCATCCAAGAATACCCTGGT
CTAACCATCGAAGAACTTGCCATCGAGATAGCATCGCCAAAACCTTTGGT
CCCTTTCACGACTGCACCTCCAACCAGATGACCATCAAATCTGGACTCGA
CTACATCCGCTCTCGCTCCATTGTCGACTGCGACACCATGGACGAGCAAG
GCTGTGAATATCTTCTGTGATATGCAAGACAAGTTGGTTCAGGTATTCAA
GGGGTTGAATTGACTTCAAAGACCCCTCCCCCCTCCTCCACTTCAGCGCC
CTGGCCCAGAAATATTACGCCTCCATCGGATCCCAAACACAGGTATTACC
CGCTAGTCTGACGTCCACGAACGAGATCTTCGCGTTGGCGGGTGTACAGC
ACATTACTATCGCACCGGGATTATTGGAAGAGTTGGCCAAGCCGTTGGAG
GGGAAGGTACCTGTGGAGTCGTTGTTTGATTCCCCTGCTGTGGTGGAGGG
GGCTGTGCCGGGTAAGGAAGTGTCGTATGTGAATGATGAGTCTGGGTATC
GGATTGCGTTTACGAGGGATGCGGGTGGGTTGAGTGAGGAGAAACTTACT
CAGGCATAGTCAAACTAACCCACCGCCTCTCCCCCACCCACCCCCAATCC
CACATCTGCATCAAAATCCCCAGCACCTGGGAGGGTCTCAAAGCATGCCA
AGTACTCGAACAAGCCGGGGTCCGAACCCTAGCCACAACCCTTTTCACCA
TGCCTCAAGCCATCCTAGCAGCAGAAGTAGGATGCACGTACATAGCACCA
TACGTGAACCAACTGAGAGTCCATTTCGAGCCAGGATGATTTCCCTCTCC
CTAAGAATCGCCCCTGACATCACCGGCCACATCCACATCCAAACAAACCC
CTACTACTCATACTCCACCGAAAAGACCATCGTCAACGCCCTCCGCAATA
GCCTACAACGAACTCATCAAGCCCGAACATGATGAGCTTCTCCACTCCTC
TCTCACCCAAGCCAAAGCCCTCATCCAAGAATACCCTGGTCTAACCATCG
AAGAACTTGCCATCGAGATAGCATCGCCAAAACCTTTGGTCCCTTTCACG
ACTGCACCTCCAACCAGATGACCATCAAATCTGGACTCGACTACATCCGC
TCTCGCTCCATTGTCGACTGCGACACCATGGACGAGCAAGGCTGTGAATA
TCTTCTGTGATATGCAAGACAAGTTGGTTCAGGTATTCAAGGGGTTGAAT
TGACTTCAAAGACCCCTCCCCCCTCCTCCACTTCAGCGCCCTGGCCCAGA
AATATTACGCCTCCATCGGATCCCAAACACAGGTATTACCCGCTAGTCTG
ACGTCCACGAACGAGATCTTCGCGTTGGCGGGTGTACAGCACATTACTAT
CGCACCGGGATTATTGGAAGAGTTGGCCAAGCCGTTGGAGGGGAAGGTAC
CTGTGGAGTCGTTGTTTGATTCCCCTGCTGTGGTGGAGGGGGCTGTGCCG
GGTAAGGAAGTGTCGTATGTGAATGATGAGTCTGGGTATCGGATTGCGTT
TACGAGGGATGCGGGTGGGTTGAGTGAGGAGAAACTTACTCAGGCATAGT
CAAACTAACCCACCGCCTCTCCCCCACCCACCCCCAATCCCACATCTGCA
TCAAAATCCCCAGCACCTGGGAGGGTCTCAAAGCATGCCAAGTACTCGAA
CAAGCCGGGGTCCGAACCCTAGCCACAACCCTTTTCACCATGCCTCAAGC
CATCCTAGCAGCAGAAGTAGGATGCACGTACATAGCACCATACGTGAACC
AACTGAGAGTCCATTTCGAGCCAGGATGATTTCCCTCTCCCTAAGAATCG
CCCCTGACATCACCGGCCACATCCACATCCAAACAAACCCCTACTACTCA
TACTCCACCGAAAAGACCATCGTCAACGCCCTCCGCAATAGCCTACAACG
AACTCATCAAGCCCGAACATGATGAGCTTCTCCACTCCTCTCTCACCCAA
GCCAAAGCCCTCATCCAAGAATACCCTGGTCTAACCATCGAAGAACTTGC
CATCGAGATAGCATCGCCAAAACCTTTGGTCCCTTTCACGACTGCACCTC
CAACCAGATGACCATCAAATCTGGACTCGACTACATCCGCTCTCGCTCCA
TTGTCGACTGCGACACCATGGACGAGCAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004786KJC3_004786Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004786-T1KJC3_004786-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004786-T1.cdsKJC3_004786-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004786-T1.utr3p1KJC3_004786-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004786-T1.exon7KJC3_004786-T1.exon7Aspergillus niger KJC3exon
KJC3_004786-T1.exon6KJC3_004786-T1.exon6Aspergillus niger KJC3exon
KJC3_004786-T1.exon5KJC3_004786-T1.exon5Aspergillus niger KJC3exon
KJC3_004786-T1.exon4KJC3_004786-T1.exon4Aspergillus niger KJC3exon
KJC3_004786-T1.exon3KJC3_004786-T1.exon3Aspergillus niger KJC3exon
KJC3_004786-T1.exon2KJC3_004786-T1.exon2Aspergillus niger KJC3exon
KJC3_004786-T1.exon1KJC3_004786-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004786-T1.utr5p1KJC3_004786-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR018225
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR001585
DBxrefPFAM:PF00923
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:708708..710318 -
Powered by Drupal