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KJC3_004787-T1, KJC3_004787-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004787-T1
Unique NameKJC3_004787-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:712487..713467+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004787-T1 ID=KJC3_004787-T1|Name=KJC3_004787-T1|organism=Aspergillus niger KJC3|type=mRNA|length=981bp|location=Sequence derived from alignment at ch4:712487..713467+ (Aspergillus niger KJC3)
GGCAGTTCGAGGCCACTTTCTTTCTTGGACGACTACGACGACGACGGTCA
GCTTCGTGTGCCCGATTCAGCCTCTCACTATCTCTTGAGGTCATCAATTT
CATCATGCTCTCTCAGAAGGTTGCTCAGCAATCGTTGCGGCGGCGTACGT
ACTCACATCATCCTCTTCAGCTAATCGCGCGACACTGACTTCAATGTTGC
AGTTGCCGTCCAGCAGCCCTACGCTCTGCGTTGGTCTTTGATGAACTCGG
TTTCTCCGGCTGCCGTTGCTCTTGGAAGAACCGTTCAGACTAGGTAAGCT
ACTACGCGTGATTGGGATTCTTATTTGCGACTATTTCGACTTGGGAGGGG
TTCGCGATATCGAACTCGACGTCATGAAGCGAATGTCGCTAAGTGGAGGC
GGAACACGAATTGCTAACGTTGTCATGCAGACATGCTGCTACCTCCTCCA
ACTCCTCCGACCCTACCAAGCTCCTCGCCCAGCAGCGTCTCAACCGCCCC
GTCTCTCCCCACCTTAGCATCTACCGTCCCCAGATCACATGGATCGGCAG
TAGTATCCACCGTATCACCGGTATTGCGCTGTCCGGAAGTCTCTACCTCT
ATGCCAGTGCCTACCTCGCCTCTCCCATGCTCGGCTGGGATCTGGGCTCT
GCCTCCGCCGCCGCCGCTTTCGCCGCTCTCCCTGTTGTCGCCAAGGTTGC
CCTGAAGACTACCATGGCCCTGCCTTTCACCTACCACTGCATGAACGGCG
TGCGCCACCTCATTTGGGATACTGGTGCTGGTCTTACCAACCCCCAGGTC
ATCAAGTCCGGCTGGACTGTGGTGGGTTTGAGTACTCTTAGCGCTCTTAT
TCTTGCTTTCCTGTGAACTATTGTGACATACCTCTGATTCCTGTTGTGTT
TTAAAATTGTTTTCGTGCAATATATTTTATACCAGTCAATTGACGACTGT
TTTTGGATGAAACTTCACATCTTCTCACCCC
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Coding sequence (CDS) from alignment at ch4:712487..713467+

>KJC3_004787-T1 ID=KJC3_004787-T1|Name=KJC3_004787-T1|organism=Aspergillus niger KJC3|type=CDS|length=1701bp|location=Sequence derived from alignment at ch4:712487..713467+ (Aspergillus niger KJC3)
ATGCTCTCTCAGAAGGTTGCTCAGCAATCGTTGCGGCGGCTTGCCGTCCA
GCAGCCCTACGCTCTGCGTTGGTCTTTGATGAACTCGGTTTCTCCGGCTG
CCGTTGCTCTTGGAAGAACCGTTCAGACTAGACATGCTGCTACCTCCTCC
AACTCCTCCGACCCTACCAAGCTCCTCGCCCAGCAGCGTCTCAACCGCCC
CGTCTCTCCCCACCTTAGCATCTACCGTCCCCAGATCACATGGATCGGCA
GTAGTATCCACCGTATCACCGGTATTGCGCTGTCCGGAAGTCTCTACCTC
TATGCCAGTGCCTACCTCGCCTCTCCCATGCTCGGCTGGGATCTGGGCTC
TGCCTCCGCCGCCGCCGCTTTCGCCGCTCTCCCTGTTGTCGCCAAGGTTG
CCCTGAAGACTACCATGGCCCTGCCTTTCACCTACCACTGCATGAACGGC
GTGCGCCACCTCATTTGGGATACTGGTGCTGGTCTTACCAACCCCCAGGT
CATCAAGTCCGGCTGGACTGTGGTGGGTTTGAGTACTCTTAGCGCTCTTA
TTCTTGCTTTCCTGTGAATGCTCTCTCAGAAGGTTGCTCAGCAATCGTTG
CGGCGGCTTGCCGTCCAGCAGCCCTACGCTCTGCGTTGGTCTTTGATGAA
CTCGGTTTCTCCGGCTGCCGTTGCTCTTGGAAGAACCGTTCAGACTAGAC
ATGCTGCTACCTCCTCCAACTCCTCCGACCCTACCAAGCTCCTCGCCCAG
CAGCGTCTCAACCGCCCCGTCTCTCCCCACCTTAGCATCTACCGTCCCCA
GATCACATGGATCGGCAGTAGTATCCACCGTATCACCGGTATTGCGCTGT
CCGGAAGTCTCTACCTCTATGCCAGTGCCTACCTCGCCTCTCCCATGCTC
GGCTGGGATCTGGGCTCTGCCTCCGCCGCCGCCGCTTTCGCCGCTCTCCC
TGTTGTCGCCAAGGTTGCCCTGAAGACTACCATGGCCCTGCCTTTCACCT
ACCACTGCATGAACGGCGTGCGCCACCTCATTTGGGATACTGGTGCTGGT
CTTACCAACCCCCAGGTCATCAAGTCCGGCTGGACTGTGGTGGGTTTGAG
TACTCTTAGCGCTCTTATTCTTGCTTTCCTGTGAATGCTCTCTCAGAAGG
TTGCTCAGCAATCGTTGCGGCGGCTTGCCGTCCAGCAGCCCTACGCTCTG
CGTTGGTCTTTGATGAACTCGGTTTCTCCGGCTGCCGTTGCTCTTGGAAG
AACCGTTCAGACTAGACATGCTGCTACCTCCTCCAACTCCTCCGACCCTA
CCAAGCTCCTCGCCCAGCAGCGTCTCAACCGCCCCGTCTCTCCCCACCTT
AGCATCTACCGTCCCCAGATCACATGGATCGGCAGTAGTATCCACCGTAT
CACCGGTATTGCGCTGTCCGGAAGTCTCTACCTCTATGCCAGTGCCTACC
TCGCCTCTCCCATGCTCGGCTGGGATCTGGGCTCTGCCTCCGCCGCCGCC
GCTTTCGCCGCTCTCCCTGTTGTCGCCAAGGTTGCCCTGAAGACTACCAT
GGCCCTGCCTTTCACCTACCACTGCATGAACGGCGTGCGCCACCTCATTT
GGGATACTGGTGCTGGTCTTACCAACCCCCAGGTCATCAAGTCCGGCTGG
ACTGTGGTGGGTTTGAGTACTCTTAGCGCTCTTATTCTTGCTTTCCTGTG
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0045281succinate dehydrogenase complex
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron transfer activity
GO:0000104succinate dehydrogenase activity
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004787KJC3_004787Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004787-T1KJC3_004787-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004787-T1.utr5p1KJC3_004787-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004787-T1.exon1KJC3_004787-T1.exon1Aspergillus niger KJC3exon
KJC3_004787-T1.exon2KJC3_004787-T1.exon2Aspergillus niger KJC3exon
KJC3_004787-T1.exon3KJC3_004787-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004787-T1.cdsKJC3_004787-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004787-T1.utr3p1KJC3_004787-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR018495
DBxrefInterPro:IPR014314
DBxrefInterPro:IPR000701
DBxrefInterPro:IPR034804
DBxrefPFAM:PF01127
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:712487..713467 +
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