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KJC3_004812-T1, KJC3_004812-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004812-T1
Unique NameKJC3_004812-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:779453..780716-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004812-T1 ID=KJC3_004812-T1|Name=KJC3_004812-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1264bp|location=Sequence derived from alignment at ch4:779453..780716- (Aspergillus niger KJC3)
CTTGCTCGACCCCGGTGGTTTTGTTTCGAGGGATTGAGTGAGAGTTTCCT
CCGGACTGTATTCTTTTTCTTTCTTTGTGGTCCGTTGAGTATAGATATCT
CCCATAACGATGGCGCAAAACGCCGTGGGAAGGCTCTTCCGCAGCCAGAA
TTCCACTACTCTGCGTCAATCCATCGGGTCGCTCACACAGACGCGCAATG
CTTCGAGAAATGGTATGTCTATTTACCTGCTTGATGTACTCTGGAATTGA
GCAGATGGAGAAACTAACGGACCATCCGCAGCCATCCCTACCTTCCAACA
AACCTCGTCCCCGGAGCTGGACCAAGCCCTCACCCGGTTCCGCGAAGAGC
TCTTCATACCCTTCGGTCTAGGCCAGGACCAACGACGTCTCATGTTTCGG
CAGAAATACGCTGACCGACTGGAGCAAGAGCCAGTGACGGCCAACATAAG
CGAGGACGAAGACTTCCTCCTGCGCCCGATGGACCCGCAATCACGACCGA
CGCTCAAAGAAGCCGCGGAGGTAATCAGCCTGATGCAGAGCAAGGAGGAT
TGGAAGAACCTGGTGCCGTTCCTGTCGGGACTTCAGATGGCCAAGCGGCA
TTTGAAGCCTAGCCGGATGGAGTGGCTTGTGCGGAAGGCGGGCGAACACA
ATGCGCTGAACTTTGTGGTGGAGTGCGCGAAGCAGGCGGACAGGACGGGC
GTGAAGCTGAATGAGGTCGGGATTGTGCAGCGGTTGTTCTTTGAGCTGCA
TCGCAAGGCTCAGAAGGCGGAGTTCCAGGGTCAGGAGGTTACGAAGGCTC
TCAATATGGCGACGCAGTTGGTTGGGTTGATGGAGCGGCCGGCACATGCT
CAGCATGATTTGATGGCTGATCCGAAGAGGAAGCCGTTTGTGTCTGGCAC
ACTGTTGGAATTGAGTGCTGCTAGGGCGCTGAGTGAGTTCGAGGGTAAGG
ATCAGGGTGGTCTGGTGCGCATCTACAGTAGTCGGGTGCTGGGGTGCTGG
AAGATGGGTAACTTTGCTAGTGATGTTCAGGATTGGCGCGCTGTGGATAA
GATGCTGCAGGAGAATGTGCCGATCTATAACGGTATGAAGCTTGCGCTGA
AGGTGCAGGGCATTGCCAATGACAAGGCTGTTGCTCCTGGCTTGAAGAAC
CGCCTCAACGAGCTGGGTCAGTGGATCGCCAAGCAGAAGAAGAGCGCTCC
TGAGGAGATTCAGAAGAACCCTTCGCTGGGTCTGACGCAGGCTCAGCTCT
TGCATGAGAACTAG
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Coding sequence (CDS) from alignment at ch4:779453..780716-

>KJC3_004812-T1 ID=KJC3_004812-T1|Name=KJC3_004812-T1|organism=Aspergillus niger KJC3|type=CDS|length=2172bp|location=Sequence derived from alignment at ch4:779453..780716- (Aspergillus niger KJC3)
CCATCCCTACCTTCCAACAAACCTCGTCCCCGGAGCTGGACCAAGCCCTC
ACCCGGTTCCGCGAAGAGCTCTTCATACCCTTCGGTCTAGGCCAGGACCA
ACGACGTCTCATGTTTCGGCAGAAATACGCTGACCGACTGGAGCAAGAGC
CAGTGACGGCCAACATAAGCGAGGACGAAGACTTCCTCCTGCGCCCGATG
GACCCGCAATCACGACCGACGCTCAAAGAAGCCGCGGAGGTAATCAGCCT
GATGCAGAGCAAGGAGGATTGGAAGAACCTGGTGCCGTTCCTGTCGGGAC
TTCAGATGGCCAAGCGGCATTTGAAGCCTAGCCGGATGGAGTGGCTTGTG
CGGAAGGCGGGCGAACACAATGCGCTGAACTTTGTGGTGGAGTGCGCGAA
GCAGGCGGACAGGACGGGCGTGAAGCTGAATGAGGTCGGGATTGTGCAGC
GGTTGTTCTTTGAGCTGCATCGCAAGGCTCAGAAGGCGGAGTTCCAGGGT
CAGGAGGTTACGAAGGCTCTCAATATGGCGACGCAGTTGGTTGGGTTGAT
GGAGCGGCCGGCACATGCTCAGCATGATTTGATGGCTGATCCGAAGAGGA
AGCCGTTTGTGTCTGGCACACTGTTGGAATTGAGTGCTGCTAGGGCGCTG
AGTGAGTTCGAGGGTAAGGATCAGGGTGGTCTGGTGCGCATCTACAGTAG
TCGGGTGCTGGGGTGCTGGAAGATGGGTAACTTTGCTAGTGATGTTCAGG
ATTGGCGCGCTGTGGATAAGATGCTGCAGGAGAATGTGCCGATCTATAAC
GGTATGAAGCTTGCGCTGAAGGTGCAGGGCATTGCCAATGACAAGGCTGT
TGCTCCTGGCTTGAAGAACCGCCTCAACGAGCTGGGTCAGTGGATCGCCA
AGCAGAAGAAGAGCGCTCCTGAGGAGATTCAGAAGAACCCTTCGCTGGGT
CTGACGCAGGCTCAGCTCTTGCATGAGAACTAGATGGCGCAAAACGCCGT
GGGAAGGCTCTTCCGCAGCCAGAATTCCACTACTCTGCGTCAATCCATCG
GGTCGCTCACACAGACGCGCAATGCTTCGAGAAATGCCATCCCTACCTTC
CAACAAACCTCGTCCCCGGAGCTGGACCAAGCCCTCACCCGGTTCCGCGA
AGAGCTCTTCATACCCTTCGGTCTAGGCCAGGACCAACGACGTCTCATGT
TTCGGCAGAAATACGCTGACCGACTGGAGCAAGAGCCAGTGACGGCCAAC
ATAAGCGAGGACGAAGACTTCCTCCTGCGCCCGATGGACCCGCAATCACG
ACCGACGCTCAAAGAAGCCGCGGAGGTAATCAGCCTGATGCAGAGCAAGG
AGGATTGGAAGAACCTGGTGCCGTTCCTGTCGGGACTTCAGATGGCCAAG
CGGCATTTGAAGCCTAGCCGGATGGAGTGGCTTGTGCGGAAGGCGGGCGA
ACACAATGCGCTGAACTTTGTGGTGGAGTGCGCGAAGCAGGCGGACAGGA
CGGGCGTGAAGCTGAATGAGGTCGGGATTGTGCAGCGGTTGTTCTTTGAG
CTGCATCGCAAGGCTCAGAAGGCGGAGTTCCAGGGTCAGGAGGTTACGAA
GGCTCTCAATATGGCGACGCAGTTGGTTGGGTTGATGGAGCGGCCGGCAC
ATGCTCAGCATGATTTGATGGCTGATCCGAAGAGGAAGCCGTTTGTGTCT
GGCACACTGTTGGAATTGAGTGCTGCTAGGGCGCTGAGTGAGTTCGAGGG
TAAGGATCAGGGTGGTCTGGTGCGCATCTACAGTAGTCGGGTGCTGGGGT
GCTGGAAGATGGGTAACTTTGCTAGTGATGTTCAGGATTGGCGCGCTGTG
GATAAGATGCTGCAGGAGAATGTGCCGATCTATAACGGTATGAAGCTTGC
GCTGAAGGTGCAGGGCATTGCCAATGACAAGGCTGTTGCTCCTGGCTTGA
AGAACCGCCTCAACGAGCTGGGTCAGTGGATCGCCAAGCAGAAGAAGAGC
GCTCCTGAGGAGATTCAGAAGAACCCTTCGCTGGGTCTGACGCAGGCTCA
GCTCTTGCATGAGAACTAGATGGCGCAAAACGCCGTGGGAAGGCTCTTCC
GCAGCCAGAATTCCACTACTCTGCGTCAATCCATCGGGTCGCTCACACAG
ACGCGCAATGCTTCGAGAAATG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004812KJC3_004812Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004812-T1KJC3_004812-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004812-T1.cdsKJC3_004812-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004812-T1.exon2KJC3_004812-T1.exon2Aspergillus niger KJC3exon
KJC3_004812-T1.exon1KJC3_004812-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004812-T1.utr5p1KJC3_004812-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:779453..780716 -
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