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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:815163..818356+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004826-T1 ID=KJC3_004826-T1|Name=KJC3_004826-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3194bp|location=Sequence derived from alignment at ch4:815163..818356+ (Aspergillus niger KJC3)
CCACCTCCTCCCCCATCCCATCCTTCTTCACCAAATACGCAGTCAATGCC
TCCCAAACTCCGCGGCACGCTCTCCAAGAGCCTGTCGCAGATTCAAGACT
CCCCCTCATCCTCCTCATCAGTATTCTACTGCCCGTCTTGTTCCACTTGG
CGCCGTTCCCTCTCCTCGCGTCGAACCCGACTACAATTACCACAGCAACA
ACATCAACAACAATCATGGGCATCCTTGCAGCGTAGCGGCATTGCGACCA
CTTCTGTCGTTCACACAAGATATATCCCTCCCCGATTGAAGGATCTACAT
GAAGCTTTGAACCGGGTCAAGGATGTTGCGCCGGAGCAGGTGAATTTGAG
TCGGTTGCAGCTTGCGTTGAGGGGATTGGAGAGTGAGAAGCCGGTTGTTA
GAGTTGCGGGTAGGTCTTTCTCTTCTCTCTCTCTCTTCTAGTATTTCATG
TTTTGGTTGGGGAATGCTAATGATTGGGCCAGTTCTGGGTTTGAATGATG
CGACTGCGGCGCGCAGGCTCGTTCGGTTGTTGTTAGCGGATCCGTTGAAT
TCGAGGGAGAGCTGGGAGGATGCATTGGATGCGTATGGTGAGGATACGGA
GAGGGGATTGTTGATTCGGTAGGTCCACATTTACAAACACATGGTATTAA
GAATGGGGGGCTAGGTACTAAGATATATGCAGGTACGGCGAAGTCTCCGA
AACAATCCCCAACGATCTCCTCCCTACGATCTCGGTGCCCTCGCCCATTC
TGAAGAAGGGAAATTTGGAAATCCTCGTTACGACGCTCGGTGCTGAGTCG
GCTGGAGTCGCGGACGCTACTCAGTCTCACCCGTTCACGGCTGACACCTT
CCTCGTGCCTACGGTTACGATCCGCACGTCGCATTCCGGCCGGCATAATA
TGGTGCGGTATCCTGTGCATCGGAGCATTGTATGCGGTAGCGGTGTCGAT
GGGTTTCTGGCGTATAGCGGGCTGATGGCGCGGTCGGACTTGAAGAAAGA
AGCTGTGTCGGTCTTTGGGGCTATTGAGCTGGCGGTCACGGAGCCACAGA
AGTACGACGGCCGGGTCGCGTTCGTGGACATTGACAAGGCGGATGAGGCG
TTGGCAACATTCCGAGAGTCAGTGCAGAATGCGTCGCTCTACGAACGCGG
CTGGAACAGCAGTGGTGTGCAGCCAGTGGTGGACTGGTTGTCTTCGCTGC
GAGCTGAGGAAGGGACGCTGGATCCGTCCTTGCGGACGTTGATCACTTCT
CTTTTGGATGCCGCGGAGGCGGGTGCAGCCGCTGCTGAGAAGAGAAAGCT
GTTGGAGCAGGAGAGTGGCGCTGTGTCGTGGGAGACTCGCGATATGCTTG
AACGATCCGTGTCCGAGTGGGCGGAGCGCGGGCACACGGAGCTCCGCAGC
TCACTCGAGGAAGGGTTTGCCAGCAAGCCGTGGCGCGGACTGGCTTGGTG
GAAGCTGTTCTGGCATGTGGACGACGTGGGAATGATCACGTCGGAGATTC
TGGACCGGAAGTACCTGCGTCAGGCCGAGAAAGAGGTCATCTGGACTGCC
GGCCGGTTCCAGCAGGCCGGATTGACCGATGCGACTCCCATGCAAGAGGA
GCAGACGTCCTGGCCAGCACAGATTGCGACCAGTCGTCGCCGGCTCATGG
AGACGACAGTGCCGTCGCTGCAGGCATTGGCGCAGCGTCTGGTCTTGTTT
AGCATGTCCACGACCACCCTGACCTCGGCATTGTCAGCGCTAACCTACGT
CTCGCTGCCGGCTGCCACCATCTACGAGACCTGCACGATGGCCGCCATCG
GTTTGATCTACTCGCTACGCCGCCAACAGCGCAAGTGGGAGTCCGCGCGA
CACTGGTTCGAGAACGAAGTGCGCGAAGACGGCCGCACCGCGCTGCTGGA
GACGGAGACGCAGCTGCGCGAGACCGCCCGCGAGGGTGGCCGACAGGTCG
AAGAGGTGACGGCGGAGAAGGACGCCAGAGAGACGATCGAGCGCGCACGC
GCAGCTCTGAAGGAGCTCCAGTAGAGGCAGTTGCCAGCAGATAGGGTACC
TAGCTAAGCATGTCATGTACAATAGACTCATCCCATCATCCACCTTCCCA
TATCTGACCCATAACTTAATCCCCCCCTAACTAAGTTCAATACTCCCCTC
CGGTACCCCCTTATAACTCCTCAACCTCCTCGCCAAAAACTCCATCACGG
GTCTCATCTCATCCGCATTCCGGGGCATCCCATCCCCGCGCCTCTTATAC
CTGCTCACCTCAACGAACTCAAACCACTCCTTCGTCCTCCTCACGCCCGC
AGCACTCACAGCCGTACTCCTCTCCCCTCCATCTTCCTTCCCCGCAACAA
CCAACACCGGCGTCCTACTCTTCCCAGTCCCAGACGCAGGTGCTTTCCCA
GATAACCCCACCGGCGCCCCAATCGACACCACACCTCCCAGTTCCCGATC
CCCATCTTTAACCCCCTCCGAAAAATCCTTAAAGTGTCTAGCAACCTCCA
ACCCCACCATCCCCCCCTGCCCGATCCCAAACACTATGATATCCCGTCCC
CTGTATCCGCACTTCTTCAGTAACGTATCGACAATCACCTCCTGTATGAT
TGTCTTCGTGGAGCGACTGAACCCGGCGTCCATGTCGAGGTCCCCCGCGG
GGCTAAATGTGATGTCGTCGCCCCAGTGGAAGCCGCCTAGGTCGAAGGGG
AGCGGGGTCGGCGCTTGGAGGGTCAGGATGGTGGTTTCGGGGAGGTTGAG
GGCGCGGGCGAGCGTGCTGAGGTTTTGGCTTGTGTCGCCGATGCCGTGGA
GGAGGAGGAGGATGTTGGGGGAGGATTGAGAGGTGGTAGAGTAGGAGGAT
GATGGGGGGGTGATGGTTAGGGTTAGATGTGAGGGGAAGTGCGAGGGGGT
TGGGGGTGTAGGCATTTTGATTGTGGTTTGACTTGGAGATGAGGTGGTTT
AGAGGGAGGAACAGGAGTTGTAGATGGTCAAGTCGTGTGAGTCTTGTGGT
TGTAGTTGTGGTGGTGGGAGACAGTAGTGTGAGGTTGGCGGGGTTGTTTG
GTTTTAATCCGGAGTGTTGTGGTGGTTGTGTAATGGGTTCGTAGAGGATA
ATAATACGATAAGTGTTATATAATTTGTATATCGCTCGTAGTAGGTATAG
ATTCTTTGGGGTTGTTATAGCATGTAGTCGTAACGATATAGAAA back to topCoding sequence (CDS) from alignment at ch4:815163..818356+ >KJC3_004826-T1 ID=KJC3_004826-T1|Name=KJC3_004826-T1|organism=Aspergillus niger KJC3|type=CDS|length=5526bp|location=Sequence derived from alignment at ch4:815163..818356+ (Aspergillus niger KJC3)
ATGCCTCCCAAACTCCGCGGCACGCTCTCCAAGAGCCTGTCGCAGATTCA
AGACTCCCCCTCATCCTCCTCATCAGTATTCTACTGCCCGTCTTGTTCCA
CTTGGCGCCGTTCCCTCTCCTCGCGTCGAACCCGACTACAATTACCACAG
CAACAACATCAACAACAATCATGGGCATCCTTGCAGCGTAGCGGCATTGC
GACCACTTCTGTCGTTCACACAAGATATATCCCTCCCCGATTGAAGGATC
TACATGAAGCTTTGAACCGGGTCAAGGATGTTGCGCCGGAGCAGGTGAAT
TTGAGTCGGTTGCAGCTTGCGTTGAGGGGATTGGAGAGTGAGAAGCCGGT
TGTTAGAGTTGCGGTTCTGGGTTTGAATGATGCGACTGCGGCGCGCAGGC
TCGTTCGGTTGTTGTTAGCGGATCCGTTGAATTCGAGGGAGAGCTGGGAG
GATGCATTGGATGCGTATGGTGAGGATACGGAGAGGGGATTGTTGATTCG
GTACGGCGAAGTCTCCGAAACAATCCCCAACGATCTCCTCCCTACGATCT
CGGTGCCCTCGCCCATTCTGAAGAAGGGAAATTTGGAAATCCTCGTTACG
ACGCTCGGTGCTGAGTCGGCTGGAGTCGCGGACGCTACTCAGTCTCACCC
GTTCACGGCTGACACCTTCCTCGTGCCTACGGTTACGATCCGCACGTCGC
ATTCCGGCCGGCATAATATGGTGCGGTATCCTGTGCATCGGAGCATTGTA
TGCGGTAGCGGTGTCGATGGGTTTCTGGCGTATAGCGGGCTGATGGCGCG
GTCGGACTTGAAGAAAGAAGCTGTGTCGGTCTTTGGGGCTATTGAGCTGG
CGGTCACGGAGCCACAGAAGTACGACGGCCGGGTCGCGTTCGTGGACATT
GACAAGGCGGATGAGGCGTTGGCAACATTCCGAGAGTCAGTGCAGAATGC
GTCGCTCTACGAACGCGGCTGGAACAGCAGTGGTGTGCAGCCAGTGGTGG
ACTGGTTGTCTTCGCTGCGAGCTGAGGAAGGGACGCTGGATCCGTCCTTG
CGGACGTTGATCACTTCTCTTTTGGATGCCGCGGAGGCGGGTGCAGCCGC
TGCTGAGAAGAGAAAGCTGTTGGAGCAGGAGAGTGGCGCTGTGTCGTGGG
AGACTCGCGATATGCTTGAACGATCCGTGTCCGAGTGGGCGGAGCGCGGG
CACACGGAGCTCCGCAGCTCACTCGAGGAAGGGTTTGCCAGCAAGCCGTG
GCGCGGACTGGCTTGGTGGAAGCTGTTCTGGCATGTGGACGACGTGGGAA
TGATCACGTCGGAGATTCTGGACCGGAAGTACCTGCGTCAGGCCGAGAAA
GAGGTCATCTGGACTGCCGGCCGGTTCCAGCAGGCCGGATTGACCGATGC
GACTCCCATGCAAGAGGAGCAGACGTCCTGGCCAGCACAGATTGCGACCA
GTCGTCGCCGGCTCATGGAGACGACAGTGCCGTCGCTGCAGGCATTGGCG
CAGCGTCTGGTCTTGTTTAGCATGTCCACGACCACCCTGACCTCGGCATT
GTCAGCGCTAACCTACGTCTCGCTGCCGGCTGCCACCATCTACGAGACCT
GCACGATGGCCGCCATCGGTTTGATCTACTCGCTACGCCGCCAACAGCGC
AAGTGGGAGTCCGCGCGACACTGGTTCGAGAACGAAGTGCGCGAAGACGG
CCGCACCGCGCTGCTGGAGACGGAGACGCAGCTGCGCGAGACCGCCCGCG
AGGGTGGCCGACAGGTCGAAGAGGTGACGGCGGAGAAGGACGCCAGAGAG
ACGATCGAGCGCGCACGCGCAGCTCTGAAGGAGCTCCAGTAGATGCCTCC
CAAACTCCGCGGCACGCTCTCCAAGAGCCTGTCGCAGATTCAAGACTCCC
CCTCATCCTCCTCATCAGTATTCTACTGCCCGTCTTGTTCCACTTGGCGC
CGTTCCCTCTCCTCGCGTCGAACCCGACTACAATTACCACAGCAACAACA
TCAACAACAATCATGGGCATCCTTGCAGCGTAGCGGCATTGCGACCACTT
CTGTCGTTCACACAAGATATATCCCTCCCCGATTGAAGGATCTACATGAA
GCTTTGAACCGGGTCAAGGATGTTGCGCCGGAGCAGGTGAATTTGAGTCG
GTTGCAGCTTGCGTTGAGGGGATTGGAGAGTGAGAAGCCGGTTGTTAGAG
TTGCGGTTCTGGGTTTGAATGATGCGACTGCGGCGCGCAGGCTCGTTCGG
TTGTTGTTAGCGGATCCGTTGAATTCGAGGGAGAGCTGGGAGGATGCATT
GGATGCGTATGGTGAGGATACGGAGAGGGGATTGTTGATTCGGTACGGCG
AAGTCTCCGAAACAATCCCCAACGATCTCCTCCCTACGATCTCGGTGCCC
TCGCCCATTCTGAAGAAGGGAAATTTGGAAATCCTCGTTACGACGCTCGG
TGCTGAGTCGGCTGGAGTCGCGGACGCTACTCAGTCTCACCCGTTCACGG
CTGACACCTTCCTCGTGCCTACGGTTACGATCCGCACGTCGCATTCCGGC
CGGCATAATATGGTGCGGTATCCTGTGCATCGGAGCATTGTATGCGGTAG
CGGTGTCGATGGGTTTCTGGCGTATAGCGGGCTGATGGCGCGGTCGGACT
TGAAGAAAGAAGCTGTGTCGGTCTTTGGGGCTATTGAGCTGGCGGTCACG
GAGCCACAGAAGTACGACGGCCGGGTCGCGTTCGTGGACATTGACAAGGC
GGATGAGGCGTTGGCAACATTCCGAGAGTCAGTGCAGAATGCGTCGCTCT
ACGAACGCGGCTGGAACAGCAGTGGTGTGCAGCCAGTGGTGGACTGGTTG
TCTTCGCTGCGAGCTGAGGAAGGGACGCTGGATCCGTCCTTGCGGACGTT
GATCACTTCTCTTTTGGATGCCGCGGAGGCGGGTGCAGCCGCTGCTGAGA
AGAGAAAGCTGTTGGAGCAGGAGAGTGGCGCTGTGTCGTGGGAGACTCGC
GATATGCTTGAACGATCCGTGTCCGAGTGGGCGGAGCGCGGGCACACGGA
GCTCCGCAGCTCACTCGAGGAAGGGTTTGCCAGCAAGCCGTGGCGCGGAC
TGGCTTGGTGGAAGCTGTTCTGGCATGTGGACGACGTGGGAATGATCACG
TCGGAGATTCTGGACCGGAAGTACCTGCGTCAGGCCGAGAAAGAGGTCAT
CTGGACTGCCGGCCGGTTCCAGCAGGCCGGATTGACCGATGCGACTCCCA
TGCAAGAGGAGCAGACGTCCTGGCCAGCACAGATTGCGACCAGTCGTCGC
CGGCTCATGGAGACGACAGTGCCGTCGCTGCAGGCATTGGCGCAGCGTCT
GGTCTTGTTTAGCATGTCCACGACCACCCTGACCTCGGCATTGTCAGCGC
TAACCTACGTCTCGCTGCCGGCTGCCACCATCTACGAGACCTGCACGATG
GCCGCCATCGGTTTGATCTACTCGCTACGCCGCCAACAGCGCAAGTGGGA
GTCCGCGCGACACTGGTTCGAGAACGAAGTGCGCGAAGACGGCCGCACCG
CGCTGCTGGAGACGGAGACGCAGCTGCGCGAGACCGCCCGCGAGGGTGGC
CGACAGGTCGAAGAGGTGACGGCGGAGAAGGACGCCAGAGAGACGATCGA
GCGCGCACGCGCAGCTCTGAAGGAGCTCCAGTAGATGCCTCCCAAACTCC
GCGGCACGCTCTCCAAGAGCCTGTCGCAGATTCAAGACTCCCCCTCATCC
TCCTCATCAGTATTCTACTGCCCGTCTTGTTCCACTTGGCGCCGTTCCCT
CTCCTCGCGTCGAACCCGACTACAATTACCACAGCAACAACATCAACAAC
AATCATGGGCATCCTTGCAGCGTAGCGGCATTGCGACCACTTCTGTCGTT
CACACAAGATATATCCCTCCCCGATTGAAGGATCTACATGAAGCTTTGAA
CCGGGTCAAGGATGTTGCGCCGGAGCAGGTGAATTTGAGTCGGTTGCAGC
TTGCGTTGAGGGGATTGGAGAGTGAGAAGCCGGTTGTTAGAGTTGCGGTT
CTGGGTTTGAATGATGCGACTGCGGCGCGCAGGCTCGTTCGGTTGTTGTT
AGCGGATCCGTTGAATTCGAGGGAGAGCTGGGAGGATGCATTGGATGCGT
ATGGTGAGGATACGGAGAGGGGATTGTTGATTCGGTACGGCGAAGTCTCC
GAAACAATCCCCAACGATCTCCTCCCTACGATCTCGGTGCCCTCGCCCAT
TCTGAAGAAGGGAAATTTGGAAATCCTCGTTACGACGCTCGGTGCTGAGT
CGGCTGGAGTCGCGGACGCTACTCAGTCTCACCCGTTCACGGCTGACACC
TTCCTCGTGCCTACGGTTACGATCCGCACGTCGCATTCCGGCCGGCATAA
TATGGTGCGGTATCCTGTGCATCGGAGCATTGTATGCGGTAGCGGTGTCG
ATGGGTTTCTGGCGTATAGCGGGCTGATGGCGCGGTCGGACTTGAAGAAA
GAAGCTGTGTCGGTCTTTGGGGCTATTGAGCTGGCGGTCACGGAGCCACA
GAAGTACGACGGCCGGGTCGCGTTCGTGGACATTGACAAGGCGGATGAGG
CGTTGGCAACATTCCGAGAGTCAGTGCAGAATGCGTCGCTCTACGAACGC
GGCTGGAACAGCAGTGGTGTGCAGCCAGTGGTGGACTGGTTGTCTTCGCT
GCGAGCTGAGGAAGGGACGCTGGATCCGTCCTTGCGGACGTTGATCACTT
CTCTTTTGGATGCCGCGGAGGCGGGTGCAGCCGCTGCTGAGAAGAGAAAG
CTGTTGGAGCAGGAGAGTGGCGCTGTGTCGTGGGAGACTCGCGATATGCT
TGAACGATCCGTGTCCGAGTGGGCGGAGCGCGGGCACACGGAGCTCCGCA
GCTCACTCGAGGAAGGGTTTGCCAGCAAGCCGTGGCGCGGACTGGCTTGG
TGGAAGCTGTTCTGGCATGTGGACGACGTGGGAATGATCACGTCGGAGAT
TCTGGACCGGAAGTACCTGCGTCAGGCCGAGAAAGAGGTCATCTGGACTG
CCGGCCGGTTCCAGCAGGCCGGATTGACCGATGCGACTCCCATGCAAGAG
GAGCAGACGTCCTGGCCAGCACAGATTGCGACCAGTCGTCGCCGGCTCAT
GGAGACGACAGTGCCGTCGCTGCAGGCATTGGCGCAGCGTCTGGTCTTGT
TTAGCATGTCCACGACCACCCTGACCTCGGCATTGTCAGCGCTAACCTAC
GTCTCGCTGCCGGCTGCCACCATCTACGAGACCTGCACGATGGCCGCCAT
CGGTTTGATCTACTCGCTACGCCGCCAACAGCGCAAGTGGGAGTCCGCGC
GACACTGGTTCGAGAACGAAGTGCGCGAAGACGGCCGCACCGCGCTGCTG
GAGACGGAGACGCAGCTGCGCGAGACCGCCCGCGAGGGTGGCCGACAGGT
CGAAGAGGTGACGGCGGAGAAGGACGCCAGAGAGACGATCGAGCGCGCAC
GCGCAGCTCTGAAGGAGCTCCAGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004826-T1.utr5p1 | KJC3_004826-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004826-T1.utr3p1 | KJC3_004826-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:815163..818356 + |
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