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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:831390..832774+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004832-T1 ID=KJC3_004832-T1|Name=KJC3_004832-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1385bp|location=Sequence derived from alignment at ch4:831390..832774+ (Aspergillus niger KJC3)
TCTTAGTATTTATCAACCCCTACATAAGACCACAGCGGTCTAACTCTGCT
ACCCTCAAGTTCCCGCACACAATCATCCTCTTCTTCTTGAATAATCAGAT
AATTGTCAACATGTCGTTTTCCATCGATGCTGGAGGTACCAACCCTTTCA
GCATAAGCGTAGACAGAACCCCTTTAGTCCTGGATGAGTCGACACGCATC
CTCTACAACCGCGCTATATCCAACCCCTCCTCACTAACGGATCAAGAACG
TCGACTCATCACCCACCGCCCCCCACCAGACGAGGAAGACACCCTCTGTC
GAAATGCCTGCGGCTTGCCCATGGGCGAGCTCGTTACCAAAGCCATCAAT
AGCAGCAACAACAATGGCAGTAACAATGATGGCTTCCCTCTTAGCAGCCT
TGGCCTGAGCTATAAAGAAGCCAGTCTCTTAACGGCCGGCGTAGCCGAAG
GACAATCGGGCCATATCCTGTTCGAGATGGCGCGCCTTTCTCCTGAAGAT
CGGGACCTCAAGGCTCGAGCTATGAAAGCAGCGACGACAGACAATATTCG
GACTGCTAGGGAGGCGGCGCAGAGGGTTGAGCAGCGATGGCTAAAGGTGG
AACTGGCGGCGGCCAAGGCGCTGAACGATGATGACATTAAGAATATTCGG
TTTGCGATGAAGGTTCCTTGGCAGGAGCACGTACTGCAATCCAGCTCAGC
TTCAGCGCGTGATTATGCTCCTGGTTCTGATTCTGGCCCTGGGGAAGCAG
GTCGTCGCTTTGGTCTCGTGGTATTCTACATGAAAGAAGAAGACGAAGGA
GGCCGACTATCAGAGTATAAATCCCTGGTTGGAACGGCTGTTTACCACGG
ACTACACTATTCACCGAGACTGATTAAGGACGAAACGAGAGACCGGTTCA
CATTGAATTGGGTGGCTGTTCCAGGTAGTAATAGCAGCATGGACCCGAGT
GCACTACGGAGCAAGTTCAGTACAATGCTCTCAAACAACGAGATTCCTGC
TGGCTTTCGACGCGATGTATTTCTCTACGTGGATGACGAGGCGTTCCGCT
CGCGTGAAACAATACGGCCATATCTCTGGTTGGCTGAGCCTGCACCCCAT
TCCGAGTTAAAGACAGAGCGAGAGCCAGAGCCTGGAACTGAGACTGGAAC
CGGGACCGGAGCTGCGACTGGAGCTCAGCCTGAGGCTTTGCAACCCCTAA
AAGTCGACATTAAGCATATCGCCCCGACATTGTTTGCGCGGTTGGTTCAG
CGCGATCTTCAGGGCGAGGCGAGACGGAAGCCCTATCGGCATACCTCGGA
GCTGATCAGGTTGCATGCGGCCGCCAATGCGAGATATAGAGAGGAAAGAG
ATGGGGTTTGGCCGCCACCTGCTCGGTTCCAGTAG back to topCoding sequence (CDS) from alignment at ch4:831390..832774+ >KJC3_004832-T1 ID=KJC3_004832-T1|Name=KJC3_004832-T1|organism=Aspergillus niger KJC3|type=CDS|length=1275bp|location=Sequence derived from alignment at ch4:831390..832774+ (Aspergillus niger KJC3)
ATGTCGTTTTCCATCGATGCTGGAGGTACCAACCCTTTCAGCATAAGCGT
AGACAGAACCCCTTTAGTCCTGGATGAGTCGACACGCATCCTCTACAACC
GCGCTATATCCAACCCCTCCTCACTAACGGATCAAGAACGTCGACTCATC
ACCCACCGCCCCCCACCAGACGAGGAAGACACCCTCTGTCGAAATGCCTG
CGGCTTGCCCATGGGCGAGCTCGTTACCAAAGCCATCAATAGCAGCAACA
ACAATGGCAGTAACAATGATGGCTTCCCTCTTAGCAGCCTTGGCCTGAGC
TATAAAGAAGCCAGTCTCTTAACGGCCGGCGTAGCCGAAGGACAATCGGG
CCATATCCTGTTCGAGATGGCGCGCCTTTCTCCTGAAGATCGGGACCTCA
AGGCTCGAGCTATGAAAGCAGCGACGACAGACAATATTCGGACTGCTAGG
GAGGCGGCGCAGAGGGTTGAGCAGCGATGGCTAAAGGTGGAACTGGCGGC
GGCCAAGGCGCTGAACGATGATGACATTAAGAATATTCGGTTTGCGATGA
AGGTTCCTTGGCAGGAGCACGTACTGCAATCCAGCTCAGCTTCAGCGCGT
GATTATGCTCCTGGTTCTGATTCTGGCCCTGGGGAAGCAGGTCGTCGCTT
TGGTCTCGTGGTATTCTACATGAAAGAAGAAGACGAAGGAGGCCGACTAT
CAGAGTATAAATCCCTGGTTGGAACGGCTGTTTACCACGGACTACACTAT
TCACCGAGACTGATTAAGGACGAAACGAGAGACCGGTTCACATTGAATTG
GGTGGCTGTTCCAGGTAGTAATAGCAGCATGGACCCGAGTGCACTACGGA
GCAAGTTCAGTACAATGCTCTCAAACAACGAGATTCCTGCTGGCTTTCGA
CGCGATGTATTTCTCTACGTGGATGACGAGGCGTTCCGCTCGCGTGAAAC
AATACGGCCATATCTCTGGTTGGCTGAGCCTGCACCCCATTCCGAGTTAA
AGACAGAGCGAGAGCCAGAGCCTGGAACTGAGACTGGAACCGGGACCGGA
GCTGCGACTGGAGCTCAGCCTGAGGCTTTGCAACCCCTAAAAGTCGACAT
TAAGCATATCGCCCCGACATTGTTTGCGCGGTTGGTTCAGCGCGATCTTC
AGGGCGAGGCGAGACGGAAGCCCTATCGGCATACCTCGGAGCTGATCAGG
TTGCATGCGGCCGCCAATGCGAGATATAGAGAGGAAAGAGATGGGGTTTG
GCCGCCACCTGCTCGGTTCCAGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004832-T1.utr5p1 | KJC3_004832-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:831390..832774 + |
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